RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 NRKQ7Z2Y5 1582 aa24.19■■□□□ 1.46
HDAC11-202ENST00000402259 HDGFL2Q7Z4V5 671 aaPredicted RBP24.18■■□□□ 1.46
HDAC11-202ENST00000402259 KTN1Q86UP2 1357 aaKnown RBP24.17■■□□□ 1.46
HDAC11-202ENST00000402259 ANKRD36BQ8N2N9 1353 aa24.17■■□□□ 1.46
HDAC11-202ENST00000402259 SPATA31A6Q5VVP1 1343 aa24.17■■□□□ 1.46
HDAC11-202ENST00000402259 C11orf95C9JLR9 678 aaPredicted RBP24.17■■□□□ 1.46
HDAC11-202ENST00000402259 A0A1W2PP64 1363 aa24.16■■□□□ 1.46
HDAC11-202ENST00000402259 KIF7Q2M1P5 1343 aa24.14■■□□□ 1.46
HDAC11-202ENST00000402259 MED1Q15648 1581 aaPredicted RBP24.14■■□□□ 1.45
HDAC11-202ENST00000402259 EDC4Q6P2E9 1401 aaKnown RBP24.14■■□□□ 1.45
HDAC11-202ENST00000402259 TTC21AQ8NDW8 1320 aa24.13■■□□□ 1.45
HDAC11-202ENST00000402259 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
HDAC11-202ENST00000402259 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
HDAC11-202ENST00000402259 TTC21BQ7Z4L5 1316 aa24.1■■□□□ 1.45
HDAC11-202ENST00000402259 PIK3C2AO00443 1686 aa24.09■■□□□ 1.45
HDAC11-202ENST00000402259 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
HDAC11-202ENST00000402259 ABCA3Q99758 1704 aa24.09■■□□□ 1.45
HDAC11-202ENST00000402259 CRYBG1Q9Y4K1 1723 aa24.09■■□□□ 1.45
HDAC11-202ENST00000402259 USP54Q70EL1 1684 aa24.08■■□□□ 1.44
HDAC11-202ENST00000402259 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.44
HDAC11-202ENST00000402259 LMOD2Q6P5Q4 547 aa24.07■■□□□ 1.44
HDAC11-202ENST00000402259 ABTB2Q8N961 1025 aa24.07■■□□□ 1.44
HDAC11-202ENST00000402259 LRP6O75581 1613 aa24.05■■□□□ 1.44
HDAC11-202ENST00000402259 NLRP13Q86W25 1043 aa24.04■■□□□ 1.44
HDAC11-202ENST00000402259 USP31Q70CQ4 1352 aa24.03■■□□□ 1.44
HDAC11-202ENST00000402259 PHRF1Q9P1Y6 1649 aaKnown RBP24.03■■□□□ 1.44
HDAC11-202ENST00000402259 USP19O94966 1318 aa24.03■■□□□ 1.44
HDAC11-202ENST00000402259 MARF1Q9Y4F3 1742 aaKnown RBP24.02■■□□□ 1.44
HDAC11-202ENST00000402259 CARD14Q9BXL6 1004 aa24.01■■□□□ 1.43
HDAC11-202ENST00000402259 NSD3Q9BZ95 1437 aa24.01■■□□□ 1.43
HDAC11-202ENST00000402259 SLIT3O75094 1523 aa24■■□□□ 1.43
HDAC11-202ENST00000402259 NLRP6P59044 892 aa24■■□□□ 1.43
HDAC11-202ENST00000402259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24■■□□□ 1.43
HDAC11-202ENST00000402259 KIF20BQ96Q89 1820 aa23.99■■□□□ 1.43
HDAC11-202ENST00000402259 NUTM2BA6NNL0 878 aaPredicted RBP23.99■■□□□ 1.43
HDAC11-202ENST00000402259 NUTM2EB1AL46 878 aaPredicted RBP23.99■■□□□ 1.43
HDAC11-202ENST00000402259 NUTM2AQ8IVF1 878 aaPredicted RBP23.99■■□□□ 1.43
HDAC11-202ENST00000402259 PANK3Q9H999 370 aa23.99■■□□□ 1.43
HDAC11-202ENST00000402259 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
HDAC11-202ENST00000402259 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
HDAC11-202ENST00000402259 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
HDAC11-202ENST00000402259 NME9Q86XW9 330 aa23.97■■□□□ 1.43
HDAC11-202ENST00000402259 CABLES1Q8TDN4 633 aa23.97■■□□□ 1.43
HDAC11-202ENST00000402259 HAP1P54257 671 aaPredicted RBP23.96■■□□□ 1.43
HDAC11-202ENST00000402259 CGNL1Q0VF96 1302 aa23.94■■□□□ 1.42
HDAC11-202ENST00000402259 FYB1O15117 783 aa23.94■■□□□ 1.42
HDAC11-202ENST00000402259 GCP02774 474 aa23.93■■□□□ 1.42
HDAC11-202ENST00000402259 MEX3CQ5U5Q3 659 aaKnown RBP23.93■■□□□ 1.42
HDAC11-202ENST00000402259 KCNH5Q8NCM2 988 aa23.93■■□□□ 1.42
HDAC11-202ENST00000402259 CPDO75976 1380 aa23.92■■□□□ 1.42
HDAC11-202ENST00000402259 ADAMTS2O95450 1211 aa23.92■■□□□ 1.42
HDAC11-202ENST00000402259 ANKRD26Q9UPS8 1709 aa23.92■■□□□ 1.42
HDAC11-202ENST00000402259 NSD2O96028 1365 aa23.91■■□□□ 1.42
HDAC11-202ENST00000402259 NFAT5O94916 1531 aa23.9■■□□□ 1.42
HDAC11-202ENST00000402259 COG3Q96JB2 828 aa23.9■■□□□ 1.42
HDAC11-202ENST00000402259 ZRANB1Q9UGI0 708 aa23.9■■□□□ 1.42
HDAC11-202ENST00000402259 KNSTRNQ9Y448 316 aa23.9■■□□□ 1.42
HDAC11-202ENST00000402259 COL14A1Q05707 1796 aaKnown RBP23.9■■□□□ 1.42
HDAC11-202ENST00000402259 PER1O15534 1290 aaPredicted RBP23.89■■□□□ 1.41
HDAC11-202ENST00000402259 PLEKHG5O94827 1062 aa23.89■■□□□ 1.41
HDAC11-202ENST00000402259 NWD2Q9ULI1 1742 aa23.88■■□□□ 1.41
HDAC11-202ENST00000402259 GGNBP2Q9H3C7 697 aa23.87■■□□□ 1.41
HDAC11-202ENST00000402259 KIAA0232Q92628 1395 aa23.87■■□□□ 1.41
HDAC11-202ENST00000402259 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
HDAC11-202ENST00000402259 SLIT2O94813 1529 aa23.86■■□□□ 1.41
HDAC11-202ENST00000402259 FNBP4Q8N3X1 1017 aaPredicted RBP23.86■■□□□ 1.41
HDAC11-202ENST00000402259 C8orf37Q96NL8 207 aa23.86■■□□□ 1.41
HDAC11-202ENST00000402259 ABCC6O95255 1503 aa23.85■■□□□ 1.41
HDAC11-202ENST00000402259 NGLY1Q96IV0 654 aa23.85■■□□□ 1.41
HDAC11-202ENST00000402259 PRDM11Q9NQV5 511 aa23.85■■□□□ 1.41
HDAC11-202ENST00000402259 NPC1L1Q9UHC9 1359 aa23.85■■□□□ 1.41
HDAC11-202ENST00000402259 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.84■■□□□ 1.41
HDAC11-202ENST00000402259 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
HDAC11-202ENST00000402259 LMO7Q8WWI1 1683 aa23.83■■□□□ 1.41
HDAC11-202ENST00000402259 FAM83GA6ND36 823 aa23.83■■□□□ 1.41
HDAC11-202ENST00000402259 ZC3H6P61129 1189 aaKnown RBP23.83■■□□□ 1.41
HDAC11-202ENST00000402259 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
HDAC11-202ENST00000402259 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.41
HDAC11-202ENST00000402259 AFF2P51816 1311 aa23.83■■□□□ 1.4
HDAC11-202ENST00000402259 PHF23Q9BUL5 403 aaPredicted RBP23.82■■□□□ 1.4
HDAC11-202ENST00000402259 LTN1O94822 1766 aa23.82■■□□□ 1.4
HDAC11-202ENST00000402259 AATKQ6ZMQ8 1374 aa23.81■■□□□ 1.4
HDAC11-202ENST00000402259 COL18A1P39060 1754 aa23.81■■□□□ 1.4
HDAC11-202ENST00000402259 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
HDAC11-202ENST00000402259 NRAPQ86VF7 1730 aa23.8■■□□□ 1.4
HDAC11-202ENST00000402259 BCL9LQ86UU0 1499 aa23.8■■□□□ 1.4
HDAC11-202ENST00000402259 SOX12O15370 315 aa23.78■■□□□ 1.4
HDAC11-202ENST00000402259 RGS17Q9UGC6 210 aaPredicted RBP23.77■■□□□ 1.4
HDAC11-202ENST00000402259 USP21Q9UK80 565 aa23.77■■□□□ 1.4
HDAC11-202ENST00000402259 CHRNA2Q15822 529 aa23.76■■□□□ 1.39
HDAC11-202ENST00000402259 UNC5CLQ8IV45 518 aa23.76■■□□□ 1.39
HDAC11-202ENST00000402259 CAMTA1Q9Y6Y1 1673 aa23.76■■□□□ 1.39
HDAC11-202ENST00000402259 KIF24Q5T7B8 1368 aa23.76■■□□□ 1.39
HDAC11-202ENST00000402259 BTG4Q9NY30 223 aa23.75■■□□□ 1.39
HDAC11-202ENST00000402259 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
HDAC11-202ENST00000402259 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
HDAC11-202ENST00000402259 ATRNO75882 1429 aa23.74■■□□□ 1.39
HDAC11-202ENST00000402259 MORC1Q86VD1 984 aa23.73■■□□□ 1.39
HDAC11-202ENST00000402259 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
HDAC11-202ENST00000402259 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms