RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 METP08581 1390 aa8.29□□□□□ -1.08
CLIP4-202ENST00000401605 RYDENQ9NUL5 291 aaKnown RBP8.29□□□□□ -1.08
CLIP4-202ENST00000401605 SETBP1Q9Y6X0 1596 aa8.29□□□□□ -1.08
CLIP4-202ENST00000401605 DCCP43146 1447 aa8.29□□□□□ -1.08
CLIP4-202ENST00000401605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-202ENST00000401605 TEX2Q8IWB9 1127 aa8.29□□□□□ -1.08
CLIP4-202ENST00000401605 ZFP91Q96JP5 570 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-202ENST00000401605 RGS17Q9UGC6 210 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-202ENST00000401605 NCLP19338 710 aaKnown RBP8.28□□□□□ -1.08
CLIP4-202ENST00000401605 IRX6P78412 446 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-202ENST00000401605 XIRP1Q702N8 1843 aaKnown RBP8.28□□□□□ -1.08
CLIP4-202ENST00000401605 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-202ENST00000401605 ROBO1Q9Y6N7 1651 aa8.27□□□□□ -1.08
CLIP4-202ENST00000401605 BRINP3Q76B58 766 aa8.27□□□□□ -1.09
CLIP4-202ENST00000401605 YTHDC1Q96MU7 727 aaKnown RBP8.26□□□□□ -1.09
CLIP4-202ENST00000401605 ZBTB47Q9UFB7 747 aaPredicted RBP8.26□□□□□ -1.09
CLIP4-202ENST00000401605 SPATA31A6Q5VVP1 1343 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 NEXMIFQ5QGS0 1516 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 ZNF316A6NFI3 1004 aaPredicted RBP8.26□□□□□ -1.09
CLIP4-202ENST00000401605 PDE4DQ08499 809 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 FLIIQ13045 1269 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 CLTCL1P53675 1640 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 SPHKAPQ2M3C7 1700 aa8.26□□□□□ -1.09
CLIP4-202ENST00000401605 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
CLIP4-202ENST00000401605 MPHOSPH9Q99550 1183 aa8.25□□□□□ -1.09
CLIP4-202ENST00000401605 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.25□□□□□ -1.09
CLIP4-202ENST00000401605 CCDC144AA2RUR9 1427 aa8.25□□□□□ -1.09
CLIP4-202ENST00000401605 ADGRL3Q9HAR2 1447 aa8.25□□□□□ -1.09
CLIP4-202ENST00000401605 GSE1Q14687 1217 aa8.25□□□□□ -1.09
CLIP4-202ENST00000401605 MYO5BQ9ULV0 1848 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 NRXN3Q9Y4C0 1643 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 IRF5Q13568 498 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 MST1RQ04912 1400 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 PLEKHG3A1L390 1219 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 TRIM66O15016 1216 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 CLSTN1O94985 981 aa8.24□□□□□ -1.09
CLIP4-202ENST00000401605 CHRM1P11229 460 aaPredicted RBP8.24□□□□□ -1.09
CLIP4-202ENST00000401605 ROBO2Q9HCK4 1378 aa8.23□□□□□ -1.09
CLIP4-202ENST00000401605 MEX3CQ5U5Q3 659 aaKnown RBP8.23□□□□□ -1.09
CLIP4-202ENST00000401605 PRAG1Q86YV5 1406 aa8.23□□□□□ -1.09
CLIP4-202ENST00000401605 XRN1Q8IZH2 1706 aaKnown RBP8.23□□□□□ -1.09
CLIP4-202ENST00000401605 ANKRD30BQ9BXX2 1392 aa8.23□□□□□ -1.09
CLIP4-202ENST00000401605 AHDC1Q5TGY3 1603 aaPredicted RBP8.23□□□□□ -1.09
CLIP4-202ENST00000401605 E2F4Q16254 413 aa8.23□□□□□ -1.09
CLIP4-202ENST00000401605 RGL3Q3MIN7 710 aa8.23□□□□□ -1.09
CLIP4-202ENST00000401605 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
CLIP4-202ENST00000401605 LRRC59Q96AG4 307 aaKnown RBP8.23□□□□□ -1.09
CLIP4-202ENST00000401605 A6NJR5 290 aa8.22□□□□□ -1.09
CLIP4-202ENST00000401605 ZNF772Q68DY9 489 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-202ENST00000401605 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-202ENST00000401605 SETD5Q9C0A6 1442 aa8.22□□□□□ -1.09
CLIP4-202ENST00000401605 ASXL1Q8IXJ9 1541 aa8.22□□□□□ -1.09
CLIP4-202ENST00000401605 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-202ENST00000401605 E9PSI1 815 aa8.21□□□□□ -1.09
CLIP4-202ENST00000401605 USP35Q9P2H5 1018 aa8.21□□□□□ -1.09
CLIP4-202ENST00000401605 COL16A1Q07092 1604 aaPredicted RBP8.21□□□□□ -1.09
CLIP4-202ENST00000401605 SPATA31E1Q6ZUB1 1445 aa8.21□□□□□ -1.09
CLIP4-202ENST00000401605 ADGRF5Q8IZF2 1346 aa8.21□□□□□ -1.1
CLIP4-202ENST00000401605 C1orf167Q5SNV9 1468 aa8.21□□□□□ -1.1
CLIP4-202ENST00000401605 FTSJ3Q8IY81 847 aaKnown RBP8.2□□□□□ -1.1
CLIP4-202ENST00000401605 PHLPP1O60346 1717 aa8.2□□□□□ -1.1
CLIP4-202ENST00000401605 NUTM2BA6NNL0 878 aaPredicted RBP8.2□□□□□ -1.1
CLIP4-202ENST00000401605 NUTM2EB1AL46 878 aaPredicted RBP8.2□□□□□ -1.1
CLIP4-202ENST00000401605 RBM26Q5T8P6 1007 aaKnown RBP8.2□□□□□ -1.1
CLIP4-202ENST00000401605 NUTM2AQ8IVF1 878 aaPredicted RBP8.2□□□□□ -1.1
CLIP4-202ENST00000401605 CHMP4BQ9H444 224 aaKnown RBP8.2□□□□□ -1.1
CLIP4-202ENST00000401605 LRP6O75581 1613 aa8.2□□□□□ -1.1
CLIP4-202ENST00000401605 NUBP1P53384 320 aa8.19□□□□□ -1.1
CLIP4-202ENST00000401605 CNPY4Q8N129 248 aa8.19□□□□□ -1.1
CLIP4-202ENST00000401605 DDX17Q92841 729 aaKnown RBP8.19□□□□□ -1.1
CLIP4-202ENST00000401605 ORAI2Q96SN7 254 aa8.19□□□□□ -1.1
CLIP4-202ENST00000401605 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
CLIP4-202ENST00000401605 LRPPRCP42704 1394 aaKnown RBP8.19□□□□□ -1.1
CLIP4-202ENST00000401605 ABCC11Q96J66 1382 aa8.19□□□□□ -1.1
CLIP4-202ENST00000401605 DCAF8Q5TAQ9 597 aa8.18□□□□□ -1.1
CLIP4-202ENST00000401605 STK26Q9P289 416 aa8.18□□□□□ -1.1
CLIP4-202ENST00000401605 TECPR2O15040 1411 aa8.18□□□□□ -1.1
CLIP4-202ENST00000401605 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-202ENST00000401605 PNPLA6Q8IY17 1366 aa8.18□□□□□ -1.1
CLIP4-202ENST00000401605 RAB3GAP2Q9H2M9 1393 aa8.18□□□□□ -1.1
CLIP4-202ENST00000401605 PIK3C2GO75747 1445 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 FANCIQ9NVI1 1328 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 TMEM132EQ6IEE7 984 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
CLIP4-202ENST00000401605 CNGB1Q14028 1251 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-202ENST00000401605 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 WAPLQ7Z5K2 1190 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 SECISBP2LQ93073 1101 aaKnown RBP8.17□□□□□ -1.1
CLIP4-202ENST00000401605 BRPF3Q9ULD4 1205 aa8.17□□□□□ -1.1
CLIP4-202ENST00000401605 KIF1BO60333 1816 aa8.16□□□□□ -1.1
CLIP4-202ENST00000401605 NPHP3Q7Z494 1330 aa8.16□□□□□ -1.1
CLIP4-202ENST00000401605 RXRBP28702 533 aa8.16□□□□□ -1.1
CLIP4-202ENST00000401605 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
CLIP4-202ENST00000401605 SIRT1Q96EB6 747 aa8.16□□□□□ -1.1
CLIP4-202ENST00000401605 C8orf37Q96NL8 207 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms