RNA–Protein interactions for RNA: ENST00000399206.4

LINC01588-201, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2

Gene LINC01588, Length 2,686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-201ENST00000399206 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
LINC01588-201ENST00000399206 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
LINC01588-201ENST00000399206 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
LINC01588-201ENST00000399206 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
LINC01588-201ENST00000399206 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
LINC01588-201ENST00000399206 BECN1Q14457 450 aa13.19□□□□□ -0.3
LINC01588-201ENST00000399206 PTPRMP28827 1452 aa13.19□□□□□ -0.3
LINC01588-201ENST00000399206 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
LINC01588-201ENST00000399206 ATAD2Q6PL18 1390 aa13.19□□□□□ -0.3
LINC01588-201ENST00000399206 CLTCQ00610 1675 aaKnown RBP13.19□□□□□ -0.3
LINC01588-201ENST00000399206 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
LINC01588-201ENST00000399206 SMC4Q9NTJ3 1288 aa13.18□□□□□ -0.3
LINC01588-201ENST00000399206 TERF2IPQ9NYB0 399 aa13.18□□□□□ -0.3
LINC01588-201ENST00000399206 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
LINC01588-201ENST00000399206 FYB1O15117 783 aa13.18□□□□□ -0.3
LINC01588-201ENST00000399206 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
LINC01588-201ENST00000399206 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
LINC01588-201ENST00000399206 POGKQ9P215 609 aa13.17□□□□□ -0.3
LINC01588-201ENST00000399206 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
LINC01588-201ENST00000399206 MED14O60244 1454 aa13.17□□□□□ -0.3
LINC01588-201ENST00000399206 KIF20BQ96Q89 1820 aa13.17□□□□□ -0.3
LINC01588-201ENST00000399206 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
LINC01588-201ENST00000399206 YEATS2Q9ULM3 1422 aa13.16□□□□□ -0.3
LINC01588-201ENST00000399206 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
LINC01588-201ENST00000399206 TRIM27P14373 513 aa13.16□□□□□ -0.3
LINC01588-201ENST00000399206 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
LINC01588-201ENST00000399206 RIPK4P57078 832 aa13.15□□□□□ -0.3
LINC01588-201ENST00000399206 IL16Q14005 1332 aa13.15□□□□□ -0.3
LINC01588-201ENST00000399206 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.31
LINC01588-201ENST00000399206 HDGFL2Q7Z4V5 671 aaPredicted RBP13.14□□□□□ -0.31
LINC01588-201ENST00000399206 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
LINC01588-201ENST00000399206 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
LINC01588-201ENST00000399206 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
LINC01588-201ENST00000399206 SLKQ9H2G2 1235 aaPredicted RBP13.14□□□□□ -0.31
LINC01588-201ENST00000399206 NOB1Q9ULX3 412 aaKnown RBP13.14□□□□□ -0.31
LINC01588-201ENST00000399206 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
LINC01588-201ENST00000399206 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
LINC01588-201ENST00000399206 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
LINC01588-201ENST00000399206 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
LINC01588-201ENST00000399206 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
LINC01588-201ENST00000399206 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
LINC01588-201ENST00000399206 FBXO31Q5XUX0 539 aaPredicted RBP13.11□□□□□ -0.31
LINC01588-201ENST00000399206 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
LINC01588-201ENST00000399206 TMEM57Q8N5G2 664 aa13.11□□□□□ -0.31
LINC01588-201ENST00000399206 TBC1D2Q9BYX2 928 aa13.11□□□□□ -0.31
LINC01588-201ENST00000399206 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
LINC01588-201ENST00000399206 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
LINC01588-201ENST00000399206 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
LINC01588-201ENST00000399206 ANTXR1Q9H6X2 564 aa13.1□□□□□ -0.31
LINC01588-201ENST00000399206 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
LINC01588-201ENST00000399206 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
LINC01588-201ENST00000399206 FCHSD2O94868 740 aa13.09□□□□□ -0.31
LINC01588-201ENST00000399206 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
LINC01588-201ENST00000399206 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
LINC01588-201ENST00000399206 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
LINC01588-201ENST00000399206 ZBTB22O15209 634 aa13.08□□□□□ -0.31
LINC01588-201ENST00000399206 SMC5Q8IY18 1101 aa13.08□□□□□ -0.31
LINC01588-201ENST00000399206 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.31
LINC01588-201ENST00000399206 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
LINC01588-201ENST00000399206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01588-201ENST00000399206 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
LINC01588-201ENST00000399206 FBLN1P23142 703 aa13.07□□□□□ -0.32
LINC01588-201ENST00000399206 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
LINC01588-201ENST00000399206 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
LINC01588-201ENST00000399206 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
LINC01588-201ENST00000399206 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
LINC01588-201ENST00000399206 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
LINC01588-201ENST00000399206 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
LINC01588-201ENST00000399206 ATP7BP35670 1465 aa13.05□□□□□ -0.32
LINC01588-201ENST00000399206 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
LINC01588-201ENST00000399206 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
LINC01588-201ENST00000399206 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
LINC01588-201ENST00000399206 SETD1AO15047 1707 aaKnown RBP13.04□□□□□ -0.32
LINC01588-201ENST00000399206 HMOX1P09601 288 aa13.04□□□□□ -0.32
LINC01588-201ENST00000399206 NUCB1Q02818 461 aa13.04□□□□□ -0.32
LINC01588-201ENST00000399206 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
LINC01588-201ENST00000399206 PPIP5K1Q6PFW1 1433 aa13.03□□□□□ -0.32
LINC01588-201ENST00000399206 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
LINC01588-201ENST00000399206 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
LINC01588-201ENST00000399206 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
LINC01588-201ENST00000399206 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
LINC01588-201ENST00000399206 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
LINC01588-201ENST00000399206 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
LINC01588-201ENST00000399206 DLG5Q8TDM6 1919 aa13.02□□□□□ -0.32
LINC01588-201ENST00000399206 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
LINC01588-201ENST00000399206 LNPKQ9C0E8 428 aa13.02□□□□□ -0.33
LINC01588-201ENST00000399206 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
LINC01588-201ENST00000399206 VAMP4O75379 141 aa13.01□□□□□ -0.33
LINC01588-201ENST00000399206 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
LINC01588-201ENST00000399206 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
LINC01588-201ENST00000399206 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
LINC01588-201ENST00000399206 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
LINC01588-201ENST00000399206 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
LINC01588-201ENST00000399206 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
LINC01588-201ENST00000399206 IL13P35225 146 aa13□□□□□ -0.33
LINC01588-201ENST00000399206 GNAI1P63096 354 aa13□□□□□ -0.33
LINC01588-201ENST00000399206 TSPOAP1O95153 1857 aa13□□□□□ -0.33
LINC01588-201ENST00000399206 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
LINC01588-201ENST00000399206 EDC4Q6P2E9 1401 aaKnown RBP12.99□□□□□ -0.33
LINC01588-201ENST00000399206 TSPYL6Q8N831 410 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms