RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 CLCN1P35523 988 aa6.28□□□□□ -1.4
SEMA3C-202ENST00000411788 IL27Q8NEV9 243 aa6.28□□□□□ -1.4
SEMA3C-202ENST00000411788 GOPCQ9HD26 462 aa6.28□□□□□ -1.4
SEMA3C-202ENST00000411788 WASF2Q9Y6W5 498 aa6.28□□□□□ -1.4
SEMA3C-202ENST00000411788 CAPN5O15484 640 aaPredicted RBP6.27□□□□□ -1.41
SEMA3C-202ENST00000411788 ZNF326Q5BKZ1 582 aaKnown RBP6.27□□□□□ -1.41
SEMA3C-202ENST00000411788 PARP9Q8IXQ6 854 aa6.27□□□□□ -1.41
SEMA3C-202ENST00000411788 H3BM21 787 aa6.26□□□□□ -1.41
SEMA3C-202ENST00000411788 BMP1P13497 986 aa6.26□□□□□ -1.41
SEMA3C-202ENST00000411788 JUNDP17535 347 aa6.26□□□□□ -1.41
SEMA3C-202ENST00000411788 NEUROD1Q13562 356 aa6.26□□□□□ -1.41
SEMA3C-202ENST00000411788 TRIM46Q7Z4K8 759 aa6.26□□□□□ -1.41
SEMA3C-202ENST00000411788 EHBP1Q8NDI1 1231 aa6.26□□□□□ -1.41
SEMA3C-202ENST00000411788 SIAH2O43255 324 aa6.25□□□□□ -1.41
SEMA3C-202ENST00000411788 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
SEMA3C-202ENST00000411788 BRD2P25440 801 aaKnown RBP6.24□□□□□ -1.41
SEMA3C-202ENST00000411788 FLIIQ13045 1269 aa6.24□□□□□ -1.41
SEMA3C-202ENST00000411788 NUDT12Q9BQG2 462 aa6.24□□□□□ -1.41
SEMA3C-202ENST00000411788 CDK11AQ9UQ88 783 aaPredicted RBP6.24□□□□□ -1.41
SEMA3C-202ENST00000411788 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 HOXA2O43364 376 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 VEGFBP49765 207 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 FGD1P98174 961 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 GIGYF2Q6Y7W6 1299 aaKnown RBP6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 FAM117AQ9C073 453 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 RSPH6AQ9H0K4 717 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 GPCPD1Q9NPB8 672 aa6.23□□□□□ -1.41
SEMA3C-202ENST00000411788 HLA-CQ95604 372 aa6.22□□□□□ -1.41
SEMA3C-202ENST00000411788 PCMTD1Q96MG8 357 aaPredicted RBP6.22□□□□□ -1.41
SEMA3C-202ENST00000411788 DIXDC1Q155Q3 683 aa6.21□□□□□ -1.42
SEMA3C-202ENST00000411788 RETREG3Q86VR2 466 aa6.21□□□□□ -1.42
SEMA3C-202ENST00000411788 ZFP42Q96MM3 310 aa6.21□□□□□ -1.42
SEMA3C-202ENST00000411788 ERBB4Q15303 1308 aa6.21□□□□□ -1.42
SEMA3C-202ENST00000411788 PLEKHG3A1L390 1219 aa6.2□□□□□ -1.42
SEMA3C-202ENST00000411788 PTCRAQ6ISU1 281 aaPredicted RBP6.2□□□□□ -1.42
SEMA3C-202ENST00000411788 SH3BP2P78314 561 aa6.19□□□□□ -1.42
SEMA3C-202ENST00000411788 MDM2Q00987 491 aaPredicted RBP6.19□□□□□ -1.42
SEMA3C-202ENST00000411788 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
SEMA3C-202ENST00000411788 SCARF1Q14162 830 aa6.19□□□□□ -1.42
SEMA3C-202ENST00000411788 SH3D19Q5HYK7 790 aa6.19□□□□□ -1.42
SEMA3C-202ENST00000411788 SYMPKQ92797 1274 aaKnown RBP6.19□□□□□ -1.42
SEMA3C-202ENST00000411788 CCNYL3P0C7X3 344 aa6.18□□□□□ -1.42
SEMA3C-202ENST00000411788 MRPL14Q6P1L8 145 aaKnown RBP6.18□□□□□ -1.42
SEMA3C-202ENST00000411788 NUTM1Q86Y26 1132 aa6.18□□□□□ -1.42
SEMA3C-202ENST00000411788 MS4A1P11836 297 aa6.17□□□□□ -1.42
SEMA3C-202ENST00000411788 MPNDQ8N594 471 aa6.17□□□□□ -1.42
SEMA3C-202ENST00000411788 ZMYND15Q9H091 742 aa6.17□□□□□ -1.42
SEMA3C-202ENST00000411788 CCDC180Q9P1Z9 1646 aa6.17□□□□□ -1.42
SEMA3C-202ENST00000411788 C6orf229H3BNL8 230 aa6.16□□□□□ -1.42
SEMA3C-202ENST00000411788 VSIG8P0DPA2 414 aa6.16□□□□□ -1.42
SEMA3C-202ENST00000411788 VARSP26640 1264 aaKnown RBP6.16□□□□□ -1.42
SEMA3C-202ENST00000411788 NNTQ13423 1086 aa6.16□□□□□ -1.42
SEMA3C-202ENST00000411788 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
SEMA3C-202ENST00000411788 UNC93B1Q9H1C4 597 aa6.16□□□□□ -1.42
SEMA3C-202ENST00000411788 FDX1P10109 184 aa6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 SSTR3P32745 418 aaPredicted RBP6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 KCNMA1Q12791 1236 aa6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 PTPRNQ16849 979 aa6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 PURBQ96QR8 312 aaKnown RBP6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 EVA1BQ9NVM1 165 aa6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 TLL2Q9Y6L7 1015 aa6.15□□□□□ -1.42
SEMA3C-202ENST00000411788 ADH1CP00326 375 aa6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 HSP90B1P14625 803 aaKnown RBP6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 AAMPQ13685 434 aa6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 SKIV2LQ15477 1246 aaKnown RBP6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 LINC01559Q495D7 138 aa6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 BAP1Q92560 729 aa6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 FAM217BQ9NTX9 383 aaPredicted RBP6.14□□□□□ -1.43
SEMA3C-202ENST00000411788 HMGB1P09429 215 aaKnown RBP6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 TIMP2P16035 220 aa6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 WDR4P57081 412 aaKnown RBP6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 KCNH2Q12809 1159 aa6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 ZNF511Q8NB15 262 aa6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 BEGAINQ9BUH8 593 aa6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 CHMP4AQ9BY43 222 aa6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 ATP1B4Q9UN42 357 aaPredicted RBP6.13□□□□□ -1.43
SEMA3C-202ENST00000411788 PCGF6Q9BYE7 350 aa6.12□□□□□ -1.43
SEMA3C-202ENST00000411788 DCAF1Q9Y4B6 1507 aa6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 APBB1O00213 710 aa6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 MAN1A2O60476 641 aa6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 KCTD17Q8N5Z5 321 aa6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 FAM174AQ8TBP5 190 aa6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 BCCIPQ9P287 314 aaKnown RBP eCLIP6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 PCDHGC3Q9UN70 934 aa6.11□□□□□ -1.43
SEMA3C-202ENST00000411788 SOBPA7XYQ1 873 aa6.1□□□□□ -1.43
SEMA3C-202ENST00000411788 DESI1Q6ICB0 168 aa6.1□□□□□ -1.43
SEMA3C-202ENST00000411788 SPDYE5A6NIY4 337 aa6.09□□□□□ -1.43
SEMA3C-202ENST00000411788 RNF225M0QZC1 329 aaPredicted RBP6.09□□□□□ -1.43
SEMA3C-202ENST00000411788 UBTFP17480 764 aaKnown RBP6.09□□□□□ -1.43
SEMA3C-202ENST00000411788 CLK2P49760 499 aaKnown RBP6.09□□□□□ -1.43
SEMA3C-202ENST00000411788 TMEM151AQ8N4L1 468 aa6.09□□□□□ -1.43
SEMA3C-202ENST00000411788 KLF16Q9BXK1 252 aaPredicted RBP6.09□□□□□ -1.43
SEMA3C-202ENST00000411788 A6NJR5 290 aa6.08□□□□□ -1.44
SEMA3C-202ENST00000411788 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
SEMA3C-202ENST00000411788 RAD21O60216 631 aa6.08□□□□□ -1.44
SEMA3C-202ENST00000411788 PPFIA3O75145 1194 aa6.08□□□□□ -1.44
SEMA3C-202ENST00000411788 UPP2O95045 317 aa6.08□□□□□ -1.44
SEMA3C-202ENST00000411788 ZIC2O95409 532 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms