RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 MYOM1P52179 1685 aa17.74■□□□□ 0.43
NDEL1-203ENST00000402554 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
NDEL1-203ENST00000402554 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
NDEL1-203ENST00000402554 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
NDEL1-203ENST00000402554 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
NDEL1-203ENST00000402554 PSME1Q06323 249 aa17.73■□□□□ 0.43
NDEL1-203ENST00000402554 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
NDEL1-203ENST00000402554 NGDNQ8NEJ9 315 aaKnown RBP17.73■□□□□ 0.43
NDEL1-203ENST00000402554 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
NDEL1-203ENST00000402554 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
NDEL1-203ENST00000402554 HNRNPUQ00839 825 aaKnown RBP eCLIP17.73■□□□□ 0.43
NDEL1-203ENST00000402554 ALS2Q96Q42 1657 aa17.72■□□□□ 0.43
NDEL1-203ENST00000402554 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
NDEL1-203ENST00000402554 ABCA3Q99758 1704 aa17.72■□□□□ 0.43
NDEL1-203ENST00000402554 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
NDEL1-203ENST00000402554 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
NDEL1-203ENST00000402554 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
NDEL1-203ENST00000402554 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
NDEL1-203ENST00000402554 LMOD2Q6P5Q4 547 aa17.71■□□□□ 0.43
NDEL1-203ENST00000402554 ACEP12821 1306 aa17.71■□□□□ 0.43
NDEL1-203ENST00000402554 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
NDEL1-203ENST00000402554 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
NDEL1-203ENST00000402554 SBNO1A3KN83 1393 aa17.69■□□□□ 0.42
NDEL1-203ENST00000402554 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-203ENST00000402554 ADAMTS2O95450 1211 aa17.69■□□□□ 0.42
NDEL1-203ENST00000402554 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-203ENST00000402554 MARF1Q9Y4F3 1742 aaKnown RBP17.68■□□□□ 0.42
NDEL1-203ENST00000402554 NLRP13Q86W25 1043 aa17.68■□□□□ 0.42
NDEL1-203ENST00000402554 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
NDEL1-203ENST00000402554 AKAP12Q02952 1782 aa17.67■□□□□ 0.42
NDEL1-203ENST00000402554 PLEKHG3A1L390 1219 aa17.67■□□□□ 0.42
NDEL1-203ENST00000402554 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
NDEL1-203ENST00000402554 ILDR2Q71H61 639 aa17.67■□□□□ 0.42
NDEL1-203ENST00000402554 CABLES1Q8TDN4 633 aa17.67■□□□□ 0.42
NDEL1-203ENST00000402554 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
NDEL1-203ENST00000402554 CRYBG1Q9Y4K1 1723 aa17.66■□□□□ 0.42
NDEL1-203ENST00000402554 AMER1Q5JTC6 1135 aaPredicted RBP17.65■□□□□ 0.42
NDEL1-203ENST00000402554 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
NDEL1-203ENST00000402554 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
NDEL1-203ENST00000402554 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
NDEL1-203ENST00000402554 ARHGEF10O15013 1369 aa17.64■□□□□ 0.41
NDEL1-203ENST00000402554 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
NDEL1-203ENST00000402554 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
NDEL1-203ENST00000402554 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
NDEL1-203ENST00000402554 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
NDEL1-203ENST00000402554 MON2Q7Z3U7 1717 aa17.62■□□□□ 0.41
NDEL1-203ENST00000402554 AFF2P51816 1311 aa17.62■□□□□ 0.41
NDEL1-203ENST00000402554 USP6P35125 1406 aa17.61■□□□□ 0.41
NDEL1-203ENST00000402554 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
NDEL1-203ENST00000402554 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
NDEL1-203ENST00000402554 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
NDEL1-203ENST00000402554 HAP1P54257 671 aaPredicted RBP17.6■□□□□ 0.41
NDEL1-203ENST00000402554 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
NDEL1-203ENST00000402554 ZBED9Q6R2W3 1325 aa17.6■□□□□ 0.41
NDEL1-203ENST00000402554 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
NDEL1-203ENST00000402554 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
NDEL1-203ENST00000402554 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
NDEL1-203ENST00000402554 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
NDEL1-203ENST00000402554 SSH2Q76I76 1423 aa17.57■□□□□ 0.4
NDEL1-203ENST00000402554 PPP2R1AP30153 589 aa17.56■□□□□ 0.4
NDEL1-203ENST00000402554 NINLQ9Y2I6 1382 aa17.56■□□□□ 0.4
NDEL1-203ENST00000402554 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
NDEL1-203ENST00000402554 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
NDEL1-203ENST00000402554 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
NDEL1-203ENST00000402554 ANKRD36BQ8N2N9 1353 aa17.54■□□□□ 0.4
NDEL1-203ENST00000402554 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
NDEL1-203ENST00000402554 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
NDEL1-203ENST00000402554 USP21Q9UK80 565 aa17.52■□□□□ 0.4
NDEL1-203ENST00000402554 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.39
NDEL1-203ENST00000402554 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
NDEL1-203ENST00000402554 NRAPQ86VF7 1730 aa17.51■□□□□ 0.39
NDEL1-203ENST00000402554 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
NDEL1-203ENST00000402554 SLIT2O94813 1529 aa17.51■□□□□ 0.39
NDEL1-203ENST00000402554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.51■□□□□ 0.393e-9■■■■□ 20
NDEL1-203ENST00000402554 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
NDEL1-203ENST00000402554 USP19O94966 1318 aa17.5■□□□□ 0.39
NDEL1-203ENST00000402554 HDGFL2Q7Z4V5 671 aaPredicted RBP17.5■□□□□ 0.39
NDEL1-203ENST00000402554 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
NDEL1-203ENST00000402554 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
NDEL1-203ENST00000402554 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
NDEL1-203ENST00000402554 INSRP06213 1382 aa17.5■□□□□ 0.39
NDEL1-203ENST00000402554 SLIT3O75094 1523 aa17.49■□□□□ 0.39
NDEL1-203ENST00000402554 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
NDEL1-203ENST00000402554 CGNL1Q0VF96 1302 aa17.49■□□□□ 0.39
NDEL1-203ENST00000402554 FAM83GA6ND36 823 aa17.49■□□□□ 0.39
NDEL1-203ENST00000402554 NLRP6P59044 892 aa17.49■□□□□ 0.39
NDEL1-203ENST00000402554 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
NDEL1-203ENST00000402554 NME9Q86XW9 330 aa17.48■□□□□ 0.39
NDEL1-203ENST00000402554 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
NDEL1-203ENST00000402554 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
NDEL1-203ENST00000402554 EDC4Q6P2E9 1401 aaKnown RBP17.48■□□□□ 0.39
NDEL1-203ENST00000402554 CHRNA2Q15822 529 aa17.48■□□□□ 0.39
NDEL1-203ENST00000402554 ATRNO75882 1429 aa17.47■□□□□ 0.39
NDEL1-203ENST00000402554 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
NDEL1-203ENST00000402554 SOX12O15370 315 aa17.47■□□□□ 0.39
NDEL1-203ENST00000402554 MORC1Q86VD1 984 aa17.47■□□□□ 0.39
NDEL1-203ENST00000402554 NSD2O96028 1365 aa17.47■□□□□ 0.39
NDEL1-203ENST00000402554 USP54Q70EL1 1684 aa17.46■□□□□ 0.39
NDEL1-203ENST00000402554 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
NDEL1-203ENST00000402554 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms