RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ITPRIPQ8IWB1 547 aa22.21■■□□□ 1.15
SDCBP-202ENST00000413219 TRIM35Q9UPQ4 493 aa22.21■■□□□ 1.15
SDCBP-202ENST00000413219 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
SDCBP-202ENST00000413219 SNX21Q969T3 373 aa22.21■■□□□ 1.15
SDCBP-202ENST00000413219 RBM25P49756 843 aaKnown RBP22.2■■□□□ 1.14
SDCBP-202ENST00000413219 UBE2Q2Q8WVN8 375 aa22.2■■□□□ 1.14
SDCBP-202ENST00000413219 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.14
SDCBP-202ENST00000413219 ZBTB40Q9NUA8 1239 aa22.2■■□□□ 1.14
SDCBP-202ENST00000413219 MED14O60244 1454 aa22.2■■□□□ 1.14
SDCBP-202ENST00000413219 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
SDCBP-202ENST00000413219 DDIT3P35638 169 aa22.19■■□□□ 1.14
SDCBP-202ENST00000413219 MRE11P49959 708 aa22.19■■□□□ 1.14
SDCBP-202ENST00000413219 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
SDCBP-202ENST00000413219 PIK3C2BO00750 1634 aa22.18■■□□□ 1.14
SDCBP-202ENST00000413219 NOB1Q9ULX3 412 aaKnown RBP22.18■■□□□ 1.14
SDCBP-202ENST00000413219 FRMPD1Q5SYB0 1578 aa22.17■■□□□ 1.14
SDCBP-202ENST00000413219 VGFO15240 615 aaPredicted RBP22.17■■□□□ 1.14
SDCBP-202ENST00000413219 NUCB1Q02818 461 aa22.17■■□□□ 1.14
SDCBP-202ENST00000413219 CIZ1Q9ULV3 898 aaPredicted RBP22.17■■□□□ 1.14
SDCBP-202ENST00000413219 ALDH1L2Q3SY69 923 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 CAMSAP1Q5T5Y3 1602 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 ABCC3O15438 1527 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 MLH3Q9UHC1 1453 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
SDCBP-202ENST00000413219 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
SDCBP-202ENST00000413219 A0A1W2PP64 1363 aa22.15■■□□□ 1.14
SDCBP-202ENST00000413219 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
SDCBP-202ENST00000413219 CLCN1P35523 988 aa22.15■■□□□ 1.14
SDCBP-202ENST00000413219 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
SDCBP-202ENST00000413219 BRPF1P55201 1214 aaPredicted RBP22.13■■□□□ 1.13
SDCBP-202ENST00000413219 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
SDCBP-202ENST00000413219 CFAP74Q9C0B2 1584 aa22.13■■□□□ 1.13
SDCBP-202ENST00000413219 GZF1Q9H116 711 aaPredicted RBP22.13■■□□□ 1.13
SDCBP-202ENST00000413219 CABP2Q9NPB3 220 aa22.13■■□□□ 1.13
SDCBP-202ENST00000413219 ZFYVE9O95405 1425 aa22.12■■□□□ 1.13
SDCBP-202ENST00000413219 POGZQ7Z3K3 1410 aa22.12■■□□□ 1.13
SDCBP-202ENST00000413219 PTMSP20962 102 aa22.11■■□□□ 1.13
SDCBP-202ENST00000413219 ATAD2Q6PL18 1390 aa22.11■■□□□ 1.13
SDCBP-202ENST00000413219 PANK2Q9BZ23 570 aa22.11■■□□□ 1.13
SDCBP-202ENST00000413219 RIPK4P57078 832 aa22.1■■□□□ 1.13
SDCBP-202ENST00000413219 BMP2KLQ5H9B9 411 aa22.1■■□□□ 1.13
SDCBP-202ENST00000413219 CHMP4BQ9H444 224 aaKnown RBP22.1■■□□□ 1.13
SDCBP-202ENST00000413219 PNPLA6Q8IY17 1366 aa22.1■■□□□ 1.13
SDCBP-202ENST00000413219 CHD1LQ86WJ1 897 aa22.1■■□□□ 1.13
SDCBP-202ENST00000413219 CDC42BPGQ6DT37 1551 aa22.1■■□□□ 1.13
SDCBP-202ENST00000413219 PPIP5K1Q6PFW1 1433 aa22.09■■□□□ 1.13
SDCBP-202ENST00000413219 GRPEL1Q9HAV7 217 aa22.09■■□□□ 1.13
SDCBP-202ENST00000413219 TERF2IPQ9NYB0 399 aa22.08■■□□□ 1.13
SDCBP-202ENST00000413219 GGT6Q6P531 493 aa22.08■■□□□ 1.12
SDCBP-202ENST00000413219 GBP4Q96PP9 640 aa22.08■■□□□ 1.12
SDCBP-202ENST00000413219 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.12
SDCBP-202ENST00000413219 CLTCQ00610 1675 aaKnown RBP22.07■■□□□ 1.12
SDCBP-202ENST00000413219 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
SDCBP-202ENST00000413219 SKOR2Q2VWA4 1001 aaPredicted RBP22.07■■□□□ 1.12
SDCBP-202ENST00000413219 CFAP65Q6ZU64 1925 aaKnown RBP22.07■■□□□ 1.12
SDCBP-202ENST00000413219 REREQ9P2R6 1566 aa22.07■■□□□ 1.12
SDCBP-202ENST00000413219 GCC1Q96CN9 775 aa22.07■■□□□ 1.12
SDCBP-202ENST00000413219 SIGLEC1Q9BZZ2 1709 aa22.06■■□□□ 1.12
SDCBP-202ENST00000413219 FYB1O15117 783 aa22.06■■□□□ 1.12
SDCBP-202ENST00000413219 ARXQ96QS3 562 aa22.06■■□□□ 1.12
SDCBP-202ENST00000413219 RAB3GAP1Q15042 981 aa22.05■■□□□ 1.12
SDCBP-202ENST00000413219 LNPKQ9C0E8 428 aa22.05■■□□□ 1.12
SDCBP-202ENST00000413219 PIK3R4Q99570 1358 aa22.05■■□□□ 1.12
SDCBP-202ENST00000413219 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
SDCBP-202ENST00000413219 TNPO1Q92973 898 aaKnown RBP22.05■■□□□ 1.12
SDCBP-202ENST00000413219 CD163L1Q9NR16 1453 aa22.04■■□□□ 1.12
SDCBP-202ENST00000413219 FCHSD2O94868 740 aa22.04■■□□□ 1.12
SDCBP-202ENST00000413219 SRPK2P78362 688 aaKnown RBP22.04■■□□□ 1.12
SDCBP-202ENST00000413219 ARHGAP31Q2M1Z3 1444 aa22.04■■□□□ 1.12
SDCBP-202ENST00000413219 ARHGAP45Q92619 1136 aa22.04■■□□□ 1.12
SDCBP-202ENST00000413219 PTPRMP28827 1452 aa22.03■■□□□ 1.12
SDCBP-202ENST00000413219 PTCH1Q13635 1447 aa22.02■■□□□ 1.12
SDCBP-202ENST00000413219 KIF2CQ99661 725 aa22.02■■□□□ 1.11
SDCBP-202ENST00000413219 ZBTB7BO15156 539 aaPredicted RBP22■■□□□ 1.11
SDCBP-202ENST00000413219 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
SDCBP-202ENST00000413219 FAM135BQ49AJ0 1406 aa22■■□□□ 1.11
SDCBP-202ENST00000413219 CALD1Q05682 793 aaKnown RBP21.99■■□□□ 1.11
SDCBP-202ENST00000413219 HDGFL2Q7Z4V5 671 aaPredicted RBP21.99■■□□□ 1.11
SDCBP-202ENST00000413219 K7ELQ4 463 aaPredicted RBP21.98■■□□□ 1.11
SDCBP-202ENST00000413219 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
SDCBP-202ENST00000413219 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
SDCBP-202ENST00000413219 KIF20BQ96Q89 1820 aa21.97■■□□□ 1.11
SDCBP-202ENST00000413219 ANKRD45Q5TZF3 282 aa21.97■■□□□ 1.11
SDCBP-202ENST00000413219 CLEC17AQ6ZS10 378 aa21.97■■□□□ 1.11
SDCBP-202ENST00000413219 ESPNB1AK53 854 aa21.97■■□□□ 1.11
SDCBP-202ENST00000413219 MRPL50Q8N5N7 158 aaKnown RBP21.97■■□□□ 1.11
SDCBP-202ENST00000413219 NAP1L5Q96NT1 182 aaPredicted RBP21.97■■□□□ 1.11
SDCBP-202ENST00000413219 SLC52A1Q9NWF4 448 aa21.97■■□□□ 1.11
SDCBP-202ENST00000413219 TBC1D9Q6ZT07 1266 aa21.95■■□□□ 1.11
SDCBP-202ENST00000413219 CFAP44Q96MT7 982 aa21.95■■□□□ 1.11
SDCBP-202ENST00000413219 VAMP4O75379 141 aa21.94■■□□□ 1.1
SDCBP-202ENST00000413219 ABCC4O15439 1325 aa21.94■■□□□ 1.1
SDCBP-202ENST00000413219 HSP90AA1P07900 732 aaKnown RBP21.94■■□□□ 1.1
SDCBP-202ENST00000413219 IDI1Q13907 227 aa21.94■■□□□ 1.1
SDCBP-202ENST00000413219 NFE2L2Q16236 605 aa21.94■■□□□ 1.1
SDCBP-202ENST00000413219 YTHDC2Q9H6S0 1430 aaKnown RBP21.94■■□□□ 1.1
SDCBP-202ENST00000413219 STK26Q9P289 416 aa21.94■■□□□ 1.1
SDCBP-202ENST00000413219 IBTKQ9P2D0 1353 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms