RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
LINC00398-201ENST00000414407 AKAP12Q02952 1782 aa22.92■■□□□ 1.26
LINC00398-201ENST00000414407 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
LINC00398-201ENST00000414407 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.26
LINC00398-201ENST00000414407 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.26
LINC00398-201ENST00000414407 MED1Q15648 1581 aaPredicted RBP22.89■■□□□ 1.25
LINC00398-201ENST00000414407 A0A1W2PP64 1363 aa22.89■■□□□ 1.25
LINC00398-201ENST00000414407 TTC21BQ7Z4L5 1316 aa22.87■■□□□ 1.25
LINC00398-201ENST00000414407 LRP6O75581 1613 aa22.87■■□□□ 1.25
LINC00398-201ENST00000414407 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
LINC00398-201ENST00000414407 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
LINC00398-201ENST00000414407 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
LINC00398-201ENST00000414407 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
LINC00398-201ENST00000414407 ABTB2Q8N961 1025 aa22.87■■□□□ 1.25
LINC00398-201ENST00000414407 MON2Q7Z3U7 1717 aa22.87■■□□□ 1.25
LINC00398-201ENST00000414407 EDC4Q6P2E9 1401 aaKnown RBP22.86■■□□□ 1.25
LINC00398-201ENST00000414407 NRKQ7Z2Y5 1582 aa22.85■■□□□ 1.25
LINC00398-201ENST00000414407 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
LINC00398-201ENST00000414407 MYOM1P52179 1685 aa22.84■■□□□ 1.25
LINC00398-201ENST00000414407 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
LINC00398-201ENST00000414407 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
LINC00398-201ENST00000414407 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
LINC00398-201ENST00000414407 CABLES1Q8TDN4 633 aa22.81■■□□□ 1.24
LINC00398-201ENST00000414407 USP19O94966 1318 aa22.81■■□□□ 1.24
LINC00398-201ENST00000414407 HAP1P54257 671 aaPredicted RBP22.8■■□□□ 1.24
LINC00398-201ENST00000414407 NLRP6P59044 892 aa22.8■■□□□ 1.24
LINC00398-201ENST00000414407 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
LINC00398-201ENST00000414407 ADAMTS2O95450 1211 aa22.79■■□□□ 1.24
LINC00398-201ENST00000414407 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
LINC00398-201ENST00000414407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.79■■□□□ 1.24
LINC00398-201ENST00000414407 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
LINC00398-201ENST00000414407 ABCA3Q99758 1704 aa22.78■■□□□ 1.24
LINC00398-201ENST00000414407 CRYBG1Q9Y4K1 1723 aa22.78■■□□□ 1.24
LINC00398-201ENST00000414407 CCDC7Q96M83 1385 aa22.77■■□□□ 1.24
LINC00398-201ENST00000414407 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
LINC00398-201ENST00000414407 CARD14Q9BXL6 1004 aa22.76■■□□□ 1.23
LINC00398-201ENST00000414407 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
LINC00398-201ENST00000414407 NME9Q86XW9 330 aa22.75■■□□□ 1.23
LINC00398-201ENST00000414407 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
LINC00398-201ENST00000414407 GCP02774 474 aa22.74■■□□□ 1.23
LINC00398-201ENST00000414407 C8orf37Q96NL8 207 aa22.74■■□□□ 1.23
LINC00398-201ENST00000414407 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
LINC00398-201ENST00000414407 SLIT3O75094 1523 aa22.73■■□□□ 1.23
LINC00398-201ENST00000414407 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
LINC00398-201ENST00000414407 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
LINC00398-201ENST00000414407 KCNH5Q8NCM2 988 aa22.73■■□□□ 1.23
LINC00398-201ENST00000414407 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
LINC00398-201ENST00000414407 PANK3Q9H999 370 aa22.73■■□□□ 1.23
LINC00398-201ENST00000414407 USP54Q70EL1 1684 aa22.73■■□□□ 1.23
LINC00398-201ENST00000414407 NSD3Q9BZ95 1437 aa22.72■■□□□ 1.23
LINC00398-201ENST00000414407 ZNF772Q68DY9 489 aaPredicted RBP22.71■■□□□ 1.23
LINC00398-201ENST00000414407 CPDO75976 1380 aa22.71■■□□□ 1.23
LINC00398-201ENST00000414407 FYB1O15117 783 aa22.7■■□□□ 1.22
LINC00398-201ENST00000414407 RGS17Q9UGC6 210 aaPredicted RBP22.7■■□□□ 1.22
LINC00398-201ENST00000414407 AFF2P51816 1311 aa22.7■■□□□ 1.22
LINC00398-201ENST00000414407 OVOS2A0A0J9YW53 1432 aa22.7■■□□□ 1.22
LINC00398-201ENST00000414407 OVOS2Q6IE36 1432 aa22.7■■□□□ 1.22
LINC00398-201ENST00000414407 CGNL1Q0VF96 1302 aa22.69■■□□□ 1.22
LINC00398-201ENST00000414407 FAM83GA6ND36 823 aa22.69■■□□□ 1.22
LINC00398-201ENST00000414407 COG3Q96JB2 828 aa22.69■■□□□ 1.22
LINC00398-201ENST00000414407 ZRANB1Q9UGI0 708 aa22.69■■□□□ 1.22
LINC00398-201ENST00000414407 KIAA0232Q92628 1395 aa22.68■■□□□ 1.22
LINC00398-201ENST00000414407 SLIT2O94813 1529 aa22.67■■□□□ 1.22
LINC00398-201ENST00000414407 ZC3H6P61129 1189 aaKnown RBP22.67■■□□□ 1.22
LINC00398-201ENST00000414407 PRDM11Q9NQV5 511 aa22.67■■□□□ 1.22
LINC00398-201ENST00000414407 COL14A1Q05707 1796 aaKnown RBP22.66■■□□□ 1.22
LINC00398-201ENST00000414407 USP21Q9UK80 565 aa22.65■■□□□ 1.22
LINC00398-201ENST00000414407 BCL9LQ86UU0 1499 aa22.65■■□□□ 1.22
LINC00398-201ENST00000414407 NFAT5O94916 1531 aa22.64■■□□□ 1.21
LINC00398-201ENST00000414407 GGNBP2Q9H3C7 697 aa22.64■■□□□ 1.21
LINC00398-201ENST00000414407 ARHGEF25Q86VW2 580 aa22.63■■□□□ 1.21
LINC00398-201ENST00000414407 KNSTRNQ9Y448 316 aa22.63■■□□□ 1.21
LINC00398-201ENST00000414407 NSD2O96028 1365 aa22.63■■□□□ 1.21
LINC00398-201ENST00000414407 NWD2Q9ULI1 1742 aa22.62■■□□□ 1.21
LINC00398-201ENST00000414407 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
LINC00398-201ENST00000414407 UNC5CLQ8IV45 518 aa22.62■■□□□ 1.21
LINC00398-201ENST00000414407 AATKQ6ZMQ8 1374 aa22.62■■□□□ 1.21
LINC00398-201ENST00000414407 PER1O15534 1290 aaPredicted RBP22.61■■□□□ 1.21
LINC00398-201ENST00000414407 TRPC5Q9UL62 973 aaPredicted RBP22.61■■□□□ 1.21
LINC00398-201ENST00000414407 CHRNA2Q15822 529 aa22.6■■□□□ 1.21
LINC00398-201ENST00000414407 BTG4Q9NY30 223 aa22.6■■□□□ 1.21
LINC00398-201ENST00000414407 PLCH1Q4KWH8 1693 aa22.6■■□□□ 1.21
LINC00398-201ENST00000414407 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.6■■□□□ 1.21
LINC00398-201ENST00000414407 SOX12O15370 315 aa22.59■■□□□ 1.21
LINC00398-201ENST00000414407 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
LINC00398-201ENST00000414407 QTRT2Q9H974 415 aaKnown RBP22.59■■□□□ 1.21
LINC00398-201ENST00000414407 ABCC6O95255 1503 aa22.58■■□□□ 1.21
LINC00398-201ENST00000414407 ATRNO75882 1429 aa22.57■■□□□ 1.2
LINC00398-201ENST00000414407 AMER1Q5JTC6 1135 aaPredicted RBP22.57■■□□□ 1.2
LINC00398-201ENST00000414407 LMO7Q8WWI1 1683 aa22.57■■□□□ 1.2
LINC00398-201ENST00000414407 VPS72Q15906 364 aa22.56■■□□□ 1.2
LINC00398-201ENST00000414407 NPC1L1Q9UHC9 1359 aa22.55■■□□□ 1.2
LINC00398-201ENST00000414407 CAMTA1Q9Y6Y1 1673 aa22.55■■□□□ 1.2
LINC00398-201ENST00000414407 COL18A1P39060 1754 aa22.54■■□□□ 1.2
LINC00398-201ENST00000414407 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
LINC00398-201ENST00000414407 NRAPQ86VF7 1730 aa22.54■■□□□ 1.2
LINC00398-201ENST00000414407 ZBTB7CA1YPR0 619 aa22.53■■□□□ 1.2
LINC00398-201ENST00000414407 RXRBP28702 533 aa22.53■■□□□ 1.2
LINC00398-201ENST00000414407 ANKRD26Q9UPS8 1709 aa22.53■■□□□ 1.2
LINC00398-201ENST00000414407 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms