RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 PRR36Q9H6K5 1346 aa11.14□□□□□ -0.63
NFIA-208ENST00000407417 WASLO00401 505 aaPredicted RBP11.14□□□□□ -0.63
NFIA-208ENST00000407417 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
NFIA-208ENST00000407417 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
NFIA-208ENST00000407417 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
NFIA-208ENST00000407417 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
NFIA-208ENST00000407417 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
NFIA-208ENST00000407417 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
NFIA-208ENST00000407417 LRP6O75581 1613 aa11.13□□□□□ -0.63
NFIA-208ENST00000407417 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
NFIA-208ENST00000407417 NPHP3Q7Z494 1330 aa11.13□□□□□ -0.63
NFIA-208ENST00000407417 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
NFIA-208ENST00000407417 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
NFIA-208ENST00000407417 CENPJQ9HC77 1338 aaPredicted RBP11.13□□□□□ -0.63
NFIA-208ENST00000407417 PXDNQ92626 1479 aa11.12□□□□□ -0.63
NFIA-208ENST00000407417 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
NFIA-208ENST00000407417 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
NFIA-208ENST00000407417 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
NFIA-208ENST00000407417 ANKARQ7Z5J8 1434 aa11.12□□□□□ -0.63
NFIA-208ENST00000407417 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
NFIA-208ENST00000407417 TULP4Q9NRJ4 1543 aa11.12□□□□□ -0.63
NFIA-208ENST00000407417 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
NFIA-208ENST00000407417 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
NFIA-208ENST00000407417 GPRASP1Q5JY77 1395 aa11.11□□□□□ -0.63
NFIA-208ENST00000407417 NUDT16Q96DE0 195 aaKnown RBP11.1□□□□□ -0.63
NFIA-208ENST00000407417 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
NFIA-208ENST00000407417 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
NFIA-208ENST00000407417 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
NFIA-208ENST00000407417 RALGAPBQ86X10 1494 aa11.1□□□□□ -0.63
NFIA-208ENST00000407417 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
NFIA-208ENST00000407417 MEX3CQ5U5Q3 659 aaKnown RBP11.09□□□□□ -0.63
NFIA-208ENST00000407417 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
NFIA-208ENST00000407417 ATP7BP35670 1465 aa11.09□□□□□ -0.63
NFIA-208ENST00000407417 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
NFIA-208ENST00000407417 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.63
NFIA-208ENST00000407417 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
NFIA-208ENST00000407417 PDE4AP27815 886 aa11.08□□□□□ -0.64
NFIA-208ENST00000407417 SRPK2P78362 688 aaKnown RBP11.08□□□□□ -0.64
NFIA-208ENST00000407417 PSME1Q06323 249 aa11.08□□□□□ -0.64
NFIA-208ENST00000407417 LAS1LQ9Y4W2 734 aaKnown RBP11.08□□□□□ -0.64
NFIA-208ENST00000407417 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
NFIA-208ENST00000407417 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
NFIA-208ENST00000407417 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
NFIA-208ENST00000407417 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
NFIA-208ENST00000407417 FRAT1Q92837 279 aaPredicted RBP11.07□□□□□ -0.64
NFIA-208ENST00000407417 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
NFIA-208ENST00000407417 POTEAQ6S8J7 498 aa11.06□□□□□ -0.64
NFIA-208ENST00000407417 NGDNQ8NEJ9 315 aaKnown RBP11.06□□□□□ -0.64
NFIA-208ENST00000407417 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
NFIA-208ENST00000407417 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
NFIA-208ENST00000407417 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
NFIA-208ENST00000407417 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
NFIA-208ENST00000407417 HSP90AA2PQ14568 343 aaPredicted RBP11.05□□□□□ -0.64
NFIA-208ENST00000407417 COL22A1Q8NFW1 1626 aaPredicted RBP11.04□□□□□ -0.64
NFIA-208ENST00000407417 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
NFIA-208ENST00000407417 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
NFIA-208ENST00000407417 ACEP12821 1306 aa11.04□□□□□ -0.64
NFIA-208ENST00000407417 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
NFIA-208ENST00000407417 TOPAZ1Q8N9V7 1692 aa11.03□□□□□ -0.64
NFIA-208ENST00000407417 AFF2P51816 1311 aa11.03□□□□□ -0.64
NFIA-208ENST00000407417 PPIP5K1Q6PFW1 1433 aa11.03□□□□□ -0.64
NFIA-208ENST00000407417 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
NFIA-208ENST00000407417 ITSN1Q15811 1721 aa11.02□□□□□ -0.64
NFIA-208ENST00000407417 TRPM3Q9HCF6 1732 aaPredicted RBP11.02□□□□□ -0.64
NFIA-208ENST00000407417 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.64
NFIA-208ENST00000407417 MRS2Q9HD23 443 aa11.02□□□□□ -0.64
NFIA-208ENST00000407417 CABP1Q9NZU7 370 aa11.02□□□□□ -0.64
NFIA-208ENST00000407417 ST20-MTHFSA0A0A6YYL1 179 aa11.02□□□□□ -0.65
NFIA-208ENST00000407417 POLR3AO14802 1390 aaPredicted RBP11.02□□□□□ -0.65
NFIA-208ENST00000407417 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
NFIA-208ENST00000407417 ARHGEF10O15013 1369 aa11□□□□□ -0.65
NFIA-208ENST00000407417 HSP90AA1P07900 732 aaKnown RBP11□□□□□ -0.65
NFIA-208ENST00000407417 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
NFIA-208ENST00000407417 SBNO2Q9Y2G9 1366 aa11□□□□□ -0.65
NFIA-208ENST00000407417 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
NFIA-208ENST00000407417 ZNF772Q68DY9 489 aaPredicted RBP11□□□□□ -0.65
NFIA-208ENST00000407417 USP47Q96K76 1375 aa10.99□□□□□ -0.65
NFIA-208ENST00000407417 CLCN1P35523 988 aa10.99□□□□□ -0.65
NFIA-208ENST00000407417 TESK2Q96S53 571 aa10.99□□□□□ -0.65
NFIA-208ENST00000407417 ALS2Q96Q42 1657 aa10.99□□□□□ -0.65
NFIA-208ENST00000407417 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■□□ 16.4
NFIA-208ENST00000407417 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
NFIA-208ENST00000407417 CCDC7Q96M83 1385 aa10.98□□□□□ -0.65
NFIA-208ENST00000407417 NPM2Q86SE8 214 aaKnown RBP10.97□□□□□ -0.65
NFIA-208ENST00000407417 USP21Q9UK80 565 aa10.97□□□□□ -0.65
NFIA-208ENST00000407417 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
NFIA-208ENST00000407417 QTRT2Q9H974 415 aaKnown RBP10.97□□□□□ -0.65
NFIA-208ENST00000407417 ABCA3Q99758 1704 aa10.96□□□□□ -0.65
NFIA-208ENST00000407417 USP6P35125 1406 aa10.96□□□□□ -0.65
NFIA-208ENST00000407417 FNBP4Q8N3X1 1017 aaPredicted RBP10.96□□□□□ -0.65
NFIA-208ENST00000407417 HSPA5P11021 654 aaKnown RBP10.96□□□□□ -0.66
NFIA-208ENST00000407417 CCDC184Q52MB2 194 aa10.96□□□□□ -0.66
NFIA-208ENST00000407417 ABTB2Q8N961 1025 aa10.96□□□□□ -0.66
NFIA-208ENST00000407417 TMC1Q8TDI8 760 aa10.96□□□□□ -0.66
NFIA-208ENST00000407417 RXRBP28702 533 aa10.95□□□□□ -0.66
NFIA-208ENST00000407417 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
NFIA-208ENST00000407417 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
NFIA-208ENST00000407417 MARF1Q9Y4F3 1742 aaKnown RBP10.95□□□□□ -0.66
NFIA-208ENST00000407417 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
NFIA-208ENST00000407417 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms