RNA–Protein interactions for RNA: ENST00000399600.8

SCIMP-201, Transcript of SLP adaptor and CSK interacting membrane protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCIMP, Length 1,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIMP-201ENST00000399600 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
SCIMP-201ENST00000399600 TNS3Q68CZ2 1445 aa12.92□□□□□ -0.34
SCIMP-201ENST00000399600 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
SCIMP-201ENST00000399600 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
SCIMP-201ENST00000399600 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
SCIMP-201ENST00000399600 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
SCIMP-201ENST00000399600 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
SCIMP-201ENST00000399600 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
SCIMP-201ENST00000399600 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
SCIMP-201ENST00000399600 ATAD2Q6PL18 1390 aa12.9□□□□□ -0.34
SCIMP-201ENST00000399600 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
SCIMP-201ENST00000399600 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
SCIMP-201ENST00000399600 C8orf37Q96NL8 207 aa12.88□□□□□ -0.35
SCIMP-201ENST00000399600 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
SCIMP-201ENST00000399600 NGLY1Q96IV0 654 aa12.87□□□□□ -0.35
SCIMP-201ENST00000399600 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
SCIMP-201ENST00000399600 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
SCIMP-201ENST00000399600 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
SCIMP-201ENST00000399600 ABCA3Q99758 1704 aa12.86□□□□□ -0.35
SCIMP-201ENST00000399600 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
SCIMP-201ENST00000399600 TMF1P82094 1093 aa12.86□□□□□ -0.35
SCIMP-201ENST00000399600 USP6P35125 1406 aa12.86□□□□□ -0.35
SCIMP-201ENST00000399600 SSH2Q76I76 1423 aa12.86□□□□□ -0.35
SCIMP-201ENST00000399600 AFF2P51816 1311 aa12.86□□□□□ -0.35
SCIMP-201ENST00000399600 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
SCIMP-201ENST00000399600 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
SCIMP-201ENST00000399600 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCIMP-201ENST00000399600 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
SCIMP-201ENST00000399600 ABTB2Q8N961 1025 aa12.85□□□□□ -0.35
SCIMP-201ENST00000399600 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
SCIMP-201ENST00000399600 HSPA5P11021 654 aaKnown RBP12.84□□□□□ -0.35
SCIMP-201ENST00000399600 RXRBP28702 533 aa12.84□□□□□ -0.35
SCIMP-201ENST00000399600 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
SCIMP-201ENST00000399600 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
SCIMP-201ENST00000399600 MON2Q7Z3U7 1717 aa12.83□□□□□ -0.36
SCIMP-201ENST00000399600 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
SCIMP-201ENST00000399600 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
SCIMP-201ENST00000399600 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
SCIMP-201ENST00000399600 KTN1Q86UP2 1357 aaKnown RBP12.82□□□□□ -0.36
SCIMP-201ENST00000399600 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
SCIMP-201ENST00000399600 NLRP13Q86W25 1043 aa12.82□□□□□ -0.36
SCIMP-201ENST00000399600 QTRT2Q9H974 415 aaKnown RBP12.82□□□□□ -0.36
SCIMP-201ENST00000399600 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
SCIMP-201ENST00000399600 NLRP6P59044 892 aa12.81□□□□□ -0.36
SCIMP-201ENST00000399600 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
SCIMP-201ENST00000399600 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
SCIMP-201ENST00000399600 USP21Q9UK80 565 aa12.81□□□□□ -0.36
SCIMP-201ENST00000399600 TTC21AQ8NDW8 1320 aa12.81□□□□□ -0.36
SCIMP-201ENST00000399600 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
SCIMP-201ENST00000399600 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
SCIMP-201ENST00000399600 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
SCIMP-201ENST00000399600 USP19O94966 1318 aa12.8□□□□□ -0.36
SCIMP-201ENST00000399600 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
SCIMP-201ENST00000399600 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
SCIMP-201ENST00000399600 SLIT2O94813 1529 aa12.79□□□□□ -0.36
SCIMP-201ENST00000399600 GCP02774 474 aa12.79□□□□□ -0.36
SCIMP-201ENST00000399600 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
SCIMP-201ENST00000399600 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
SCIMP-201ENST00000399600 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
SCIMP-201ENST00000399600 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
SCIMP-201ENST00000399600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCIMP-201ENST00000399600 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
SCIMP-201ENST00000399600 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.77□□□□□ -0.36
SCIMP-201ENST00000399600 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
SCIMP-201ENST00000399600 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
SCIMP-201ENST00000399600 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCIMP-201ENST00000399600 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
SCIMP-201ENST00000399600 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
SCIMP-201ENST00000399600 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
SCIMP-201ENST00000399600 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
SCIMP-201ENST00000399600 ZBTB22O15209 634 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
SCIMP-201ENST00000399600 NME9Q86XW9 330 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 PRDM11Q9NQV5 511 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 ATRNO75882 1429 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 MYOM1P52179 1685 aa12.76□□□□□ -0.37
SCIMP-201ENST00000399600 SLIT3O75094 1523 aa12.75□□□□□ -0.37
SCIMP-201ENST00000399600 CPDO75976 1380 aa12.75□□□□□ -0.37
SCIMP-201ENST00000399600 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
SCIMP-201ENST00000399600 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
SCIMP-201ENST00000399600 BTG4Q9NY30 223 aa12.75□□□□□ -0.37
SCIMP-201ENST00000399600 USP54Q70EL1 1684 aa12.74□□□□□ -0.37
SCIMP-201ENST00000399600 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
SCIMP-201ENST00000399600 CARD14Q9BXL6 1004 aa12.74□□□□□ -0.37
SCIMP-201ENST00000399600 VPS72Q15906 364 aa12.73□□□□□ -0.37
SCIMP-201ENST00000399600 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
SCIMP-201ENST00000399600 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
SCIMP-201ENST00000399600 COL18A1P39060 1754 aa12.72□□□□□ -0.37
SCIMP-201ENST00000399600 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
SCIMP-201ENST00000399600 FYB1O15117 783 aa12.72□□□□□ -0.37
SCIMP-201ENST00000399600 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
SCIMP-201ENST00000399600 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
SCIMP-201ENST00000399600 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
SCIMP-201ENST00000399600 CAMTA1Q9Y6Y1 1673 aa12.71□□□□□ -0.37
SCIMP-201ENST00000399600 GLI3P10071 1580 aa12.7□□□□□ -0.38
SCIMP-201ENST00000399600 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
SCIMP-201ENST00000399600 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
SCIMP-201ENST00000399600 NFAT5O94916 1531 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms