RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 ANKRD36BQ8N2N9 1353 aa36.98■■■■□ 3.51
CGREF1-204ENST00000402550 BRD4O60885 1362 aaPredicted RBP36.97■■■■□ 3.51
CGREF1-204ENST00000402550 SSH2Q76I76 1423 aa36.97■■■■□ 3.51
CGREF1-204ENST00000402550 DDX10Q13206 875 aaKnown RBP36.96■■■■□ 3.51
CGREF1-204ENST00000402550 JCADQ9P266 1359 aa36.96■■■■□ 3.51
CGREF1-204ENST00000402550 TNS3Q68CZ2 1445 aa36.95■■■■□ 3.51
CGREF1-204ENST00000402550 LMOD2Q6P5Q4 547 aa36.95■■■■□ 3.51
CGREF1-204ENST00000402550 MON2Q7Z3U7 1717 aa36.93■■■■□ 3.5
CGREF1-204ENST00000402550 TTC21BQ7Z4L5 1316 aa36.92■■■■□ 3.5
CGREF1-204ENST00000402550 PNPLA6Q8IY17 1366 aa36.91■■■■□ 3.5
CGREF1-204ENST00000402550 ABTB2Q8N961 1025 aa36.9■■■■□ 3.5
CGREF1-204ENST00000402550 CARD14Q9BXL6 1004 aa36.9■■■■□ 3.5
CGREF1-204ENST00000402550 PANK3Q9H999 370 aa36.9■■■■□ 3.5
CGREF1-204ENST00000402550 ALS2Q96Q42 1657 aa36.89■■■■□ 3.5
CGREF1-204ENST00000402550 EDC4Q6P2E9 1401 aaKnown RBP36.89■■■■□ 3.5
CGREF1-204ENST00000402550 ARHGEF10O15013 1369 aa36.89■■■■□ 3.5
CGREF1-204ENST00000402550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.88■■■■□ 3.49
CGREF1-204ENST00000402550 SHPRHQ149N8 1683 aa36.87■■■■□ 3.49
CGREF1-204ENST00000402550 NRKQ7Z2Y5 1582 aa36.86■■■■□ 3.49
CGREF1-204ENST00000402550 TTC21AQ8NDW8 1320 aa36.86■■■■□ 3.49
CGREF1-204ENST00000402550 NUTM2GQ5VZR2 741 aa36.84■■■■□ 3.49
CGREF1-204ENST00000402550 SPATA31A6Q5VVP1 1343 aa36.81■■■■□ 3.48
CGREF1-204ENST00000402550 COL22A1Q8NFW1 1626 aaPredicted RBP36.8■■■■□ 3.48
CGREF1-204ENST00000402550 NLRP6P59044 892 aa36.79■■■■□ 3.48
CGREF1-204ENST00000402550 NME9Q86XW9 330 aa36.79■■■■□ 3.48
CGREF1-204ENST00000402550 CABLES1Q8TDN4 633 aa36.79■■■■□ 3.48
CGREF1-204ENST00000402550 PLEKHG5O94827 1062 aa36.78■■■■□ 3.48
CGREF1-204ENST00000402550 NLRP13Q86W25 1043 aa36.78■■■■□ 3.48
CGREF1-204ENST00000402550 NSD3Q9BZ95 1437 aa36.77■■■■□ 3.48
CGREF1-204ENST00000402550 PIK3C2AO00443 1686 aa36.77■■■■□ 3.48
CGREF1-204ENST00000402550 KNSTRNQ9Y448 316 aa36.76■■■■□ 3.48
CGREF1-204ENST00000402550 ZRANB1Q9UGI0 708 aa36.75■■■■□ 3.47
CGREF1-204ENST00000402550 NUTM2BA6NNL0 878 aaPredicted RBP36.74■■■■□ 3.47
CGREF1-204ENST00000402550 NUTM2EB1AL46 878 aaPredicted RBP36.74■■■■□ 3.47
CGREF1-204ENST00000402550 FYB1O15117 783 aa36.74■■■■□ 3.47
CGREF1-204ENST00000402550 NUTM2AQ8IVF1 878 aaPredicted RBP36.74■■■■□ 3.47
CGREF1-204ENST00000402550 PER1O15534 1290 aaPredicted RBP36.72■■■■□ 3.47
CGREF1-204ENST00000402550 USP31Q70CQ4 1352 aa36.71■■■■□ 3.47
CGREF1-204ENST00000402550 MED1Q15648 1581 aaPredicted RBP36.7■■■■□ 3.47
CGREF1-204ENST00000402550 USP19O94966 1318 aa36.69■■■■□ 3.46
CGREF1-204ENST00000402550 CGNL1Q0VF96 1302 aa36.69■■■■□ 3.46
CGREF1-204ENST00000402550 HAP1P54257 671 aaPredicted RBP36.68■■■■□ 3.46
CGREF1-204ENST00000402550 GGNBP2Q9H3C7 697 aa36.67■■■■□ 3.46
CGREF1-204ENST00000402550 CRYBG1Q9Y4K1 1723 aa36.66■■■■□ 3.46
CGREF1-204ENST00000402550 LRP6O75581 1613 aa36.66■■■■□ 3.46
CGREF1-204ENST00000402550 DIEXFQ68CQ4 756 aaKnown RBP36.66■■■■□ 3.46
CGREF1-204ENST00000402550 GCP02774 474 aa36.65■■■■□ 3.46
CGREF1-204ENST00000402550 ADAMTS2O95450 1211 aa36.64■■■■□ 3.46
CGREF1-204ENST00000402550 COG3Q96JB2 828 aa36.64■■■■□ 3.46
CGREF1-204ENST00000402550 MARF1Q9Y4F3 1742 aaKnown RBP36.64■■■■□ 3.46
CGREF1-204ENST00000402550 KIF20BQ96Q89 1820 aa36.63■■■■□ 3.45
CGREF1-204ENST00000402550 ABCA3Q99758 1704 aa36.63■■■■□ 3.45
CGREF1-204ENST00000402550 OVOS2A0A0J9YW53 1432 aa36.62■■■■□ 3.45
CGREF1-204ENST00000402550 OVOS2Q6IE36 1432 aa36.62■■■■□ 3.45
CGREF1-204ENST00000402550 USP54Q70EL1 1684 aa36.6■■■■□ 3.45
CGREF1-204ENST00000402550 PHRF1Q9P1Y6 1649 aaKnown RBP36.6■■■■□ 3.45
CGREF1-204ENST00000402550 AMER1Q5JTC6 1135 aaPredicted RBP36.59■■■■□ 3.45
CGREF1-204ENST00000402550 SLIT3O75094 1523 aa36.59■■■■□ 3.45
CGREF1-204ENST00000402550 KCNH5Q8NCM2 988 aa36.58■■■■□ 3.45
CGREF1-204ENST00000402550 ZC3H6P61129 1189 aaKnown RBP36.57■■■■□ 3.44
CGREF1-204ENST00000402550 NSD2O96028 1365 aa36.56■■■■□ 3.44
CGREF1-204ENST00000402550 SOX12O15370 315 aa36.56■■■■□ 3.44
CGREF1-204ENST00000402550 MEX3CQ5U5Q3 659 aaKnown RBP36.56■■■■□ 3.44
CGREF1-204ENST00000402550 NPC1L1Q9UHC9 1359 aa36.56■■■■□ 3.44
CGREF1-204ENST00000402550 CC2D1BQ5T0F9 858 aaKnown RBP36.53■■■■□ 3.44
CGREF1-204ENST00000402550 ANKRD26Q9UPS8 1709 aa36.52■■■■□ 3.44
CGREF1-204ENST00000402550 CNGB1Q14028 1251 aaPredicted RBP36.52■■■■□ 3.44
CGREF1-204ENST00000402550 KIAA0232Q92628 1395 aa36.51■■■■□ 3.44
CGREF1-204ENST00000402550 FAM83GA6ND36 823 aa36.51■■■■□ 3.44
CGREF1-204ENST00000402550 C8orf37Q96NL8 207 aa36.51■■■■□ 3.44
CGREF1-204ENST00000402550 ANP32CO43423 234 aa36.49■■■■□ 3.43
CGREF1-204ENST00000402550 FBLN1P23142 703 aa36.49■■■■□ 3.43
CGREF1-204ENST00000402550 NGLY1Q96IV0 654 aa36.49■■■■□ 3.43
CGREF1-204ENST00000402550 CPDO75976 1380 aa36.49■■■■□ 3.43
CGREF1-204ENST00000402550 PRDM11Q9NQV5 511 aa36.49■■■■□ 3.43
CGREF1-204ENST00000402550 NFAT5O94916 1531 aa36.48■■■■□ 3.43
CGREF1-204ENST00000402550 ARHGEF25Q86VW2 580 aa36.47■■■■□ 3.43
CGREF1-204ENST00000402550 CHRNA2Q15822 529 aa36.44■■■■□ 3.42
CGREF1-204ENST00000402550 MORC1Q86VD1 984 aa36.44■■■■□ 3.42
CGREF1-204ENST00000402550 FNBP4Q8N3X1 1017 aaPredicted RBP36.43■■■■□ 3.42
CGREF1-204ENST00000402550 ZBTB7CA1YPR0 619 aa36.41■■■■□ 3.42
CGREF1-204ENST00000402550 TNNT2P45379 298 aaPredicted RBP36.4■■■■□ 3.42
CGREF1-204ENST00000402550 RALBP1Q15311 655 aa36.4■■■■□ 3.42
CGREF1-204ENST00000402550 PRKRIP1Q9H875 184 aaPredicted RBP36.39■■■■□ 3.42
CGREF1-204ENST00000402550 AFF2P51816 1311 aa36.39■■■■□ 3.42
CGREF1-204ENST00000402550 RRS1Q15050 365 aaKnown RBP36.38■■■■□ 3.41
CGREF1-204ENST00000402550 COL14A1Q05707 1796 aaKnown RBP36.38■■■■□ 3.41
CGREF1-204ENST00000402550 BTG4Q9NY30 223 aa36.37■■■■□ 3.41
CGREF1-204ENST00000402550 AATKQ6ZMQ8 1374 aa36.37■■■■□ 3.41
CGREF1-204ENST00000402550 PARD3Q8TEW0 1356 aa36.37■■■■□ 3.41
CGREF1-204ENST00000402550 SLIT2O94813 1529 aa36.37■■■■□ 3.41
CGREF1-204ENST00000402550 MAP3K19Q56UN5 1328 aa36.36■■■■□ 3.41
CGREF1-204ENST00000402550 LTN1O94822 1766 aa36.35■■■■□ 3.41
CGREF1-204ENST00000402550 AXIN2Q9Y2T1 843 aa36.35■■■■□ 3.41
CGREF1-204ENST00000402550 USP21Q9UK80 565 aa36.34■■■■□ 3.41
CGREF1-204ENST00000402550 PHF23Q9BUL5 403 aaPredicted RBP36.33■■■■□ 3.41
CGREF1-204ENST00000402550 COL18A1P39060 1754 aa36.33■■■■□ 3.41
CGREF1-204ENST00000402550 BCL9LQ86UU0 1499 aa36.32■■■■□ 3.41
CGREF1-204ENST00000402550 RGS17Q9UGC6 210 aaPredicted RBP36.32■■■■□ 3.41
CGREF1-204ENST00000402550 POLKQ9UBT6 870 aa36.32■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms