RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 FTSJ3Q8IY81 847 aaKnown RBP24.88■■□□□ 1.57
C2CD3-205ENST00000415191 EXOSC9Q06265 439 aaKnown RBP24.88■■□□□ 1.57
C2CD3-205ENST00000415191 TRIM35Q9UPQ4 493 aa24.88■■□□□ 1.57
C2CD3-205ENST00000415191 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
C2CD3-205ENST00000415191 RWDD1Q9H446 243 aaPredicted RBP24.87■■□□□ 1.57
C2CD3-205ENST00000415191 PDZRN3Q9UPQ7 1066 aa24.87■■□□□ 1.57
C2CD3-205ENST00000415191 CT47B1P0C2W7 299 aaPredicted RBP24.87■■□□□ 1.57
C2CD3-205ENST00000415191 DZIP1LQ8IYY4 767 aaKnown RBP24.87■■□□□ 1.57
C2CD3-205ENST00000415191 SMC4Q9NTJ3 1288 aa24.86■■□□□ 1.57
C2CD3-205ENST00000415191 MED14O60244 1454 aa24.86■■□□□ 1.57
C2CD3-205ENST00000415191 HDGFL2Q7Z4V5 671 aaPredicted RBP24.86■■□□□ 1.57
C2CD3-205ENST00000415191 CDK19Q9BWU1 502 aa24.86■■□□□ 1.57
C2CD3-205ENST00000415191 STAG3Q9UJ98 1225 aa24.86■■□□□ 1.57
C2CD3-205ENST00000415191 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
C2CD3-205ENST00000415191 CABP1Q9NZU7 370 aa24.84■■□□□ 1.57
C2CD3-205ENST00000415191 DIAPH1O60610 1272 aaKnown RBP24.83■■□□□ 1.57
C2CD3-205ENST00000415191 RIPK4P57078 832 aa24.82■■□□□ 1.56
C2CD3-205ENST00000415191 SSH1Q8WYL5 1049 aa24.82■■□□□ 1.56
C2CD3-205ENST00000415191 ARHGEF40Q8TER5 1519 aa24.81■■□□□ 1.56
C2CD3-205ENST00000415191 TRIM27P14373 513 aa24.8■■□□□ 1.56
C2CD3-205ENST00000415191 KIF20BQ96Q89 1820 aa24.8■■□□□ 1.56
C2CD3-205ENST00000415191 IL16Q14005 1332 aa24.79■■□□□ 1.56
C2CD3-205ENST00000415191 ZMYM3Q14202 1370 aa24.79■■□□□ 1.56
C2CD3-205ENST00000415191 PNPLA6Q8IY17 1366 aa24.78■■□□□ 1.56
C2CD3-205ENST00000415191 ITPRIPQ8IWB1 547 aa24.77■■□□□ 1.56
C2CD3-205ENST00000415191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.77■■□□□ 1.56
C2CD3-205ENST00000415191 ATF7IPQ6VMQ6 1270 aa24.76■■□□□ 1.55
C2CD3-205ENST00000415191 PNNQ9H307 717 aaKnown RBP24.76■■□□□ 1.55
C2CD3-205ENST00000415191 GSE1Q14687 1217 aa24.76■■□□□ 1.55
C2CD3-205ENST00000415191 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
C2CD3-205ENST00000415191 WAPLQ7Z5K2 1190 aa24.75■■□□□ 1.55
C2CD3-205ENST00000415191 UPF2Q9HAU5 1272 aaKnown RBP24.75■■□□□ 1.55
C2CD3-205ENST00000415191 NOB1Q9ULX3 412 aaKnown RBP24.75■■□□□ 1.55
C2CD3-205ENST00000415191 FRAT2O75474 233 aaPredicted RBP24.75■■□□□ 1.55
C2CD3-205ENST00000415191 DDX19BQ9UMR2 479 aa24.75■■□□□ 1.55
C2CD3-205ENST00000415191 BECN1Q14457 450 aa24.74■■□□□ 1.55
C2CD3-205ENST00000415191 FBLN1P23142 703 aa24.74■■□□□ 1.55
C2CD3-205ENST00000415191 FCHSD2O94868 740 aa24.72■■□□□ 1.55
C2CD3-205ENST00000415191 FAM69CQ0P6D2 419 aa24.72■■□□□ 1.55
C2CD3-205ENST00000415191 LRRC7Q96NW7 1537 aa24.71■■□□□ 1.55
C2CD3-205ENST00000415191 PRKAR2BP31323 418 aa24.7■■□□□ 1.55
C2CD3-205ENST00000415191 HDAC1Q13547 482 aaPredicted RBP24.7■■□□□ 1.55
C2CD3-205ENST00000415191 TBC1D32Q96NH3 1257 aa24.7■■□□□ 1.55
C2CD3-205ENST00000415191 POLKQ9UBT6 870 aa24.7■■□□□ 1.55
C2CD3-205ENST00000415191 TMEM57Q8N5G2 664 aa24.7■■□□□ 1.54
C2CD3-205ENST00000415191 A2ML1A8K2U0 1454 aa24.7■■□□□ 1.54
C2CD3-205ENST00000415191 TSPOAP1O95153 1857 aa24.69■■□□□ 1.54
C2CD3-205ENST00000415191 RSPH6AQ9H0K4 717 aa24.69■■□□□ 1.54
C2CD3-205ENST00000415191 CDC42BPGQ6DT37 1551 aa24.69■■□□□ 1.54
C2CD3-205ENST00000415191 KIF16BQ96L93 1317 aa24.69■■□□□ 1.54
C2CD3-205ENST00000415191 DLC1Q96QB1 1528 aa24.69■■□□□ 1.54
C2CD3-205ENST00000415191 MAP2P11137 1827 aaKnown RBP24.69■■□□□ 1.54
C2CD3-205ENST00000415191 ATP7BP35670 1465 aa24.68■■□□□ 1.54
C2CD3-205ENST00000415191 RIMS2Q9UQ26 1411 aa24.68■■□□□ 1.54
C2CD3-205ENST00000415191 IPO8O15397 1037 aaKnown RBP24.67■■□□□ 1.54
C2CD3-205ENST00000415191 FAM135BQ49AJ0 1406 aa24.66■■□□□ 1.54
C2CD3-205ENST00000415191 SLKQ9H2G2 1235 aaPredicted RBP24.65■■□□□ 1.54
C2CD3-205ENST00000415191 SETD1AO15047 1707 aaKnown RBP24.65■■□□□ 1.54
C2CD3-205ENST00000415191 IL27Q8NEV9 243 aa24.65■■□□□ 1.54
C2CD3-205ENST00000415191 PPP6R1Q9UPN7 881 aa24.65■■□□□ 1.54
C2CD3-205ENST00000415191 HMOX1P09601 288 aa24.64■■□□□ 1.54
C2CD3-205ENST00000415191 ZBTB40Q9NUA8 1239 aa24.64■■□□□ 1.54
C2CD3-205ENST00000415191 MLECQ14165 292 aa24.64■■□□□ 1.53
C2CD3-205ENST00000415191 ALDH1L2Q3SY69 923 aa24.64■■□□□ 1.53
C2CD3-205ENST00000415191 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
C2CD3-205ENST00000415191 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
C2CD3-205ENST00000415191 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
C2CD3-205ENST00000415191 PHACTR3Q96KR7 559 aa24.63■■□□□ 1.53
C2CD3-205ENST00000415191 AGLP35573 1532 aa24.63■■□□□ 1.53
C2CD3-205ENST00000415191 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
C2CD3-205ENST00000415191 SMC5Q8IY18 1101 aa24.62■■□□□ 1.53
C2CD3-205ENST00000415191 REREQ9P2R6 1566 aa24.62■■□□□ 1.53
C2CD3-205ENST00000415191 DIP2BQ9P265 1576 aa24.62■■□□□ 1.53
C2CD3-205ENST00000415191 EMILIN1Q9Y6C2 1016 aa24.62■■□□□ 1.53
C2CD3-205ENST00000415191 NFE2L2Q16236 605 aa24.61■■□□□ 1.53
C2CD3-205ENST00000415191 THUMPD2Q9BTF0 503 aaKnown RBP24.61■■□□□ 1.53
C2CD3-205ENST00000415191 NME9Q86XW9 330 aa24.6■■□□□ 1.53
C2CD3-205ENST00000415191 TBC1D2Q9BYX2 928 aa24.6■■□□□ 1.53
C2CD3-205ENST00000415191 PPIP5K1Q6PFW1 1433 aa24.6■■□□□ 1.53
C2CD3-205ENST00000415191 WASLO00401 505 aaPredicted RBP24.59■■□□□ 1.53
C2CD3-205ENST00000415191 EDC4Q6P2E9 1401 aaKnown RBP24.58■■□□□ 1.53
C2CD3-205ENST00000415191 CPSF1Q10570 1443 aaKnown RBP24.58■■□□□ 1.53
C2CD3-205ENST00000415191 ZRANB1Q9UGI0 708 aa24.58■■□□□ 1.53
C2CD3-205ENST00000415191 MFAP1P55081 439 aaKnown RBP24.57■■□□□ 1.52
C2CD3-205ENST00000415191 ZNF428Q96B54 188 aa24.57■■□□□ 1.52
C2CD3-205ENST00000415191 IL13P35225 146 aa24.56■■□□□ 1.52
C2CD3-205ENST00000415191 ANTXR1Q9H6X2 564 aa24.56■■□□□ 1.52
C2CD3-205ENST00000415191 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
C2CD3-205ENST00000415191 METP08581 1390 aa24.56■■□□□ 1.52
C2CD3-205ENST00000415191 C22orf23Q9BZE7 217 aa24.55■■□□□ 1.52
C2CD3-205ENST00000415191 NRXN3Q9Y4C0 1643 aa24.55■■□□□ 1.52
C2CD3-205ENST00000415191 CALD1Q05682 793 aaKnown RBP24.55■■□□□ 1.52
C2CD3-205ENST00000415191 BRPF1P55201 1214 aaPredicted RBP24.54■■□□□ 1.52
C2CD3-205ENST00000415191 VAMP4O75379 141 aa24.54■■□□□ 1.52
C2CD3-205ENST00000415191 TSPYL6Q8N831 410 aa24.53■■□□□ 1.52
C2CD3-205ENST00000415191 CDK12Q9NYV4 1490 aaPredicted RBP24.53■■□□□ 1.52
C2CD3-205ENST00000415191 NCKAP5LQ9HCH0 1330 aa24.53■■□□□ 1.52
C2CD3-205ENST00000415191 NUDT16Q96DE0 195 aaKnown RBP24.53■■□□□ 1.52
C2CD3-205ENST00000415191 GNAI1P63096 354 aa24.52■■□□□ 1.52
C2CD3-205ENST00000415191 NUCB1Q02818 461 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 648.6 ms