RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 KCTD17Q8N5Z5 321 aa6.54□□□□□ -1.36
LINC00428-201ENST00000415620 KRI1Q8N9T8 703 aaKnown RBP6.54□□□□□ -1.36
LINC00428-201ENST00000415620 ZNF511Q8NB15 262 aa6.54□□□□□ -1.36
LINC00428-201ENST00000415620 PCDHGC3Q9UN70 934 aa6.54□□□□□ -1.36
LINC00428-201ENST00000415620 MAN1A2O60476 641 aa6.53□□□□□ -1.36
LINC00428-201ENST00000415620 TMEM151AQ8N4L1 468 aa6.52□□□□□ -1.37
LINC00428-201ENST00000415620 FAM174AQ8TBP5 190 aa6.52□□□□□ -1.37
LINC00428-201ENST00000415620 TULP1O00294 542 aaPredicted RBP6.51□□□□□ -1.37
LINC00428-201ENST00000415620 KLF16Q9BXK1 252 aaPredicted RBP6.51□□□□□ -1.37
LINC00428-201ENST00000415620 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
LINC00428-201ENST00000415620 UPP2O95045 317 aa6.5□□□□□ -1.37
LINC00428-201ENST00000415620 HAP1P54257 671 aaPredicted RBP6.5□□□□□ -1.37
LINC00428-201ENST00000415620 DESI1Q6ICB0 168 aa6.5□□□□□ -1.37
LINC00428-201ENST00000415620 PRR7Q8TB68 274 aa6.5□□□□□ -1.37
LINC00428-201ENST00000415620 SPDYE5A6NIY4 337 aa6.49□□□□□ -1.37
LINC00428-201ENST00000415620 RNF225M0QZC1 329 aaPredicted RBP6.49□□□□□ -1.37
LINC00428-201ENST00000415620 GDF11O95390 407 aa6.49□□□□□ -1.37
LINC00428-201ENST00000415620 ZIC2O95409 532 aaPredicted RBP6.49□□□□□ -1.37
LINC00428-201ENST00000415620 C6orf118Q5T5N4 469 aa6.49□□□□□ -1.37
LINC00428-201ENST00000415620 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
LINC00428-201ENST00000415620 GSK3AP49840 483 aa6.48□□□□□ -1.37
LINC00428-201ENST00000415620 RASSF7Q02833 373 aa6.48□□□□□ -1.37
LINC00428-201ENST00000415620 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
LINC00428-201ENST00000415620 CDK15Q96Q40 435 aa6.48□□□□□ -1.37
LINC00428-201ENST00000415620 BMP2P12643 396 aa6.47□□□□□ -1.37
LINC00428-201ENST00000415620 SSTR3P32745 418 aaPredicted RBP6.47□□□□□ -1.37
LINC00428-201ENST00000415620 CTHP32929 405 aa6.47□□□□□ -1.37
LINC00428-201ENST00000415620 NR5A1Q13285 461 aa6.47□□□□□ -1.37
LINC00428-201ENST00000415620 MTMR2Q13614 643 aa6.47□□□□□ -1.37
LINC00428-201ENST00000415620 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
LINC00428-201ENST00000415620 MOXD2PA6NHM9 499 aa6.46□□□□□ -1.38
LINC00428-201ENST00000415620 SPTLC1O15269 473 aa6.46□□□□□ -1.38
LINC00428-201ENST00000415620 NDUFV2P19404 249 aa6.46□□□□□ -1.38
LINC00428-201ENST00000415620 ITPKCQ96DU7 683 aa6.46□□□□□ -1.38
LINC00428-201ENST00000415620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.45□□□□□ -1.38
LINC00428-201ENST00000415620 LINC00528Q8N1L1 170 aa6.45□□□□□ -1.38
LINC00428-201ENST00000415620 ADAMTS8Q9UP79 889 aa6.45□□□□□ -1.38
LINC00428-201ENST00000415620 GJA5P36382 358 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 AGERQ15109 404 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 AMHR2Q16671 573 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 LYPD8Q6UX82 237 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 VSIG10Q8N0Z9 540 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 FOXJ1Q92949 421 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 CNTNAP3BQ96NU0 1288 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 CNTNAP3Q9BZ76 1288 aa6.44□□□□□ -1.38
LINC00428-201ENST00000415620 NR3C2P08235 984 aa6.43□□□□□ -1.38
LINC00428-201ENST00000415620 SOS2Q07890 1332 aaPredicted RBP6.43□□□□□ -1.38
LINC00428-201ENST00000415620 GRM5P41594 1212 aa6.42□□□□□ -1.38
LINC00428-201ENST00000415620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.42□□□□□ -1.38
LINC00428-201ENST00000415620 BARGINQ6ZT62 677 aa6.42□□□□□ -1.38
LINC00428-201ENST00000415620 BPHLQ86WA6 291 aaPredicted RBP6.42□□□□□ -1.38
LINC00428-201ENST00000415620 MEIOBQ8N635 442 aa6.42□□□□□ -1.38
LINC00428-201ENST00000415620 KRT76Q01546 638 aa6.41□□□□□ -1.38
LINC00428-201ENST00000415620 GPR161Q8N6U8 529 aaKnown RBP6.41□□□□□ -1.38
LINC00428-201ENST00000415620 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
LINC00428-201ENST00000415620 DNMT3LQ9UJW3 386 aa6.41□□□□□ -1.38
LINC00428-201ENST00000415620 ZMYND10O75800 440 aa6.4□□□□□ -1.38
LINC00428-201ENST00000415620 F12P00748 615 aaPredicted RBP6.4□□□□□ -1.38
LINC00428-201ENST00000415620 IGHA1P01876 353 aa6.4□□□□□ -1.38
LINC00428-201ENST00000415620 GIGYF2Q6Y7W6 1299 aaKnown RBP6.4□□□□□ -1.38
LINC00428-201ENST00000415620 COL25A1Q9BXS0 654 aaPredicted RBP6.4□□□□□ -1.38
LINC00428-201ENST00000415620 DIXDC1Q155Q3 683 aa6.39□□□□□ -1.39
LINC00428-201ENST00000415620 RSBN1LQ6PCB5 846 aaPredicted RBP6.39□□□□□ -1.39
LINC00428-201ENST00000415620 SVOPQ8N4V2 548 aa6.39□□□□□ -1.39
LINC00428-201ENST00000415620 TTLL8A6PVC2 850 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 CFAP99D6REC4 459 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 PTSQ03393 145 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 TTLL12Q14166 644 aaPredicted RBP6.38□□□□□ -1.39
LINC00428-201ENST00000415620 ZNF385CQ66K41 422 aaPredicted RBP6.38□□□□□ -1.39
LINC00428-201ENST00000415620 GPAT2Q6NUI2 795 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 ARMC2Q8NEN0 867 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 NANOS1Q8WY41 292 aaKnown RBP6.38□□□□□ -1.39
LINC00428-201ENST00000415620 BEGAINQ9BUH8 593 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 TBC1D2Q9BYX2 928 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 MAP10Q9P2G4 905 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 EMILIN1Q9Y6C2 1016 aa6.38□□□□□ -1.39
LINC00428-201ENST00000415620 DNMT3AQ9Y6K1 912 aaPredicted RBP6.38□□□□□ -1.39
LINC00428-201ENST00000415620 IRS1P35568 1242 aa6.37□□□□□ -1.39
LINC00428-201ENST00000415620 MARSP56192 900 aaKnown RBP6.37□□□□□ -1.39
LINC00428-201ENST00000415620 FOXK2Q01167 660 aa6.37□□□□□ -1.39
LINC00428-201ENST00000415620 C4orf48Q5BLP8 95 aa6.37□□□□□ -1.39
LINC00428-201ENST00000415620 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
LINC00428-201ENST00000415620 HRCP23327 699 aa6.36□□□□□ -1.39
LINC00428-201ENST00000415620 FSHRP23945 695 aa6.36□□□□□ -1.39
LINC00428-201ENST00000415620 KANK3Q6NY19 840 aa6.36□□□□□ -1.39
LINC00428-201ENST00000415620 VASH1Q7L8A9 365 aaPredicted RBP6.36□□□□□ -1.39
LINC00428-201ENST00000415620 CCDC155Q8N6L0 562 aa6.36□□□□□ -1.39
LINC00428-201ENST00000415620 ZBTB3Q9H5J0 574 aa6.36□□□□□ -1.39
LINC00428-201ENST00000415620 MAP4K5Q9Y4K4 846 aa6.36□□□□□ -1.39
LINC00428-201ENST00000415620 FIGNL2A6NMB9 653 aa6.35□□□□□ -1.39
LINC00428-201ENST00000415620 PRPF38BQ5VTL8 546 aaKnown RBP6.35□□□□□ -1.39
LINC00428-201ENST00000415620 PARP9Q8IXQ6 854 aa6.35□□□□□ -1.39
LINC00428-201ENST00000415620 CCDC116Q8IYX3 515 aa6.35□□□□□ -1.39
LINC00428-201ENST00000415620 SCARF2Q96GP6 870 aaPredicted RBP6.35□□□□□ -1.39
LINC00428-201ENST00000415620 ARHGEF15O94989 841 aa6.34□□□□□ -1.39
LINC00428-201ENST00000415620 SLURP2P0DP57 97 aa6.34□□□□□ -1.39
LINC00428-201ENST00000415620 RNFT1Q5M7Z0 435 aa6.34□□□□□ -1.39
LINC00428-201ENST00000415620 SV2AQ7L0J3 742 aa6.34□□□□□ -1.39
LINC00428-201ENST00000415620 ZC3H15Q8WU90 426 aaKnown RBP6.34□□□□□ -1.39
LINC00428-201ENST00000415620 C1QTNF2Q9BXJ5 285 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms