RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 AMOTL2Q9Y2J4 779 aa30.86■■■□□ 2.53
PMS1-205ENST00000409985 PAK3O75914 559 aaPredicted RBP30.85■■■□□ 2.53
PMS1-205ENST00000409985 PIK3R4Q99570 1358 aa30.85■■■□□ 2.53
PMS1-205ENST00000409985 MTHFSP49914 203 aa30.84■■■□□ 2.53
PMS1-205ENST00000409985 TECPR2O15040 1411 aa30.83■■■□□ 2.53
PMS1-205ENST00000409985 ROBO2Q9HCK4 1378 aa30.83■■■□□ 2.53
PMS1-205ENST00000409985 KCNA6P17658 529 aa30.83■■■□□ 2.53
PMS1-205ENST00000409985 KNDC1Q76NI1 1749 aa30.81■■■□□ 2.52
PMS1-205ENST00000409985 ANKRD26Q9UPS8 1709 aa30.81■■■□□ 2.52
PMS1-205ENST00000409985 ADGRB2O60241 1585 aa30.8■■■□□ 2.52
PMS1-205ENST00000409985 WAPLQ7Z5K2 1190 aa30.8■■■□□ 2.52
PMS1-205ENST00000409985 TCP11L2Q8N4U5 519 aa30.8■■■□□ 2.52
PMS1-205ENST00000409985 DMRT2Q9Y5R5 561 aa30.8■■■□□ 2.52
PMS1-205ENST00000409985 NWD1Q149M9 1564 aa30.79■■■□□ 2.52
PMS1-205ENST00000409985 CPS1P31327 1500 aa30.79■■■□□ 2.52
PMS1-205ENST00000409985 ZNF335Q9H4Z2 1342 aaPredicted RBP30.78■■■□□ 2.52
PMS1-205ENST00000409985 BCAR3O75815 825 aa30.78■■■□□ 2.52
PMS1-205ENST00000409985 DLC1Q96QB1 1528 aa30.77■■■□□ 2.52
PMS1-205ENST00000409985 PRAM1Q96QH2 718 aa30.76■■■□□ 2.52
PMS1-205ENST00000409985 A0A1W2PP64 1363 aa30.76■■■□□ 2.51
PMS1-205ENST00000409985 DDRGK1Q96HY6 314 aa30.75■■■□□ 2.51
PMS1-205ENST00000409985 CABP2Q9NPB3 220 aa30.75■■■□□ 2.51
PMS1-205ENST00000409985 TERF2IPQ9NYB0 399 aa30.75■■■□□ 2.51
PMS1-205ENST00000409985 RBM33Q96EV2 1170 aaKnown RBP30.74■■■□□ 2.51
PMS1-205ENST00000409985 SAFB2Q14151 953 aaKnown RBP eCLIP30.74■■■□□ 2.51
PMS1-205ENST00000409985 PTCH1Q13635 1447 aa30.73■■■□□ 2.51
PMS1-205ENST00000409985 CT47B1P0C2W7 299 aaPredicted RBP30.72■■■□□ 2.51
PMS1-205ENST00000409985 TNNT2P45379 298 aaPredicted RBP30.72■■■□□ 2.51
PMS1-205ENST00000409985 FAM161AQ3B820 660 aa30.71■■■□□ 2.51
PMS1-205ENST00000409985 FAM135BQ49AJ0 1406 aa30.71■■■□□ 2.51
PMS1-205ENST00000409985 MYH16Q9H6N6 1097 aa30.7■■■□□ 2.51
PMS1-205ENST00000409985 SIRT1Q96EB6 747 aa30.7■■■□□ 2.5
PMS1-205ENST00000409985 COL3A1P02461 1466 aaPredicted RBP30.69■■■□□ 2.5
PMS1-205ENST00000409985 CD163L1Q9NR16 1453 aa30.69■■■□□ 2.5
PMS1-205ENST00000409985 RARSP54136 660 aaKnown RBP30.69■■■□□ 2.5
PMS1-205ENST00000409985 SRPK2P78362 688 aaKnown RBP30.69■■■□□ 2.5
PMS1-205ENST00000409985 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.68■■■□□ 2.5
PMS1-205ENST00000409985 CLUAP1Q96AJ1 413 aa30.65■■■□□ 2.5
PMS1-205ENST00000409985 POGKQ9P215 609 aa30.65■■■□□ 2.5
PMS1-205ENST00000409985 NPM2Q86SE8 214 aaKnown RBP30.64■■■□□ 2.5
PMS1-205ENST00000409985 U2AF1L5P0DN76 240 aaPredicted RBP30.63■■■□□ 2.49
PMS1-205ENST00000409985 U2AF1Q01081 240 aaKnown RBP eCLIP30.63■■■□□ 2.49
PMS1-205ENST00000409985 CANXP27824 592 aaKnown RBP30.62■■■□□ 2.49
PMS1-205ENST00000409985 HDGFL2Q7Z4V5 671 aaPredicted RBP30.62■■■□□ 2.49
PMS1-205ENST00000409985 PNPLA6Q8IY17 1366 aa30.62■■■□□ 2.49
PMS1-205ENST00000409985 MINK1Q8N4C8 1332 aaPredicted RBP30.62■■■□□ 2.49
PMS1-205ENST00000409985 PNNQ9H307 717 aaKnown RBP30.61■■■□□ 2.49
PMS1-205ENST00000409985 LTBP4Q8N2S1 1624 aa30.61■■■□□ 2.49
PMS1-205ENST00000409985 FYB1O15117 783 aa30.61■■■□□ 2.49
PMS1-205ENST00000409985 XIRP1Q702N8 1843 aaKnown RBP30.6■■■□□ 2.49
PMS1-205ENST00000409985 IL16Q14005 1332 aa30.6■■■□□ 2.49
PMS1-205ENST00000409985 C8orf34Q49A92 452 aa30.6■■■□□ 2.49
PMS1-205ENST00000409985 RRP7AQ9Y3A4 280 aaKnown RBP30.6■■■□□ 2.49
PMS1-205ENST00000409985 NEUROD2Q15784 382 aa30.59■■■□□ 2.49
PMS1-205ENST00000409985 PROSER2Q86WR7 435 aaPredicted RBP30.59■■■□□ 2.49
PMS1-205ENST00000409985 PLEKHF1Q96S99 279 aa30.59■■■□□ 2.49
PMS1-205ENST00000409985 LRRC7Q96NW7 1537 aa30.59■■■□□ 2.49
PMS1-205ENST00000409985 MAPK8IP3Q9UPT6 1336 aa30.59■■■□□ 2.49
PMS1-205ENST00000409985 KIF20BQ96Q89 1820 aa30.59■■■□□ 2.49
PMS1-205ENST00000409985 ATP7BP35670 1465 aa30.59■■■□□ 2.49
PMS1-205ENST00000409985 CDC42BPGQ6DT37 1551 aa30.58■■■□□ 2.49
PMS1-205ENST00000409985 NALCNQ8IZF0 1738 aa30.58■■■□□ 2.49
PMS1-205ENST00000409985 TMEM94Q12767 1356 aa30.58■■■□□ 2.49
PMS1-205ENST00000409985 PMFBP1Q8TBY8 1022 aa30.58■■■□□ 2.49
PMS1-205ENST00000409985 SKAP1Q86WV1 359 aa30.56■■■□□ 2.48
PMS1-205ENST00000409985 USP35Q9P2H5 1018 aa30.56■■■□□ 2.48
PMS1-205ENST00000409985 CDK19Q9BWU1 502 aa30.55■■■□□ 2.48
PMS1-205ENST00000409985 VIRMAQ69YN4 1812 aaKnown RBP30.54■■■□□ 2.48
PMS1-205ENST00000409985 PPM1GO15355 546 aaPredicted RBP30.54■■■□□ 2.48
PMS1-205ENST00000409985 IGHDP01880 384 aa30.53■■■□□ 2.48
PMS1-205ENST00000409985 PANK1Q8TE04 598 aa30.53■■■□□ 2.48
PMS1-205ENST00000409985 GGNBP2Q9H3C7 697 aa30.53■■■□□ 2.48
PMS1-205ENST00000409985 COG6Q9Y2V7 657 aa30.53■■■□□ 2.48
PMS1-205ENST00000409985 TMPOP42166 694 aaKnown RBP30.52■■■□□ 2.48
PMS1-205ENST00000409985 RTL5Q5HYW3 569 aaPredicted RBP30.51■■■□□ 2.47
PMS1-205ENST00000409985 ADGRL3Q9HAR2 1447 aa30.5■■■□□ 2.47
PMS1-205ENST00000409985 FRAT1Q92837 279 aaPredicted RBP30.48■■■□□ 2.47
PMS1-205ENST00000409985 DIAPH1O60610 1272 aaKnown RBP30.48■■■□□ 2.47
PMS1-205ENST00000409985 NBR1Q14596 966 aa30.48■■■□□ 2.47
PMS1-205ENST00000409985 WASLO00401 505 aaPredicted RBP30.46■■■□□ 2.47
PMS1-205ENST00000409985 TRIM35Q9UPQ4 493 aa30.46■■■□□ 2.47
PMS1-205ENST00000409985 RGS3P49796 1198 aa30.45■■■□□ 2.47
PMS1-205ENST00000409985 CABP1Q9NZU7 370 aa30.45■■■□□ 2.47
PMS1-205ENST00000409985 FCHSD2O94868 740 aa30.44■■■□□ 2.46
PMS1-205ENST00000409985 ZKSCAN2Q63HK3 967 aa30.44■■■□□ 2.46
PMS1-205ENST00000409985 U2SURPO15042 1029 aaKnown RBP30.44■■■□□ 2.46
PMS1-205ENST00000409985 DEKP35659 375 aaKnown RBP30.44■■■□□ 2.46
PMS1-205ENST00000409985 NCOA3Q9Y6Q9 1424 aa30.43■■■□□ 2.46
PMS1-205ENST00000409985 PRR36Q9H6K5 1346 aa30.42■■■□□ 2.46
PMS1-205ENST00000409985 C14orf37Q86TY3 774 aa30.42■■■□□ 2.46
PMS1-205ENST00000409985 RWDD1Q9H446 243 aaPredicted RBP30.42■■■□□ 2.46
PMS1-205ENST00000409985 CPSF1Q10570 1443 aaKnown RBP30.42■■■□□ 2.46
PMS1-205ENST00000409985 NUTM2FA1L443 756 aa30.41■■■□□ 2.46
PMS1-205ENST00000409985 RLBP1P12271 317 aa30.41■■■□□ 2.46
PMS1-205ENST00000409985 MVPQ14764 893 aaKnown RBP30.41■■■□□ 2.46
PMS1-205ENST00000409985 C19orf44Q9H6X5 657 aa30.41■■■□□ 2.46
PMS1-205ENST00000409985 EDC4Q6P2E9 1401 aaKnown RBP30.4■■■□□ 2.46
PMS1-205ENST00000409985 FMN2Q9NZ56 1722 aa30.39■■■□□ 2.46
PMS1-205ENST00000409985 DZIP1LQ8IYY4 767 aaKnown RBP30.38■■■□□ 2.45
PMS1-205ENST00000409985 ZNF428Q96B54 188 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms