RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 FTSJ3Q8IY81 847 aaKnown RBP23.56■■□□□ 1.36
EWSR1-207ENST00000406548 DZIP1LQ8IYY4 767 aaKnown RBP23.56■■□□□ 1.36
EWSR1-207ENST00000406548 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
EWSR1-207ENST00000406548 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
EWSR1-207ENST00000406548 STK26Q9P289 416 aa23.56■■□□□ 1.36
EWSR1-207ENST00000406548 GGNBP2Q9H3C7 697 aa23.55■■□□□ 1.36
EWSR1-207ENST00000406548 U2SURPO15042 1029 aaKnown RBP23.55■■□□□ 1.36
EWSR1-207ENST00000406548 TMPOP42166 694 aaKnown RBP23.54■■□□□ 1.36
EWSR1-207ENST00000406548 UPF2Q9HAU5 1272 aaKnown RBP23.54■■□□□ 1.36
EWSR1-207ENST00000406548 CD163L1Q9NR16 1453 aa23.53■■□□□ 1.36
EWSR1-207ENST00000406548 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.36
EWSR1-207ENST00000406548 SMC4Q9NTJ3 1288 aa23.52■■□□□ 1.36
EWSR1-207ENST00000406548 TERF2IPQ9NYB0 399 aa23.52■■□□□ 1.36
EWSR1-207ENST00000406548 TRIM35Q9UPQ4 493 aa23.52■■□□□ 1.36
EWSR1-207ENST00000406548 TBC1D32Q96NH3 1257 aa23.51■■□□□ 1.35
EWSR1-207ENST00000406548 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
EWSR1-207ENST00000406548 IL16Q14005 1332 aa23.5■■□□□ 1.35
EWSR1-207ENST00000406548 MINK1Q8N4C8 1332 aaPredicted RBP23.5■■□□□ 1.35
EWSR1-207ENST00000406548 FYB1O15117 783 aa23.49■■□□□ 1.35
EWSR1-207ENST00000406548 PRAM1Q96QH2 718 aa23.49■■□□□ 1.35
EWSR1-207ENST00000406548 KIF20BQ96Q89 1820 aa23.49■■□□□ 1.35
EWSR1-207ENST00000406548 YEATS2Q9ULM3 1422 aa23.49■■□□□ 1.35
EWSR1-207ENST00000406548 TRIM27P14373 513 aa23.48■■□□□ 1.35
EWSR1-207ENST00000406548 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
EWSR1-207ENST00000406548 SSH1Q8WYL5 1049 aa23.47■■□□□ 1.35
EWSR1-207ENST00000406548 DDX19BQ9UMR2 479 aa23.47■■□□□ 1.35
EWSR1-207ENST00000406548 POGKQ9P215 609 aa23.46■■□□□ 1.35
EWSR1-207ENST00000406548 ATF7IPQ6VMQ6 1270 aa23.45■■□□□ 1.35
EWSR1-207ENST00000406548 PNPLA6Q8IY17 1366 aa23.45■■□□□ 1.34
EWSR1-207ENST00000406548 HDAC1Q13547 482 aaPredicted RBP23.45■■□□□ 1.34
EWSR1-207ENST00000406548 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
EWSR1-207ENST00000406548 BRPF3Q9ULD4 1205 aa23.44■■□□□ 1.34
EWSR1-207ENST00000406548 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
EWSR1-207ENST00000406548 DIAPH1O60610 1272 aaKnown RBP23.44■■□□□ 1.34
EWSR1-207ENST00000406548 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
EWSR1-207ENST00000406548 ITPRIPQ8IWB1 547 aa23.44■■□□□ 1.34
EWSR1-207ENST00000406548 SLKQ9H2G2 1235 aaPredicted RBP23.44■■□□□ 1.34
EWSR1-207ENST00000406548 RIPK4P57078 832 aa23.43■■□□□ 1.34
EWSR1-207ENST00000406548 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
EWSR1-207ENST00000406548 RTN4Q9NQC3 1192 aaKnown RBP23.43■■□□□ 1.34
EWSR1-207ENST00000406548 PNNQ9H307 717 aaKnown RBP23.42■■□□□ 1.34
EWSR1-207ENST00000406548 LRRC7Q96NW7 1537 aa23.42■■□□□ 1.34
EWSR1-207ENST00000406548 ANTXR1Q9H6X2 564 aa23.41■■□□□ 1.34
EWSR1-207ENST00000406548 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
EWSR1-207ENST00000406548 TBC1D2Q9BYX2 928 aa23.41■■□□□ 1.34
EWSR1-207ENST00000406548 KIF16BQ96L93 1317 aa23.4■■□□□ 1.34
EWSR1-207ENST00000406548 CDK19Q9BWU1 502 aa23.39■■□□□ 1.34
EWSR1-207ENST00000406548 TSPOAP1O95153 1857 aa23.38■■□□□ 1.33
EWSR1-207ENST00000406548 TMEM57Q8N5G2 664 aa23.38■■□□□ 1.33
EWSR1-207ENST00000406548 SMC5Q8IY18 1101 aa23.37■■□□□ 1.33
EWSR1-207ENST00000406548 IPO8O15397 1037 aaKnown RBP23.36■■□□□ 1.33
EWSR1-207ENST00000406548 CABP1Q9NZU7 370 aa23.36■■□□□ 1.33
EWSR1-207ENST00000406548 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
EWSR1-207ENST00000406548 FCHSD2O94868 740 aa23.36■■□□□ 1.33
EWSR1-207ENST00000406548 ZBTB40Q9NUA8 1239 aa23.36■■□□□ 1.33
EWSR1-207ENST00000406548 ALDH1L2Q3SY69 923 aa23.35■■□□□ 1.33
EWSR1-207ENST00000406548 ATP7BP35670 1465 aa23.35■■□□□ 1.33
EWSR1-207ENST00000406548 DLC1Q96QB1 1528 aa23.34■■□□□ 1.33
EWSR1-207ENST00000406548 FBXO31Q5XUX0 539 aaPredicted RBP23.34■■□□□ 1.33
EWSR1-207ENST00000406548 KIF13AQ9H1H9 1805 aa23.34■■□□□ 1.33
EWSR1-207ENST00000406548 C22orf23Q9BZE7 217 aa23.33■■□□□ 1.33
EWSR1-207ENST00000406548 RSPH6AQ9H0K4 717 aa23.33■■□□□ 1.33
EWSR1-207ENST00000406548 MFAP1P55081 439 aaKnown RBP23.32■■□□□ 1.32
EWSR1-207ENST00000406548 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
EWSR1-207ENST00000406548 PRKAR2BP31323 418 aa23.31■■□□□ 1.32
EWSR1-207ENST00000406548 SETD1AO15047 1707 aaKnown RBP23.3■■□□□ 1.32
EWSR1-207ENST00000406548 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
EWSR1-207ENST00000406548 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
EWSR1-207ENST00000406548 STAG3Q9UJ98 1225 aa23.29■■□□□ 1.32
EWSR1-207ENST00000406548 MAP2P11137 1827 aaKnown RBP23.29■■□□□ 1.32
EWSR1-207ENST00000406548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.29■■□□□ 1.32
EWSR1-207ENST00000406548 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
EWSR1-207ENST00000406548 REREQ9P2R6 1566 aa23.27■■□□□ 1.32
EWSR1-207ENST00000406548 NUCB1Q02818 461 aa23.27■■□□□ 1.32
EWSR1-207ENST00000406548 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
EWSR1-207ENST00000406548 A2ML1A8K2U0 1454 aa23.25■■□□□ 1.31
EWSR1-207ENST00000406548 FBLN1P23142 703 aa23.24■■□□□ 1.31
EWSR1-207ENST00000406548 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
EWSR1-207ENST00000406548 PTCH1Q13635 1447 aa23.24■■□□□ 1.31
EWSR1-207ENST00000406548 CALD1Q05682 793 aaKnown RBP23.23■■□□□ 1.31
EWSR1-207ENST00000406548 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
EWSR1-207ENST00000406548 AGLP35573 1532 aa23.23■■□□□ 1.31
EWSR1-207ENST00000406548 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
EWSR1-207ENST00000406548 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
EWSR1-207ENST00000406548 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
EWSR1-207ENST00000406548 EDC4Q6P2E9 1401 aaKnown RBP23.22■■□□□ 1.31
EWSR1-207ENST00000406548 RIMS2Q9UQ26 1411 aa23.22■■□□□ 1.31
EWSR1-207ENST00000406548 HMOX1P09601 288 aa23.22■■□□□ 1.31
EWSR1-207ENST00000406548 CHD1LQ86WJ1 897 aa23.22■■□□□ 1.31
EWSR1-207ENST00000406548 LNPKQ9C0E8 428 aa23.22■■□□□ 1.31
EWSR1-207ENST00000406548 SPATA31D1Q6ZQQ2 1576 aa23.22■■□□□ 1.31
EWSR1-207ENST00000406548 MRPL50Q8N5N7 158 aaKnown RBP23.21■■□□□ 1.31
EWSR1-207ENST00000406548 CHMP5Q9NZZ3 219 aa23.21■■□□□ 1.31
EWSR1-207ENST00000406548 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
EWSR1-207ENST00000406548 VAMP4O75379 141 aa23.2■■□□□ 1.3
EWSR1-207ENST00000406548 ARHGAP45Q92619 1136 aa23.2■■□□□ 1.3
EWSR1-207ENST00000406548 CHMP4BQ9H444 224 aaKnown RBP23.2■■□□□ 1.3
EWSR1-207ENST00000406548 HSCBQ8IWL3 235 aa23.2■■□□□ 1.3
EWSR1-207ENST00000406548 THUMPD2Q9BTF0 503 aaKnown RBP23.2■■□□□ 1.3
EWSR1-207ENST00000406548 IFT57Q9NWB7 429 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms