RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 DCCP43146 1447 aa13.73□□□□□ -0.21
SNORD88C-201ENST00000408061 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
SNORD88C-201ENST00000408061 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
SNORD88C-201ENST00000408061 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
SNORD88C-201ENST00000408061 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.21
SNORD88C-201ENST00000408061 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
SNORD88C-201ENST00000408061 NRKQ7Z2Y5 1582 aa13.71□□□□□ -0.22
SNORD88C-201ENST00000408061 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
SNORD88C-201ENST00000408061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNORD88C-201ENST00000408061 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
SNORD88C-201ENST00000408061 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
SNORD88C-201ENST00000408061 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
SNORD88C-201ENST00000408061 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
SNORD88C-201ENST00000408061 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
SNORD88C-201ENST00000408061 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
SNORD88C-201ENST00000408061 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
SNORD88C-201ENST00000408061 TNNT2P45379 298 aaPredicted RBP13.67□□□□□ -0.22
SNORD88C-201ENST00000408061 HSPA2P54652 639 aa13.67□□□□□ -0.22
SNORD88C-201ENST00000408061 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 NME9Q86XW9 330 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 KIF1AQ12756 1690 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 SHPRHQ149N8 1683 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 ATF3P18847 181 aa13.65□□□□□ -0.22
SNORD88C-201ENST00000408061 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
SNORD88C-201ENST00000408061 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
SNORD88C-201ENST00000408061 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
SNORD88C-201ENST00000408061 COL3A1P02461 1466 aaPredicted RBP13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 MSH6P52701 1360 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 PSME1Q06323 249 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 FCHSD2O94868 740 aa13.62□□□□□ -0.23
SNORD88C-201ENST00000408061 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
SNORD88C-201ENST00000408061 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
SNORD88C-201ENST00000408061 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 NEFLP07196 543 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 NEFMP07197 916 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 ERICH6BQ5W0A0 696 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 NLRP6P59044 892 aa13.6□□□□□ -0.23
SNORD88C-201ENST00000408061 MST1RQ04912 1400 aa13.6□□□□□ -0.23
SNORD88C-201ENST00000408061 ZNF521Q96K83 1311 aa13.6□□□□□ -0.23
SNORD88C-201ENST00000408061 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 APAF1O14727 1248 aa13.58□□□□□ -0.24
SNORD88C-201ENST00000408061 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 IL13P35225 146 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 WDR63Q8IWG1 891 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 SBNO1A3KN83 1393 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 FLT4P35916 1363 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 E9PSI1 815 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 PLEKHF1Q96S99 279 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 FOXO3O43524 673 aa13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 AMPHP49418 695 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 IL16Q14005 1332 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 TMPOP42166 694 aaKnown RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 SLIT3O75094 1523 aa13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 USP19O94966 1318 aa13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms