RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ILDR2Q71H61 639 aa29.2■■■□□ 2.26
PDGFA-204ENST00000405692 ALS2Q96Q42 1657 aa29.19■■■□□ 2.26
PDGFA-204ENST00000405692 TMF1P82094 1093 aa29.19■■■□□ 2.26
PDGFA-204ENST00000405692 PLEKHG5O94827 1062 aa29.16■■■□□ 2.26
PDGFA-204ENST00000405692 CDCA8Q53HL2 280 aa29.16■■■□□ 2.26
PDGFA-204ENST00000405692 POTEAQ6S8J7 498 aa29.16■■■□□ 2.26
PDGFA-204ENST00000405692 CABLES1Q8TDN4 633 aa29.16■■■□□ 2.26
PDGFA-204ENST00000405692 USP6P35125 1406 aa29.16■■■□□ 2.26
PDGFA-204ENST00000405692 ABTB2Q8N961 1025 aa29.15■■■□□ 2.26
PDGFA-204ENST00000405692 TMC1Q8TDI8 760 aa29.15■■■□□ 2.26
PDGFA-204ENST00000405692 FNBP4Q8N3X1 1017 aaPredicted RBP29.14■■■□□ 2.26
PDGFA-204ENST00000405692 EIF4G2P78344 907 aaKnown RBP eCLIP29.13■■■□□ 2.25
PDGFA-204ENST00000405692 NINLQ9Y2I6 1382 aa29.13■■■□□ 2.25
PDGFA-204ENST00000405692 HDGFL2Q7Z4V5 671 aaPredicted RBP29.12■■■□□ 2.25
PDGFA-204ENST00000405692 USP21Q9UK80 565 aa29.12■■■□□ 2.25
PDGFA-204ENST00000405692 MARF1Q9Y4F3 1742 aaKnown RBP29.11■■■□□ 2.25
PDGFA-204ENST00000405692 NLRP13Q86W25 1043 aa29.11■■■□□ 2.25
PDGFA-204ENST00000405692 TERF2IPQ9NYB0 399 aa29.11■■■□□ 2.25
PDGFA-204ENST00000405692 CPSF1Q10570 1443 aaKnown RBP29.11■■■□□ 2.25
PDGFA-204ENST00000405692 KTN1Q86UP2 1357 aaKnown RBP29.1■■■□□ 2.25
PDGFA-204ENST00000405692 NUTM2GQ5VZR2 741 aa29.08■■■□□ 2.25
PDGFA-204ENST00000405692 SLC12A5Q9H2X9 1139 aa29.08■■■□□ 2.25
PDGFA-204ENST00000405692 ABCA3Q99758 1704 aa29.08■■■□□ 2.25
PDGFA-204ENST00000405692 SSH2Q76I76 1423 aa29.07■■■□□ 2.24
PDGFA-204ENST00000405692 TTC21AQ8NDW8 1320 aa29.07■■■□□ 2.24
PDGFA-204ENST00000405692 QTRT2Q9H974 415 aaKnown RBP29.07■■■□□ 2.24
PDGFA-204ENST00000405692 RXRBP28702 533 aa29.06■■■□□ 2.24
PDGFA-204ENST00000405692 TRPC5Q9UL62 973 aaPredicted RBP29.06■■■□□ 2.24
PDGFA-204ENST00000405692 AKAP12Q02952 1782 aa29.06■■■□□ 2.24
PDGFA-204ENST00000405692 TTC21BQ7Z4L5 1316 aa29.05■■■□□ 2.24
PDGFA-204ENST00000405692 NLRP6P59044 892 aa29.03■■■□□ 2.24
PDGFA-204ENST00000405692 USP19O94966 1318 aa29.02■■■□□ 2.24
PDGFA-204ENST00000405692 SLIT2O94813 1529 aa29.01■■■□□ 2.23
PDGFA-204ENST00000405692 HSPA5P11021 654 aaKnown RBP29.01■■■□□ 2.23
PDGFA-204ENST00000405692 RBM6P78332 1123 aaKnown RBP29.01■■■□□ 2.23
PDGFA-204ENST00000405692 UNC5CLQ8IV45 518 aa29.01■■■□□ 2.23
PDGFA-204ENST00000405692 CRYBG1Q9Y4K1 1723 aa29■■■□□ 2.23
PDGFA-204ENST00000405692 BCL9LQ86UU0 1499 aa29■■■□□ 2.23
PDGFA-204ENST00000405692 CD163L1Q9NR16 1453 aa29■■■□□ 2.23
PDGFA-204ENST00000405692 FAM83GA6ND36 823 aa29■■■□□ 2.23
PDGFA-204ENST00000405692 PRDM11Q9NQV5 511 aa29■■■□□ 2.23
PDGFA-204ENST00000405692 MON2Q7Z3U7 1717 aa28.98■■■□□ 2.23
PDGFA-204ENST00000405692 EDC4Q6P2E9 1401 aaKnown RBP28.98■■■□□ 2.23
PDGFA-204ENST00000405692 A0A1W2PP64 1363 aa28.98■■■□□ 2.23
PDGFA-204ENST00000405692 PHRF1Q9P1Y6 1649 aaKnown RBP28.98■■■□□ 2.23
PDGFA-204ENST00000405692 ATRNO75882 1429 aa28.97■■■□□ 2.23
PDGFA-204ENST00000405692 GCP02774 474 aa28.97■■■□□ 2.23
PDGFA-204ENST00000405692 SOCS7O14512 581 aa28.96■■■□□ 2.23
PDGFA-204ENST00000405692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.96■■■□□ 2.23
PDGFA-204ENST00000405692 NRKQ7Z2Y5 1582 aa28.96■■■□□ 2.23
PDGFA-204ENST00000405692 COL14A1Q05707 1796 aaKnown RBP28.96■■■□□ 2.23
PDGFA-204ENST00000405692 ZC3H6P61129 1189 aaKnown RBP28.95■■■□□ 2.22
PDGFA-204ENST00000405692 ANKRD36BQ8N2N9 1353 aa28.95■■■□□ 2.22
PDGFA-204ENST00000405692 KIAA0232Q92628 1395 aa28.95■■■□□ 2.22
PDGFA-204ENST00000405692 CDK12Q9NYV4 1490 aaPredicted RBP28.94■■■□□ 2.22
PDGFA-204ENST00000405692 KCNH5Q8NCM2 988 aa28.94■■■□□ 2.22
PDGFA-204ENST00000405692 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.94■■■□□ 2.22
PDGFA-204ENST00000405692 NWD2Q9ULI1 1742 aa28.94■■■□□ 2.22
PDGFA-204ENST00000405692 PIK3C2AO00443 1686 aa28.93■■■□□ 2.22
PDGFA-204ENST00000405692 CPDO75976 1380 aa28.93■■■□□ 2.22
PDGFA-204ENST00000405692 BTG4Q9NY30 223 aa28.93■■■□□ 2.22
PDGFA-204ENST00000405692 PLCH1Q4KWH8 1693 aa28.92■■■□□ 2.22
PDGFA-204ENST00000405692 GJD4Q96KN9 370 aaPredicted RBP28.91■■■□□ 2.22
PDGFA-204ENST00000405692 SLIT3O75094 1523 aa28.9■■■□□ 2.22
PDGFA-204ENST00000405692 VPS72Q15906 364 aa28.9■■■□□ 2.22
PDGFA-204ENST00000405692 USP31Q70CQ4 1352 aa28.89■■■□□ 2.22
PDGFA-204ENST00000405692 CHRNA2Q15822 529 aa28.88■■■□□ 2.21
PDGFA-204ENST00000405692 NME9Q86XW9 330 aa28.87■■■□□ 2.21
PDGFA-204ENST00000405692 POLR3GLQ9BT43 218 aa28.87■■■□□ 2.21
PDGFA-204ENST00000405692 CCDC9Q9Y3X0 531 aaKnown RBP28.87■■■□□ 2.21
PDGFA-204ENST00000405692 ZBTB7CA1YPR0 619 aa28.82■■■□□ 2.2
PDGFA-204ENST00000405692 EVA1CP58658 441 aa28.82■■■□□ 2.2
PDGFA-204ENST00000405692 NRAPQ86VF7 1730 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 USP54Q70EL1 1684 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 RGS12O14924 1447 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 AATKQ6ZMQ8 1374 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 SOX12O15370 315 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 COG3Q96JB2 828 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 ZRANB1Q9UGI0 708 aa28.8■■■□□ 2.2
PDGFA-204ENST00000405692 STRN4Q9NRL3 753 aa28.79■■■□□ 2.2
PDGFA-204ENST00000405692 MYOM1P52179 1685 aa28.79■■■□□ 2.2
PDGFA-204ENST00000405692 ARHGEF25Q86VW2 580 aa28.78■■■□□ 2.2
PDGFA-204ENST00000405692 OVOS2A0A0J9YW53 1432 aa28.77■■■□□ 2.2
PDGFA-204ENST00000405692 OVOS2Q6IE36 1432 aa28.77■■■□□ 2.2
PDGFA-204ENST00000405692 GLI3P10071 1580 aa28.75■■■□□ 2.19
PDGFA-204ENST00000405692 LMO7Q8WWI1 1683 aa28.75■■■□□ 2.19
PDGFA-204ENST00000405692 NFAT5O94916 1531 aa28.74■■■□□ 2.19
PDGFA-204ENST00000405692 SPATA31A5Q5VU36 1347 aa28.74■■■□□ 2.19
PDGFA-204ENST00000405692 SPATA31A7Q8IWB4 1347 aa28.74■■■□□ 2.19
PDGFA-204ENST00000405692 CAMTA1Q9Y6Y1 1673 aa28.74■■■□□ 2.19
PDGFA-204ENST00000405692 FYB1O15117 783 aa28.73■■■□□ 2.19
PDGFA-204ENST00000405692 NSD3Q9BZ95 1437 aa28.72■■■□□ 2.19
PDGFA-204ENST00000405692 ONECUT3O60422 494 aaPredicted RBP28.72■■■□□ 2.19
PDGFA-204ENST00000405692 CARD14Q9BXL6 1004 aa28.72■■■□□ 2.19
PDGFA-204ENST00000405692 C11orf95C9JLR9 678 aaPredicted RBP28.71■■■□□ 2.19
PDGFA-204ENST00000405692 ABCC6O95255 1503 aa28.7■■■□□ 2.19
PDGFA-204ENST00000405692 COL5A2P05997 1499 aaPredicted RBP28.7■■■□□ 2.18
PDGFA-204ENST00000405692 CGNL1Q0VF96 1302 aa28.69■■■□□ 2.18
PDGFA-204ENST00000405692 SPATA31A1Q5TZJ5 1347 aa28.69■■■□□ 2.18
PDGFA-204ENST00000405692 GGNBP2Q9H3C7 697 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms