RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 SEC24BO95487 1268 aa21.19■□□□□ 0.98
PDK1-203ENST00000410055 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
PDK1-203ENST00000410055 TULP4Q9NRJ4 1543 aa21.19■□□□□ 0.98
PDK1-203ENST00000410055 CDK19Q9BWU1 502 aa21.19■□□□□ 0.98
PDK1-203ENST00000410055 SMC4Q9NTJ3 1288 aa21.19■□□□□ 0.98
PDK1-203ENST00000410055 CAMSAP1Q5T5Y3 1602 aa21.18■□□□□ 0.98
PDK1-203ENST00000410055 PRDM4Q9UKN5 801 aa21.17■□□□□ 0.98
PDK1-203ENST00000410055 RIPK4P57078 832 aa21.16■□□□□ 0.98
PDK1-203ENST00000410055 TMPOP42166 694 aaKnown RBP21.16■□□□□ 0.98
PDK1-203ENST00000410055 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
PDK1-203ENST00000410055 CFAP74Q9C0B2 1584 aa21.15■□□□□ 0.98
PDK1-203ENST00000410055 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
PDK1-203ENST00000410055 NEXMIFQ5QGS0 1516 aa21.15■□□□□ 0.98
PDK1-203ENST00000410055 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
PDK1-203ENST00000410055 ITPRIPQ8IWB1 547 aa21.13■□□□□ 0.97
PDK1-203ENST00000410055 PDZRN3Q9UPQ7 1066 aa21.13■□□□□ 0.97
PDK1-203ENST00000410055 ZKSCAN2Q63HK3 967 aa21.13■□□□□ 0.97
PDK1-203ENST00000410055 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
PDK1-203ENST00000410055 DIP2CQ9Y2E4 1556 aa21.13■□□□□ 0.97
PDK1-203ENST00000410055 DIAPH1O60610 1272 aaKnown RBP21.12■□□□□ 0.97
PDK1-203ENST00000410055 HMOX1P09601 288 aa21.12■□□□□ 0.97
PDK1-203ENST00000410055 NEO1Q92859 1461 aa21.12■□□□□ 0.97
PDK1-203ENST00000410055 DZIP1LQ8IYY4 767 aaKnown RBP21.12■□□□□ 0.97
PDK1-203ENST00000410055 ZC3H13Q5T200 1668 aaKnown RBP21.11■□□□□ 0.97
PDK1-203ENST00000410055 CCDC27Q2M243 656 aa21.11■□□□□ 0.97
PDK1-203ENST00000410055 SSH1Q8WYL5 1049 aa21.11■□□□□ 0.97
PDK1-203ENST00000410055 TRIM35Q9UPQ4 493 aa21.1■□□□□ 0.97
PDK1-203ENST00000410055 ARHGEF28Q8N1W1 1705 aaKnown RBP21.1■□□□□ 0.97
PDK1-203ENST00000410055 RWDD1Q9H446 243 aaPredicted RBP21.09■□□□□ 0.97
PDK1-203ENST00000410055 MYO5BQ9ULV0 1848 aa21.09■□□□□ 0.97
PDK1-203ENST00000410055 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
PDK1-203ENST00000410055 YTHDC2Q9H6S0 1430 aaKnown RBP21.09■□□□□ 0.97
PDK1-203ENST00000410055 ABCC11Q96J66 1382 aa21.09■□□□□ 0.97
PDK1-203ENST00000410055 MVPQ14764 893 aaKnown RBP21.09■□□□□ 0.97
PDK1-203ENST00000410055 THUMPD2Q9BTF0 503 aaKnown RBP21.09■□□□□ 0.97
PDK1-203ENST00000410055 NSD2O96028 1365 aa21.08■□□□□ 0.97
PDK1-203ENST00000410055 ELL2O00472 640 aaPredicted RBP21.08■□□□□ 0.97
PDK1-203ENST00000410055 PUS7Q96PZ0 661 aaKnown RBP21.08■□□□□ 0.97
PDK1-203ENST00000410055 PLEKHF1Q96S99 279 aa21.08■□□□□ 0.97
PDK1-203ENST00000410055 SLKQ9H2G2 1235 aaPredicted RBP21.08■□□□□ 0.97
PDK1-203ENST00000410055 NOB1Q9ULX3 412 aaKnown RBP21.08■□□□□ 0.96
PDK1-203ENST00000410055 PIK3C2BO00750 1634 aa21.08■□□□□ 0.96
PDK1-203ENST00000410055 ATAD2Q6PL18 1390 aa21.07■□□□□ 0.96
PDK1-203ENST00000410055 NINLQ9Y2I6 1382 aa21.07■□□□□ 0.96
PDK1-203ENST00000410055 TRIM27P14373 513 aa21.07■□□□□ 0.96
PDK1-203ENST00000410055 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
PDK1-203ENST00000410055 CLCN1P35523 988 aa21.06■□□□□ 0.96
PDK1-203ENST00000410055 NCKAP5LQ9HCH0 1330 aa21.06■□□□□ 0.96
PDK1-203ENST00000410055 ZRANB1Q9UGI0 708 aa21.06■□□□□ 0.96
PDK1-203ENST00000410055 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
PDK1-203ENST00000410055 SPRYD3Q8NCJ5 442 aa21.05■□□□□ 0.96
PDK1-203ENST00000410055 NUTM2FA1L443 756 aa21.05■□□□□ 0.96
PDK1-203ENST00000410055 TXNDC2Q86VQ3 553 aa21.04■□□□□ 0.96
PDK1-203ENST00000410055 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
PDK1-203ENST00000410055 EMILIN1Q9Y6C2 1016 aa21.03■□□□□ 0.96
PDK1-203ENST00000410055 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
PDK1-203ENST00000410055 ARHGAP31Q2M1Z3 1444 aa21.03■□□□□ 0.96
PDK1-203ENST00000410055 USP19O94966 1318 aa21.02■□□□□ 0.96
PDK1-203ENST00000410055 PANK2Q9BZ23 570 aa21.02■□□□□ 0.96
PDK1-203ENST00000410055 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.96
PDK1-203ENST00000410055 TMEM57Q8N5G2 664 aa21.02■□□□□ 0.96
PDK1-203ENST00000410055 BBXQ8WY36 941 aaPredicted RBP21.02■□□□□ 0.96
PDK1-203ENST00000410055 PTPRMP28827 1452 aa21.01■□□□□ 0.95
PDK1-203ENST00000410055 ATF7IPQ6VMQ6 1270 aa21.01■□□□□ 0.95
PDK1-203ENST00000410055 NME9Q86XW9 330 aa21.01■□□□□ 0.95
PDK1-203ENST00000410055 ARID3AQ99856 593 aa21.01■□□□□ 0.95
PDK1-203ENST00000410055 PHACTR3Q96KR7 559 aa21■□□□□ 0.95
PDK1-203ENST00000410055 POLKQ9UBT6 870 aa21■□□□□ 0.95
PDK1-203ENST00000410055 PDCL3Q9H2J4 239 aa21■□□□□ 0.95
PDK1-203ENST00000410055 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
PDK1-203ENST00000410055 SOX12O15370 315 aa20.99■□□□□ 0.95
PDK1-203ENST00000410055 RRS1Q15050 365 aaKnown RBP20.99■□□□□ 0.95
PDK1-203ENST00000410055 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
PDK1-203ENST00000410055 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
PDK1-203ENST00000410055 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
PDK1-203ENST00000410055 ZHX1Q9UKY1 873 aaPredicted RBP20.97■□□□□ 0.95
PDK1-203ENST00000410055 CHMP4BQ9H444 224 aaKnown RBP20.97■□□□□ 0.95
PDK1-203ENST00000410055 DDX19BQ9UMR2 479 aa20.97■□□□□ 0.95
PDK1-203ENST00000410055 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
PDK1-203ENST00000410055 ZFYVE9O95405 1425 aa20.96■□□□□ 0.95
PDK1-203ENST00000410055 XRCC6P12956 609 aaKnown RBP eCLIP20.96■□□□□ 0.951e-8■■■■□ 21.8
PDK1-203ENST00000410055 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
PDK1-203ENST00000410055 USP32Q8NFA0 1604 aa20.96■□□□□ 0.95
PDK1-203ENST00000410055 PREX1Q8TCU6 1659 aa20.95■□□□□ 0.94
PDK1-203ENST00000410055 BECN1Q14457 450 aa20.95■□□□□ 0.94
PDK1-203ENST00000410055 C1orf115Q9H7X2 142 aa20.95■□□□□ 0.94
PDK1-203ENST00000410055 FCHSD2O94868 740 aa20.94■□□□□ 0.94
PDK1-203ENST00000410055 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
PDK1-203ENST00000410055 GZF1Q9H116 711 aaPredicted RBP20.93■□□□□ 0.94
PDK1-203ENST00000410055 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
PDK1-203ENST00000410055 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
PDK1-203ENST00000410055 LNPKQ9C0E8 428 aa20.93■□□□□ 0.94
PDK1-203ENST00000410055 FAM83GA6ND36 823 aa20.92■□□□□ 0.94
PDK1-203ENST00000410055 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
PDK1-203ENST00000410055 CT47B1P0C2W7 299 aaPredicted RBP20.91■□□□□ 0.94
PDK1-203ENST00000410055 NAP1L2Q9ULW6 460 aaPredicted RBP20.91■□□□□ 0.94
PDK1-203ENST00000410055 RIMS2Q9UQ26 1411 aa20.91■□□□□ 0.94
PDK1-203ENST00000410055 WASLO00401 505 aaPredicted RBP20.9■□□□□ 0.94
PDK1-203ENST00000410055 NUDT16Q96DE0 195 aaKnown RBP20.9■□□□□ 0.94
PDK1-203ENST00000410055 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms