RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 MAP10Q9P2G4 905 aa8□□□□□ -1.13
RNU4-55P-201ENST00000410731 FAM187AA6NFU0 413 aa7.99□□□□□ -1.13
RNU4-55P-201ENST00000410731 LCE2BO14633 110 aa7.99□□□□□ -1.13
RNU4-55P-201ENST00000410731 PKDCCQ504Y2 493 aa7.99□□□□□ -1.13
RNU4-55P-201ENST00000410731 MRGPRX2Q96LB1 330 aa7.99□□□□□ -1.13
RNU4-55P-201ENST00000410731 PCMTD1Q96MG8 357 aaPredicted RBP7.99□□□□□ -1.13
RNU4-55P-201ENST00000410731 ATP1B4Q9UN42 357 aaPredicted RBP7.99□□□□□ -1.13
RNU4-55P-201ENST00000410731 SH3BP2P78314 561 aa7.98□□□□□ -1.13
RNU4-55P-201ENST00000410731 TRAF7Q6Q0C0 670 aa7.98□□□□□ -1.13
RNU4-55P-201ENST00000410731 ZNF511Q8NB15 262 aa7.98□□□□□ -1.13
RNU4-55P-201ENST00000410731 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
RNU4-55P-201ENST00000410731 SNIP1Q8TAD8 396 aaKnown RBP7.97□□□□□ -1.13
RNU4-55P-201ENST00000410731 BAP1Q92560 729 aa7.97□□□□□ -1.13
RNU4-55P-201ENST00000410731 TTC24A2A3L6 582 aaPredicted RBP7.96□□□□□ -1.14
RNU4-55P-201ENST00000410731 CTDSPL2Q05D32 466 aa7.96□□□□□ -1.14
RNU4-55P-201ENST00000410731 RFC5P40937 340 aa7.95□□□□□ -1.14
RNU4-55P-201ENST00000410731 EHBP1Q8NDI1 1231 aa7.95□□□□□ -1.14
RNU4-55P-201ENST00000410731 MYT1Q01538 1121 aa7.94□□□□□ -1.14
RNU4-55P-201ENST00000410731 ARMC2Q8NEN0 867 aa7.94□□□□□ -1.14
RNU4-55P-201ENST00000410731 SIAH2O43255 324 aa7.93□□□□□ -1.14
RNU4-55P-201ENST00000410731 AP1G2O75843 785 aa7.93□□□□□ -1.14
RNU4-55P-201ENST00000410731 AVPP01185 164 aa7.93□□□□□ -1.14
RNU4-55P-201ENST00000410731 SMPD1P17405 629 aa7.93□□□□□ -1.14
RNU4-55P-201ENST00000410731 NBPF14Q5TI25 921 aa7.93□□□□□ -1.14
RNU4-55P-201ENST00000410731 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
RNU4-55P-201ENST00000410731 USP17L8P0C7I0 530 aa7.92□□□□□ -1.14
RNU4-55P-201ENST00000410731 VARSP26640 1264 aaKnown RBP7.92□□□□□ -1.14
RNU4-55P-201ENST00000410731 J3QL48 77 aa7.91□□□□□ -1.14
RNU4-55P-201ENST00000410731 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
RNU4-55P-201ENST00000410731 GPKOWQ92917 476 aaPredicted RBP eCLIP7.91□□□□□ -1.14
RNU4-55P-201ENST00000410731 ALDH1A1P00352 501 aa7.9□□□□□ -1.14
RNU4-55P-201ENST00000410731 TMEM259Q4ZIN3 620 aa7.9□□□□□ -1.14
RNU4-55P-201ENST00000410731 MPNDQ8N594 471 aa7.9□□□□□ -1.14
RNU4-55P-201ENST00000410731 FOXJ1Q92949 421 aa7.9□□□□□ -1.14
RNU4-55P-201ENST00000410731 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
RNU4-55P-201ENST00000410731 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
RNU4-55P-201ENST00000410731 BPHLQ86WA6 291 aaPredicted RBP7.89□□□□□ -1.15
RNU4-55P-201ENST00000410731 FAM174AQ8TBP5 190 aa7.89□□□□□ -1.15
RNU4-55P-201ENST00000410731 TLL2Q9Y6L7 1015 aa7.89□□□□□ -1.15
RNU4-55P-201ENST00000410731 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 NR6A1Q15406 480 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 SH3BP5LQ7L8J4 393 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 SH3RF1Q7Z6J0 888 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 C1QTNF2Q9BXJ5 285 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 HMX1Q9NP08 348 aaPredicted RBP7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 AAASQ9NRG9 546 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
RNU4-55P-201ENST00000410731 ST8SIA5O15466 376 aa7.87□□□□□ -1.15
RNU4-55P-201ENST00000410731 AGERQ15109 404 aa7.87□□□□□ -1.15
RNU4-55P-201ENST00000410731 HPS1Q92902 700 aa7.86□□□□□ -1.15
RNU4-55P-201ENST00000410731 WASF2Q9Y6W5 498 aa7.86□□□□□ -1.15
RNU4-55P-201ENST00000410731 AXIN1O15169 862 aa7.85□□□□□ -1.15
RNU4-55P-201ENST00000410731 PDXDC2PQ6P474 469 aa7.85□□□□□ -1.15
RNU4-55P-201ENST00000410731 PNMA1Q8ND90 353 aa7.85□□□□□ -1.15
RNU4-55P-201ENST00000410731 CDK15Q96Q40 435 aa7.85□□□□□ -1.15
RNU4-55P-201ENST00000410731 TRMT44Q8IYL2 757 aaKnown RBP7.84□□□□□ -1.15
RNU4-55P-201ENST00000410731 BANK1Q8NDB2 785 aa7.84□□□□□ -1.15
RNU4-55P-201ENST00000410731 EPS8L1Q8TE68 723 aa7.84□□□□□ -1.15
RNU4-55P-201ENST00000410731 MAGEB6P1A0A0J9YX57 407 aa7.83□□□□□ -1.16
RNU4-55P-201ENST00000410731 SOCS7O14512 581 aa7.83□□□□□ -1.16
RNU4-55P-201ENST00000410731 ADH1CP00326 375 aa7.83□□□□□ -1.16
RNU4-55P-201ENST00000410731 TRIM34Q9BYJ4 488 aa7.83□□□□□ -1.16
RNU4-55P-201ENST00000410731 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
RNU4-55P-201ENST00000410731 ERFEQ4G0M1 354 aa7.82□□□□□ -1.16
RNU4-55P-201ENST00000410731 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
RNU4-55P-201ENST00000410731 CARD14Q9BXL6 1004 aa7.82□□□□□ -1.16
RNU4-55P-201ENST00000410731 MAP4K5Q9Y4K4 846 aa7.82□□□□□ -1.16
RNU4-55P-201ENST00000410731 NNTQ13423 1086 aa7.81□□□□□ -1.16
RNU4-55P-201ENST00000410731 GJD4Q96KN9 370 aaPredicted RBP7.81□□□□□ -1.16
RNU4-55P-201ENST00000410731 PTK2Q05397 1052 aa7.8□□□□□ -1.16
RNU4-55P-201ENST00000410731 NR5A1Q13285 461 aa7.8□□□□□ -1.16
RNU4-55P-201ENST00000410731 ARID5BQ14865 1188 aa7.8□□□□□ -1.16
RNU4-55P-201ENST00000410731 OCSTAMPQ9BR26 566 aa7.8□□□□□ -1.16
RNU4-55P-201ENST00000410731 GRM5P41594 1212 aa7.79□□□□□ -1.16
RNU4-55P-201ENST00000410731 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
RNU4-55P-201ENST00000410731 MTMR14Q8NCE2 650 aa7.79□□□□□ -1.16
RNU4-55P-201ENST00000410731 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
RNU4-55P-201ENST00000410731 APBB1O00213 710 aa7.78□□□□□ -1.16
RNU4-55P-201ENST00000410731 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
RNU4-55P-201ENST00000410731 ZBTB33Q86T24 672 aa7.78□□□□□ -1.16
RNU4-55P-201ENST00000410731 SLC10A4Q96EP9 437 aa7.78□□□□□ -1.16
RNU4-55P-201ENST00000410731 ATP13A2Q9NQ11 1180 aa7.78□□□□□ -1.16
RNU4-55P-201ENST00000410731 CDV3Q9UKY7 258 aaKnown RBP7.78□□□□□ -1.16
RNU4-55P-201ENST00000410731 CAPN5O15484 640 aaPredicted RBP7.77□□□□□ -1.17
RNU4-55P-201ENST00000410731 FSHRP23945 695 aa7.77□□□□□ -1.17
RNU4-55P-201ENST00000410731 ADAM32Q8TC27 787 aa7.77□□□□□ -1.17
RNU4-55P-201ENST00000410731 POTECB2RU33 542 aa7.76□□□□□ -1.17
RNU4-55P-201ENST00000410731 NR3C2P08235 984 aa7.76□□□□□ -1.17
RNU4-55P-201ENST00000410731 TIMP2P16035 220 aa7.76□□□□□ -1.17
RNU4-55P-201ENST00000410731 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
RNU4-55P-201ENST00000410731 SNRKQ9NRH2 765 aa7.76□□□□□ -1.17
RNU4-55P-201ENST00000410731 NDUFB9Q9Y6M9 179 aa7.76□□□□□ -1.17
RNU4-55P-201ENST00000410731 WDR4P57081 412 aaKnown RBP7.75□□□□□ -1.17
RNU4-55P-201ENST00000410731 GMPR2Q9P2T1 348 aaKnown RBP7.75□□□□□ -1.17
RNU4-55P-201ENST00000410731 GPR37L1O60883 481 aa7.74□□□□□ -1.17
RNU4-55P-201ENST00000410731 SENP2Q9HC62 589 aa7.74□□□□□ -1.17
RNU4-55P-201ENST00000410731 ZBBXA8MT70 800 aa7.73□□□□□ -1.17
RNU4-55P-201ENST00000410731 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
RNU4-55P-201ENST00000410731 CCDC116Q8IYX3 515 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms