RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 ZFYVE16Q7Z3T8 1539 aa23.06■■□□□ 1.28
GAREM2-201ENST00000401533 API5Q9BZZ5 524 aaKnown RBP23.05■■□□□ 1.28
GAREM2-201ENST00000401533 L1TD1Q5T7N2 865 aaKnown RBP23.04■■□□□ 1.28
GAREM2-201ENST00000401533 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
GAREM2-201ENST00000401533 MIS18AQ9NYP9 233 aa23.04■■□□□ 1.28
GAREM2-201ENST00000401533 GOLGA6L3A6NEY3 463 aa23.03■■□□□ 1.28
GAREM2-201ENST00000401533 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.03■■□□□ 1.28
GAREM2-201ENST00000401533 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
GAREM2-201ENST00000401533 MAGI2Q86UL8 1455 aa23.03■■□□□ 1.28
GAREM2-201ENST00000401533 IL27Q8NEV9 243 aa23.02■■□□□ 1.28
GAREM2-201ENST00000401533 FGD1P98174 961 aa23.02■■□□□ 1.28
GAREM2-201ENST00000401533 MCCP23508 829 aa23.02■■□□□ 1.28
GAREM2-201ENST00000401533 BRPF3Q9ULD4 1205 aa23.01■■□□□ 1.27
GAREM2-201ENST00000401533 NKTRP30414 1462 aaKnown RBP23.01■■□□□ 1.27
GAREM2-201ENST00000401533 CCDC9Q9Y3X0 531 aaKnown RBP23.01■■□□□ 1.27
GAREM2-201ENST00000401533 LRPPRCP42704 1394 aaKnown RBP23■■□□□ 1.27
GAREM2-201ENST00000401533 ARAP3Q8WWN8 1544 aa23■■□□□ 1.27
GAREM2-201ENST00000401533 NUDT16Q96DE0 195 aaKnown RBP23■■□□□ 1.27
GAREM2-201ENST00000401533 KIAA1211Q6ZU35 1233 aa22.99■■□□□ 1.27
GAREM2-201ENST00000401533 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
GAREM2-201ENST00000401533 PCDHB15Q9Y5E8 787 aa22.98■■□□□ 1.27
GAREM2-201ENST00000401533 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
GAREM2-201ENST00000401533 TEFQ10587 303 aa22.97■■□□□ 1.27
GAREM2-201ENST00000401533 PRDM15P57071 1507 aaPredicted RBP22.97■■□□□ 1.27
GAREM2-201ENST00000401533 RLBP1P12271 317 aa22.97■■□□□ 1.27
GAREM2-201ENST00000401533 TRIM27P14373 513 aa22.97■■□□□ 1.27
GAREM2-201ENST00000401533 ZNF518AQ6AHZ1 1483 aa22.96■■□□□ 1.27
GAREM2-201ENST00000401533 PTPRTO14522 1441 aa22.96■■□□□ 1.27
GAREM2-201ENST00000401533 MCM10Q7L590 875 aa22.96■■□□□ 1.27
GAREM2-201ENST00000401533 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
GAREM2-201ENST00000401533 FYB1O15117 783 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 ATAD2Q6PL18 1390 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 SLC4A2P04920 1241 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 ZRANB1Q9UGI0 708 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 FAM83GA6ND36 823 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 FCHSD2O94868 740 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 CHMP3Q9Y3E7 222 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 TRPM2O94759 1503 aa22.95■■□□□ 1.26
GAREM2-201ENST00000401533 PSME1Q06323 249 aa22.94■■□□□ 1.26
GAREM2-201ENST00000401533 ABTB2Q8N961 1025 aa22.93■■□□□ 1.26
GAREM2-201ENST00000401533 CHMP5Q9NZZ3 219 aa22.93■■□□□ 1.26
GAREM2-201ENST00000401533 DNTTIP2Q5QJE6 756 aaKnown RBP22.92■■□□□ 1.26
GAREM2-201ENST00000401533 DDX49Q9Y6V7 483 aaKnown RBP22.92■■□□□ 1.26
GAREM2-201ENST00000401533 E9PCH4 1651 aa22.92■■□□□ 1.26
GAREM2-201ENST00000401533 NFE2L2Q16236 605 aa22.91■■□□□ 1.26
GAREM2-201ENST00000401533 NCKAP5LQ9HCH0 1330 aa22.91■■□□□ 1.26
GAREM2-201ENST00000401533 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
GAREM2-201ENST00000401533 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
GAREM2-201ENST00000401533 ASXL1Q8IXJ9 1541 aa22.9■■□□□ 1.26
GAREM2-201ENST00000401533 ANO2Q9NQ90 1003 aa22.9■■□□□ 1.26
GAREM2-201ENST00000401533 ST18O60284 1047 aa22.9■■□□□ 1.26
GAREM2-201ENST00000401533 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
GAREM2-201ENST00000401533 AAMPQ13685 434 aa22.89■■□□□ 1.26
GAREM2-201ENST00000401533 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
GAREM2-201ENST00000401533 CHD1LQ86WJ1 897 aa22.87■■□□□ 1.25
GAREM2-201ENST00000401533 RNF123Q5XPI4 1314 aa22.87■■□□□ 1.25
GAREM2-201ENST00000401533 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
GAREM2-201ENST00000401533 XPCQ01831 940 aaPredicted RBP22.87■■□□□ 1.25
GAREM2-201ENST00000401533 AIMP1Q12904 312 aaKnown RBP22.86■■□□□ 1.25
GAREM2-201ENST00000401533 C9orf78Q9NZ63 289 aaPredicted RBP22.85■■□□□ 1.25
GAREM2-201ENST00000401533 TET3O43151 1660 aa22.84■■□□□ 1.25
GAREM2-201ENST00000401533 SEC24BO95487 1268 aa22.84■■□□□ 1.25
GAREM2-201ENST00000401533 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
GAREM2-201ENST00000401533 WASLO00401 505 aaPredicted RBP22.83■■□□□ 1.25
GAREM2-201ENST00000401533 POGZQ7Z3K3 1410 aa22.83■■□□□ 1.25
GAREM2-201ENST00000401533 INO80Q9ULG1 1556 aaPredicted RBP22.83■■□□□ 1.25
GAREM2-201ENST00000401533 C8orf34Q49A92 452 aa22.83■■□□□ 1.24
GAREM2-201ENST00000401533 GOLGA6L4A6NEF3 574 aa22.82■■□□□ 1.24
GAREM2-201ENST00000401533 ESCO1Q5FWF5 840 aa22.82■■□□□ 1.24
GAREM2-201ENST00000401533 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
GAREM2-201ENST00000401533 CDC45O75419 566 aa22.82■■□□□ 1.24
GAREM2-201ENST00000401533 F6X3S4 739 aa22.82■■□□□ 1.24
GAREM2-201ENST00000401533 DDX11L8A8MPP1 907 aa22.81■■□□□ 1.24
GAREM2-201ENST00000401533 SMARCA5O60264 1052 aaPredicted RBP22.81■■□□□ 1.24
GAREM2-201ENST00000401533 CT47B1P0C2W7 299 aaPredicted RBP22.81■■□□□ 1.24
GAREM2-201ENST00000401533 SPHKAPQ2M3C7 1700 aa22.81■■□□□ 1.24
GAREM2-201ENST00000401533 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
GAREM2-201ENST00000401533 LAMC1P11047 1609 aa22.79■■□□□ 1.24
GAREM2-201ENST00000401533 REC8O95072 547 aa22.79■■□□□ 1.24
GAREM2-201ENST00000401533 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
GAREM2-201ENST00000401533 USHBP1Q8N6Y0 703 aa22.79■■□□□ 1.24
GAREM2-201ENST00000401533 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
GAREM2-201ENST00000401533 NPATQ14207 1427 aa22.79■■□□□ 1.24
GAREM2-201ENST00000401533 TRAK2O60296 914 aa22.78■■□□□ 1.24
GAREM2-201ENST00000401533 SURF6O75683 361 aaKnown RBP22.78■■□□□ 1.24
GAREM2-201ENST00000401533 MSNP26038 577 aaKnown RBP22.78■■□□□ 1.24
GAREM2-201ENST00000401533 AEBP1Q8IUX7 1158 aa22.78■■□□□ 1.24
GAREM2-201ENST00000401533 EXOC6BQ9Y2D4 811 aa22.78■■□□□ 1.24
GAREM2-201ENST00000401533 GCC1Q96CN9 775 aa22.77■■□□□ 1.24
GAREM2-201ENST00000401533 NINLQ9Y2I6 1382 aa22.77■■□□□ 1.24
GAREM2-201ENST00000401533 UBTFL1P0CB47 393 aaPredicted RBP22.77■■□□□ 1.24
GAREM2-201ENST00000401533 KRT24Q2M2I5 525 aa22.77■■□□□ 1.24
GAREM2-201ENST00000401533 MCTP1Q6DN14 999 aa22.77■■□□□ 1.24
GAREM2-201ENST00000401533 TSPYL6Q8N831 410 aa22.77■■□□□ 1.24
GAREM2-201ENST00000401533 TBC1D2Q9BYX2 928 aa22.77■■□□□ 1.24
GAREM2-201ENST00000401533 HSP90AB2PQ58FF8 381 aa22.76■■□□□ 1.23
GAREM2-201ENST00000401533 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
GAREM2-201ENST00000401533 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
GAREM2-201ENST00000401533 HDGFL1Q5TGJ6 251 aa22.75■■□□□ 1.23
GAREM2-201ENST00000401533 ARID3AQ99856 593 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms