RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
NEDD1-202ENST00000411739 TMF1P82094 1093 aa16.78■□□□□ 0.28
NEDD1-202ENST00000411739 ABTB2Q8N961 1025 aa16.78■□□□□ 0.28
NEDD1-202ENST00000411739 AFF2P51816 1311 aa16.78■□□□□ 0.28
NEDD1-202ENST00000411739 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
NEDD1-202ENST00000411739 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
NEDD1-202ENST00000411739 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.28
NEDD1-202ENST00000411739 USP6P35125 1406 aa16.75■□□□□ 0.27
NEDD1-202ENST00000411739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
NEDD1-202ENST00000411739 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
NEDD1-202ENST00000411739 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
NEDD1-202ENST00000411739 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
NEDD1-202ENST00000411739 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
NEDD1-202ENST00000411739 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
NEDD1-202ENST00000411739 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
NEDD1-202ENST00000411739 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
NEDD1-202ENST00000411739 NLRP6P59044 892 aa16.72■□□□□ 0.27
NEDD1-202ENST00000411739 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
NEDD1-202ENST00000411739 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
NEDD1-202ENST00000411739 HDGFL2Q7Z4V5 671 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-202ENST00000411739 USP21Q9UK80 565 aa16.72■□□□□ 0.27
NEDD1-202ENST00000411739 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-202ENST00000411739 SOX12O15370 315 aa16.71■□□□□ 0.27
NEDD1-202ENST00000411739 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
NEDD1-202ENST00000411739 ZNF772Q68DY9 489 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-202ENST00000411739 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
NEDD1-202ENST00000411739 A0A1W2PP64 1363 aa16.71■□□□□ 0.27
NEDD1-202ENST00000411739 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
NEDD1-202ENST00000411739 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
NEDD1-202ENST00000411739 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
NEDD1-202ENST00000411739 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
NEDD1-202ENST00000411739 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
NEDD1-202ENST00000411739 NME9Q86XW9 330 aa16.7■□□□□ 0.26
NEDD1-202ENST00000411739 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
NEDD1-202ENST00000411739 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
NEDD1-202ENST00000411739 AKAP12Q02952 1782 aa16.69■□□□□ 0.26
NEDD1-202ENST00000411739 FNBP4Q8N3X1 1017 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-202ENST00000411739 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
NEDD1-202ENST00000411739 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
NEDD1-202ENST00000411739 GCP02774 474 aa16.67■□□□□ 0.26
NEDD1-202ENST00000411739 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
NEDD1-202ENST00000411739 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
NEDD1-202ENST00000411739 BCL9LQ86UU0 1499 aa16.66■□□□□ 0.26
NEDD1-202ENST00000411739 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
NEDD1-202ENST00000411739 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
NEDD1-202ENST00000411739 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
NEDD1-202ENST00000411739 BRD4O60885 1362 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-202ENST00000411739 USP19O94966 1318 aa16.65■□□□□ 0.26
NEDD1-202ENST00000411739 RXRBP28702 533 aa16.64■□□□□ 0.26
NEDD1-202ENST00000411739 MON2Q7Z3U7 1717 aa16.64■□□□□ 0.25
NEDD1-202ENST00000411739 TTC21AQ8NDW8 1320 aa16.64■□□□□ 0.25
NEDD1-202ENST00000411739 UNC5CLQ8IV45 518 aa16.64■□□□□ 0.25
NEDD1-202ENST00000411739 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
NEDD1-202ENST00000411739 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
NEDD1-202ENST00000411739 SLIT2O94813 1529 aa16.63■□□□□ 0.25
NEDD1-202ENST00000411739 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
NEDD1-202ENST00000411739 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
NEDD1-202ENST00000411739 NINLQ9Y2I6 1382 aa16.63■□□□□ 0.25
NEDD1-202ENST00000411739 EDC4Q6P2E9 1401 aaKnown RBP16.63■□□□□ 0.25
NEDD1-202ENST00000411739 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
NEDD1-202ENST00000411739 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
NEDD1-202ENST00000411739 FBLN1P23142 703 aa16.61■□□□□ 0.25
NEDD1-202ENST00000411739 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
NEDD1-202ENST00000411739 MYOM1P52179 1685 aa16.6■□□□□ 0.25
NEDD1-202ENST00000411739 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
NEDD1-202ENST00000411739 GGNBP2Q9H3C7 697 aa16.6■□□□□ 0.25
NEDD1-202ENST00000411739 PLCH1Q4KWH8 1693 aa16.6■□□□□ 0.25
NEDD1-202ENST00000411739 ATRNO75882 1429 aa16.59■□□□□ 0.25
NEDD1-202ENST00000411739 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
NEDD1-202ENST00000411739 GJD4Q96KN9 370 aaPredicted RBP16.58■□□□□ 0.25
NEDD1-202ENST00000411739 FYB1O15117 783 aa16.58■□□□□ 0.24
NEDD1-202ENST00000411739 PANK3Q9H999 370 aa16.58■□□□□ 0.24
NEDD1-202ENST00000411739 SLIT3O75094 1523 aa16.57■□□□□ 0.24
NEDD1-202ENST00000411739 COL14A1Q05707 1796 aaKnown RBP16.57■□□□□ 0.24
NEDD1-202ENST00000411739 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
NEDD1-202ENST00000411739 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
NEDD1-202ENST00000411739 EVA1CP58658 441 aa16.56■□□□□ 0.24
NEDD1-202ENST00000411739 USP35Q9P2H5 1018 aa16.56■□□□□ 0.24
NEDD1-202ENST00000411739 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
NEDD1-202ENST00000411739 VPS72Q15906 364 aa16.56■□□□□ 0.24
NEDD1-202ENST00000411739 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
NEDD1-202ENST00000411739 COG3Q96JB2 828 aa16.56■□□□□ 0.24
NEDD1-202ENST00000411739 CPDO75976 1380 aa16.55■□□□□ 0.24
NEDD1-202ENST00000411739 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
NEDD1-202ENST00000411739 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
NEDD1-202ENST00000411739 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
NEDD1-202ENST00000411739 RGS12O14924 1447 aa16.54■□□□□ 0.24
NEDD1-202ENST00000411739 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
NEDD1-202ENST00000411739 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
NEDD1-202ENST00000411739 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
NEDD1-202ENST00000411739 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
NEDD1-202ENST00000411739 SOCS7O14512 581 aa16.53■□□□□ 0.24
NEDD1-202ENST00000411739 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
NEDD1-202ENST00000411739 NRAPQ86VF7 1730 aa16.53■□□□□ 0.24
NEDD1-202ENST00000411739 GLI3P10071 1580 aa16.52■□□□□ 0.24
NEDD1-202ENST00000411739 NFAT5O94916 1531 aa16.52■□□□□ 0.24
NEDD1-202ENST00000411739 A0A0G2JS52 829 aa16.52■□□□□ 0.23
NEDD1-202ENST00000411739 MYT1Q01538 1121 aa16.52■□□□□ 0.23
NEDD1-202ENST00000411739 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.51■□□□□ 0.23
NEDD1-202ENST00000411739 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms