RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
VPREB1-202ENST00000403807 CPSF1Q10570 1443 aaKnown RBP19.02■□□□□ 0.64
VPREB1-202ENST00000403807 ABTB2Q8N961 1025 aa19.02■□□□□ 0.64
VPREB1-202ENST00000403807 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
VPREB1-202ENST00000403807 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
VPREB1-202ENST00000403807 USP6P35125 1406 aa19.01■□□□□ 0.63
VPREB1-202ENST00000403807 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
VPREB1-202ENST00000403807 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
VPREB1-202ENST00000403807 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
VPREB1-202ENST00000403807 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
VPREB1-202ENST00000403807 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
VPREB1-202ENST00000403807 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
VPREB1-202ENST00000403807 NLRP13Q86W25 1043 aa18.98■□□□□ 0.63
VPREB1-202ENST00000403807 TTC21AQ8NDW8 1320 aa18.98■□□□□ 0.63
VPREB1-202ENST00000403807 TRPM3Q9HCF6 1732 aaPredicted RBP18.97■□□□□ 0.63
VPREB1-202ENST00000403807 CABLES1Q8TDN4 633 aa18.97■□□□□ 0.63
VPREB1-202ENST00000403807 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
VPREB1-202ENST00000403807 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
VPREB1-202ENST00000403807 A0A1W2PP64 1363 aa18.96■□□□□ 0.63
VPREB1-202ENST00000403807 ANKRD36BQ8N2N9 1353 aa18.96■□□□□ 0.63
VPREB1-202ENST00000403807 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
VPREB1-202ENST00000403807 NLRP6P59044 892 aa18.96■□□□□ 0.63
VPREB1-202ENST00000403807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
VPREB1-202ENST00000403807 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
VPREB1-202ENST00000403807 COL22A1Q8NFW1 1626 aaPredicted RBP18.95■□□□□ 0.62
VPREB1-202ENST00000403807 KIF7Q2M1P5 1343 aa18.94■□□□□ 0.62
VPREB1-202ENST00000403807 LRP6O75581 1613 aa18.93■□□□□ 0.62
VPREB1-202ENST00000403807 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
VPREB1-202ENST00000403807 C8orf37Q96NL8 207 aa18.93■□□□□ 0.62
VPREB1-202ENST00000403807 ALS2Q96Q42 1657 aa18.92■□□□□ 0.62
VPREB1-202ENST00000403807 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
VPREB1-202ENST00000403807 NGLY1Q96IV0 654 aa18.92■□□□□ 0.62
VPREB1-202ENST00000403807 NME9Q86XW9 330 aa18.9■□□□□ 0.62
VPREB1-202ENST00000403807 PANK3Q9H999 370 aa18.9■□□□□ 0.62
VPREB1-202ENST00000403807 GCP02774 474 aa18.89■□□□□ 0.61
VPREB1-202ENST00000403807 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
VPREB1-202ENST00000403807 KCNH5Q8NCM2 988 aa18.88■□□□□ 0.61
VPREB1-202ENST00000403807 USP19O94966 1318 aa18.88■□□□□ 0.61
VPREB1-202ENST00000403807 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
VPREB1-202ENST00000403807 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
VPREB1-202ENST00000403807 POTEAQ6S8J7 498 aa18.87■□□□□ 0.61
VPREB1-202ENST00000403807 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
VPREB1-202ENST00000403807 MON2Q7Z3U7 1717 aa18.87■□□□□ 0.61
VPREB1-202ENST00000403807 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
VPREB1-202ENST00000403807 AFF2P51816 1311 aa18.86■□□□□ 0.61
VPREB1-202ENST00000403807 ZC3H6P61129 1189 aaKnown RBP18.86■□□□□ 0.61
VPREB1-202ENST00000403807 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
VPREB1-202ENST00000403807 COG3Q96JB2 828 aa18.86■□□□□ 0.61
VPREB1-202ENST00000403807 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
VPREB1-202ENST00000403807 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
VPREB1-202ENST00000403807 FYB1O15117 783 aa18.85■□□□□ 0.61
VPREB1-202ENST00000403807 PRDM11Q9NQV5 511 aa18.85■□□□□ 0.61
VPREB1-202ENST00000403807 USP21Q9UK80 565 aa18.84■□□□□ 0.61
VPREB1-202ENST00000403807 NRKQ7Z2Y5 1582 aa18.84■□□□□ 0.61
VPREB1-202ENST00000403807 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.61
VPREB1-202ENST00000403807 MYOM1P52179 1685 aa18.83■□□□□ 0.61
VPREB1-202ENST00000403807 PIK3C2AO00443 1686 aa18.82■□□□□ 0.6
VPREB1-202ENST00000403807 CGNL1Q0VF96 1302 aa18.82■□□□□ 0.6
VPREB1-202ENST00000403807 SOX12O15370 315 aa18.82■□□□□ 0.6
VPREB1-202ENST00000403807 GGNBP2Q9H3C7 697 aa18.82■□□□□ 0.6
VPREB1-202ENST00000403807 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
VPREB1-202ENST00000403807 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
VPREB1-202ENST00000403807 CPDO75976 1380 aa18.81■□□□□ 0.6
VPREB1-202ENST00000403807 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
VPREB1-202ENST00000403807 UNC5CLQ8IV45 518 aa18.8■□□□□ 0.6
VPREB1-202ENST00000403807 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
VPREB1-202ENST00000403807 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
VPREB1-202ENST00000403807 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
VPREB1-202ENST00000403807 SLIT3O75094 1523 aa18.79■□□□□ 0.6
VPREB1-202ENST00000403807 ABCA3Q99758 1704 aa18.78■□□□□ 0.6
VPREB1-202ENST00000403807 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
VPREB1-202ENST00000403807 TRPC5Q9UL62 973 aaPredicted RBP18.78■□□□□ 0.6
VPREB1-202ENST00000403807 PHRF1Q9P1Y6 1649 aaKnown RBP18.78■□□□□ 0.6
VPREB1-202ENST00000403807 CRYBG1Q9Y4K1 1723 aa18.77■□□□□ 0.6
VPREB1-202ENST00000403807 OVOS2A0A0J9YW53 1432 aa18.77■□□□□ 0.6
VPREB1-202ENST00000403807 OVOS2Q6IE36 1432 aa18.77■□□□□ 0.6
VPREB1-202ENST00000403807 SLIT2O94813 1529 aa18.77■□□□□ 0.6
VPREB1-202ENST00000403807 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.59
VPREB1-202ENST00000403807 EVA1CP58658 441 aa18.76■□□□□ 0.59
VPREB1-202ENST00000403807 BCL9LQ86UU0 1499 aa18.76■□□□□ 0.59
VPREB1-202ENST00000403807 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
VPREB1-202ENST00000403807 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
VPREB1-202ENST00000403807 RXRBP28702 533 aa18.74■□□□□ 0.59
VPREB1-202ENST00000403807 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
VPREB1-202ENST00000403807 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
VPREB1-202ENST00000403807 NSD2O96028 1365 aa18.72■□□□□ 0.59
VPREB1-202ENST00000403807 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
VPREB1-202ENST00000403807 VPS72Q15906 364 aa18.72■□□□□ 0.59
VPREB1-202ENST00000403807 STRN4Q9NRL3 753 aa18.72■□□□□ 0.59
VPREB1-202ENST00000403807 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
VPREB1-202ENST00000403807 FBLN1P23142 703 aa18.71■□□□□ 0.59
VPREB1-202ENST00000403807 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
VPREB1-202ENST00000403807 GJD4Q96KN9 370 aaPredicted RBP18.71■□□□□ 0.59
VPREB1-202ENST00000403807 NFAT5O94916 1531 aa18.7■□□□□ 0.58
VPREB1-202ENST00000403807 ATRNO75882 1429 aa18.7■□□□□ 0.58
VPREB1-202ENST00000403807 AMPHP49418 695 aa18.7■□□□□ 0.58
VPREB1-202ENST00000403807 MORC1Q86VD1 984 aa18.7■□□□□ 0.58
VPREB1-202ENST00000403807 AXIN2Q9Y2T1 843 aa18.7■□□□□ 0.58
VPREB1-202ENST00000403807 RRS1Q15050 365 aaKnown RBP18.69■□□□□ 0.58
VPREB1-202ENST00000403807 IP6K1Q92551 441 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms