RNA–Protein interactions for RNA: ENST00000403974.6

PMS2CL-202, Transcript of PMS2 C-terminal like pseudogene, humanhuman

BASIC

Gene PMS2CL, Length 1,529 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-202ENST00000403974 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
PMS2CL-202ENST00000403974 ARHGEF10O15013 1369 aa17.16■□□□□ 0.34
PMS2CL-202ENST00000403974 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 USP6P35125 1406 aa17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
PMS2CL-202ENST00000403974 CCDC7Q96M83 1385 aa17.14■□□□□ 0.33
PMS2CL-202ENST00000403974 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
PMS2CL-202ENST00000403974 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
PMS2CL-202ENST00000403974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.33
PMS2CL-202ENST00000403974 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
PMS2CL-202ENST00000403974 AKAP12Q02952 1782 aa17.13■□□□□ 0.33
PMS2CL-202ENST00000403974 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
PMS2CL-202ENST00000403974 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
PMS2CL-202ENST00000403974 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
PMS2CL-202ENST00000403974 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
PMS2CL-202ENST00000403974 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
PMS2CL-202ENST00000403974 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
PMS2CL-202ENST00000403974 CD163L1Q9NR16 1453 aa17.11■□□□□ 0.33
PMS2CL-202ENST00000403974 LRP6O75581 1613 aa17.11■□□□□ 0.33
PMS2CL-202ENST00000403974 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
PMS2CL-202ENST00000403974 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
PMS2CL-202ENST00000403974 NLRP6P59044 892 aa17.1■□□□□ 0.33
PMS2CL-202ENST00000403974 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
PMS2CL-202ENST00000403974 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
PMS2CL-202ENST00000403974 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
PMS2CL-202ENST00000403974 C8orf37Q96NL8 207 aa17.08■□□□□ 0.32
PMS2CL-202ENST00000403974 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
PMS2CL-202ENST00000403974 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
PMS2CL-202ENST00000403974 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
PMS2CL-202ENST00000403974 NME9Q86XW9 330 aa17.06■□□□□ 0.32
PMS2CL-202ENST00000403974 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
PMS2CL-202ENST00000403974 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
PMS2CL-202ENST00000403974 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
PMS2CL-202ENST00000403974 SOX12O15370 315 aa17.05■□□□□ 0.32
PMS2CL-202ENST00000403974 PANK3Q9H999 370 aa17.05■□□□□ 0.32
PMS2CL-202ENST00000403974 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
PMS2CL-202ENST00000403974 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
PMS2CL-202ENST00000403974 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
PMS2CL-202ENST00000403974 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
PMS2CL-202ENST00000403974 ABCA3Q99758 1704 aa17.02■□□□□ 0.31
PMS2CL-202ENST00000403974 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
PMS2CL-202ENST00000403974 AFF2P51816 1311 aa17.02■□□□□ 0.31
PMS2CL-202ENST00000403974 GCP02774 474 aa17.01■□□□□ 0.31
PMS2CL-202ENST00000403974 USP19O94966 1318 aa17.01■□□□□ 0.31
PMS2CL-202ENST00000403974 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
PMS2CL-202ENST00000403974 FAM83GA6ND36 823 aa17■□□□□ 0.31
PMS2CL-202ENST00000403974 COG3Q96JB2 828 aa17■□□□□ 0.31
PMS2CL-202ENST00000403974 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
PMS2CL-202ENST00000403974 PHRF1Q9P1Y6 1649 aaKnown RBP17■□□□□ 0.31
PMS2CL-202ENST00000403974 MARF1Q9Y4F3 1742 aaKnown RBP16.99■□□□□ 0.31
PMS2CL-202ENST00000403974 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
PMS2CL-202ENST00000403974 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
PMS2CL-202ENST00000403974 USP31Q70CQ4 1352 aa16.99■□□□□ 0.31
PMS2CL-202ENST00000403974 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
PMS2CL-202ENST00000403974 FYB1O15117 783 aa16.98■□□□□ 0.31
PMS2CL-202ENST00000403974 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
PMS2CL-202ENST00000403974 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
PMS2CL-202ENST00000403974 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
PMS2CL-202ENST00000403974 USP21Q9UK80 565 aa16.98■□□□□ 0.31
PMS2CL-202ENST00000403974 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
PMS2CL-202ENST00000403974 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
PMS2CL-202ENST00000403974 SLIT3O75094 1523 aa16.96■□□□□ 0.31
PMS2CL-202ENST00000403974 KIF20BQ96Q89 1820 aa16.96■□□□□ 0.3
PMS2CL-202ENST00000403974 FNBP4Q8N3X1 1017 aaPredicted RBP16.96■□□□□ 0.3
PMS2CL-202ENST00000403974 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
PMS2CL-202ENST00000403974 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
PMS2CL-202ENST00000403974 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
PMS2CL-202ENST00000403974 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
PMS2CL-202ENST00000403974 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
PMS2CL-202ENST00000403974 POTEAQ6S8J7 498 aa16.93■□□□□ 0.3
PMS2CL-202ENST00000403974 UNC5CLQ8IV45 518 aa16.93■□□□□ 0.3
PMS2CL-202ENST00000403974 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
PMS2CL-202ENST00000403974 CPDO75976 1380 aa16.92■□□□□ 0.3
PMS2CL-202ENST00000403974 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
PMS2CL-202ENST00000403974 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
PMS2CL-202ENST00000403974 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
PMS2CL-202ENST00000403974 FBLN1P23142 703 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 EVA1CP58658 441 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 SLIT2O94813 1529 aa16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 TRPC5Q9UL62 973 aaPredicted RBP16.91■□□□□ 0.3
PMS2CL-202ENST00000403974 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
PMS2CL-202ENST00000403974 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
PMS2CL-202ENST00000403974 NFAT5O94916 1531 aa16.9■□□□□ 0.3
PMS2CL-202ENST00000403974 RXRBP28702 533 aa16.88■□□□□ 0.29
PMS2CL-202ENST00000403974 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
PMS2CL-202ENST00000403974 AATKQ6ZMQ8 1374 aa16.88■□□□□ 0.29
PMS2CL-202ENST00000403974 NWD2Q9ULI1 1742 aa16.88■□□□□ 0.29
PMS2CL-202ENST00000403974 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
PMS2CL-202ENST00000403974 AMPHP49418 695 aa16.87■□□□□ 0.29
PMS2CL-202ENST00000403974 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
PMS2CL-202ENST00000403974 CC2D1BQ5T0F9 858 aaKnown RBP16.87■□□□□ 0.29
PMS2CL-202ENST00000403974 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms