RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
RN7SKP3-201ENST00000411409 ACEP12821 1306 aa13.1□□□□□ -0.31
RN7SKP3-201ENST00000411409 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
RN7SKP3-201ENST00000411409 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
RN7SKP3-201ENST00000411409 FOXO3O43524 673 aa13.09□□□□□ -0.31
RN7SKP3-201ENST00000411409 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
RN7SKP3-201ENST00000411409 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
RN7SKP3-201ENST00000411409 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
RN7SKP3-201ENST00000411409 TTC21AQ8NDW8 1320 aa13.08□□□□□ -0.32
RN7SKP3-201ENST00000411409 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 PXDNQ92626 1479 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 KIF7Q2M1P5 1343 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
RN7SKP3-201ENST00000411409 USP6P35125 1406 aa13.06□□□□□ -0.32
RN7SKP3-201ENST00000411409 SLC12A5Q9H2X9 1139 aa13.06□□□□□ -0.32
RN7SKP3-201ENST00000411409 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP3-201ENST00000411409 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
RN7SKP3-201ENST00000411409 SSH2Q76I76 1423 aa13.05□□□□□ -0.32
RN7SKP3-201ENST00000411409 SPATA31A6Q5VVP1 1343 aa13.05□□□□□ -0.32
RN7SKP3-201ENST00000411409 SPATA31A3Q5VYP0 1347 aa13.05□□□□□ -0.32
RN7SKP3-201ENST00000411409 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
RN7SKP3-201ENST00000411409 COL16A1Q07092 1604 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP3-201ENST00000411409 FKBP8Q14318 412 aa13.04□□□□□ -0.32
RN7SKP3-201ENST00000411409 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
RN7SKP3-201ENST00000411409 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
RN7SKP3-201ENST00000411409 AKAP12Q02952 1782 aa13.03□□□□□ -0.32
RN7SKP3-201ENST00000411409 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP3-201ENST00000411409 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP3-201ENST00000411409 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
RN7SKP3-201ENST00000411409 A0A1W2PP64 1363 aa13.03□□□□□ -0.32
RN7SKP3-201ENST00000411409 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
RN7SKP3-201ENST00000411409 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
RN7SKP3-201ENST00000411409 NSD2O96028 1365 aa13.01□□□□□ -0.33
RN7SKP3-201ENST00000411409 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
RN7SKP3-201ENST00000411409 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
RN7SKP3-201ENST00000411409 TRPM3Q9HCF6 1732 aaPredicted RBP13□□□□□ -0.33
RN7SKP3-201ENST00000411409 SHPRHQ149N8 1683 aa13□□□□□ -0.33
RN7SKP3-201ENST00000411409 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
RN7SKP3-201ENST00000411409 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
RN7SKP3-201ENST00000411409 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
RN7SKP3-201ENST00000411409 MYOM1P52179 1685 aa12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 NPC1L1Q9UHC9 1359 aa12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 PANK3Q9H999 370 aa12.99□□□□□ -0.33
RN7SKP3-201ENST00000411409 PNPLA6Q8IY17 1366 aa12.98□□□□□ -0.33
RN7SKP3-201ENST00000411409 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP3-201ENST00000411409 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
RN7SKP3-201ENST00000411409 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
RN7SKP3-201ENST00000411409 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
RN7SKP3-201ENST00000411409 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
RN7SKP3-201ENST00000411409 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
RN7SKP3-201ENST00000411409 USP54Q70EL1 1684 aa12.96□□□□□ -0.33
RN7SKP3-201ENST00000411409 USP19O94966 1318 aa12.96□□□□□ -0.33
RN7SKP3-201ENST00000411409 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP3-201ENST00000411409 RXRBP28702 533 aa12.96□□□□□ -0.33
RN7SKP3-201ENST00000411409 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
RN7SKP3-201ENST00000411409 LRP6O75581 1613 aa12.95□□□□□ -0.34
RN7SKP3-201ENST00000411409 NLRP6P59044 892 aa12.95□□□□□ -0.34
RN7SKP3-201ENST00000411409 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
RN7SKP3-201ENST00000411409 COG3Q96JB2 828 aa12.95□□□□□ -0.34
RN7SKP3-201ENST00000411409 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
RN7SKP3-201ENST00000411409 FYB1O15117 783 aa12.94□□□□□ -0.34
RN7SKP3-201ENST00000411409 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
RN7SKP3-201ENST00000411409 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP3-201ENST00000411409 CPDO75976 1380 aa12.93□□□□□ -0.34
RN7SKP3-201ENST00000411409 KIF24Q5T7B8 1368 aa12.93□□□□□ -0.34
RN7SKP3-201ENST00000411409 AFF2P51816 1311 aa12.92□□□□□ -0.34
RN7SKP3-201ENST00000411409 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
RN7SKP3-201ENST00000411409 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
RN7SKP3-201ENST00000411409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
RN7SKP3-201ENST00000411409 SLIT3O75094 1523 aa12.92□□□□□ -0.34
RN7SKP3-201ENST00000411409 GCP02774 474 aa12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 C8orf37Q96NL8 207 aa12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 PIK3C2AO00443 1686 aa12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 ABCC6O95255 1503 aa12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
RN7SKP3-201ENST00000411409 NME9Q86XW9 330 aa12.9□□□□□ -0.34
RN7SKP3-201ENST00000411409 NGLY1Q96IV0 654 aa12.88□□□□□ -0.35
RN7SKP3-201ENST00000411409 QTRT2Q9H974 415 aaKnown RBP12.88□□□□□ -0.35
RN7SKP3-201ENST00000411409 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
RN7SKP3-201ENST00000411409 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
RN7SKP3-201ENST00000411409 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
RN7SKP3-201ENST00000411409 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 ANKRD26Q9UPS8 1709 aa12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 ADAMTS2O95450 1211 aa12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
RN7SKP3-201ENST00000411409 RALBP1Q15311 655 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms