RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP19-204ENST00000398896 HECW1Q76N89 1606 aa12.88□□□□□ -0.35
USP19-204ENST00000398896 REC8O95072 547 aa12.87□□□□□ -0.35
USP19-204ENST00000398896 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
USP19-204ENST00000398896 NPHP1O15259 732 aa12.87□□□□□ -0.35
USP19-204ENST00000398896 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
USP19-204ENST00000398896 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
USP19-204ENST00000398896 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
USP19-204ENST00000398896 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
USP19-204ENST00000398896 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
USP19-204ENST00000398896 TBC1D9Q6ZT07 1266 aa12.87□□□□□ -0.35
USP19-204ENST00000398896 RASSF4Q9H2L5 321 aa12.87□□□□□ -0.35
USP19-204ENST00000398896 TNNT1P13805 278 aa12.87□□□□□ -0.35
USP19-204ENST00000398896 TERF2Q15554 542 aa12.87□□□□□ -0.35
USP19-204ENST00000398896 C16orf45Q96MC5 204 aaPredicted RBP12.87□□□□□ -0.35
USP19-204ENST00000398896 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 RALGAPBQ86X10 1494 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
USP19-204ENST00000398896 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
USP19-204ENST00000398896 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■□□□□ 11.1
USP19-204ENST00000398896 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
USP19-204ENST00000398896 DDIT3P35638 169 aa12.85□□□□□ -0.35
USP19-204ENST00000398896 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
USP19-204ENST00000398896 NRDCO43847 1150 aa12.85□□□□□ -0.35
USP19-204ENST00000398896 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
USP19-204ENST00000398896 PAXBP1Q9Y5B6 917 aa12.85□□□□□ -0.35
USP19-204ENST00000398896 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
USP19-204ENST00000398896 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
USP19-204ENST00000398896 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
USP19-204ENST00000398896 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
USP19-204ENST00000398896 NEK4P51957 841 aa12.84□□□□□ -0.35
USP19-204ENST00000398896 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
USP19-204ENST00000398896 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
USP19-204ENST00000398896 ERBINQ96RT1 1412 aa12.84□□□□□ -0.35
USP19-204ENST00000398896 LOC102724159A0A0B4J2E5 919 aa12.83□□□□□ -0.35
USP19-204ENST00000398896 APBB1O00213 710 aa12.83□□□□□ -0.35
USP19-204ENST00000398896 SLFN14P0C7P3 912 aa12.83□□□□□ -0.35
USP19-204ENST00000398896 PWP2Q15269 919 aaKnown RBP12.83□□□□□ -0.35
USP19-204ENST00000398896 NUCB1Q02818 461 aa12.83□□□□□ -0.36
USP19-204ENST00000398896 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.36
USP19-204ENST00000398896 ARGLU1Q9NWB6 273 aaPredicted RBP12.83□□□□□ -0.36
USP19-204ENST00000398896 ATP6V1DQ9Y5K8 247 aa12.83□□□□□ -0.36
USP19-204ENST00000398896 SMTNL1A8MU46 457 aa12.83□□□□□ -0.36
USP19-204ENST00000398896 CCDC183Q5T5S1 534 aa12.83□□□□□ -0.36
USP19-204ENST00000398896 MYCBPQ99417 103 aaPredicted RBP12.83□□□□□ -0.36
USP19-204ENST00000398896 DEF6Q9H4E7 631 aa12.83□□□□□ -0.36
USP19-204ENST00000398896 TPM4P67936 248 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
USP19-204ENST00000398896 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 DAPK1P53355 1430 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
USP19-204ENST00000398896 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
USP19-204ENST00000398896 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 ZNF397Q8NF99 534 aaPredicted RBP12.82□□□□□ -0.36
USP19-204ENST00000398896 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 MCM2P49736 904 aa12.82□□□□□ -0.36
USP19-204ENST00000398896 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
USP19-204ENST00000398896 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
USP19-204ENST00000398896 DENND4BO75064 1496 aaPredicted RBP12.81□□□□□ -0.36
USP19-204ENST00000398896 ZGPATQ8N5A5 531 aaKnown RBP12.81□□□□□ -0.36
USP19-204ENST00000398896 GEMIN8Q9NWZ8 242 aaKnown RBP12.81□□□□□ -0.36
USP19-204ENST00000398896 KDM4AO75164 1064 aa12.81□□□□□ -0.36
USP19-204ENST00000398896 GDPD2Q9HCC8 539 aa12.81□□□□□ -0.36
USP19-204ENST00000398896 DDX41Q9UJV9 622 aaKnown RBP12.81□□□□□ -0.36
USP19-204ENST00000398896 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
USP19-204ENST00000398896 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 CT47B1P0C2W7 299 aaPredicted RBP12.8□□□□□ -0.36
USP19-204ENST00000398896 PKP1Q13835 747 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 CCDC192P0DO97 292 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 YY1AP1Q9H869 796 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 FEZ2Q9UHY8 353 aaPredicted RBP12.8□□□□□ -0.36
USP19-204ENST00000398896 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
USP19-204ENST00000398896 TRIM27P14373 513 aa12.79□□□□□ -0.36
USP19-204ENST00000398896 HNRNPH2P55795 449 aaKnown RBP12.79□□□□□ -0.36
USP19-204ENST00000398896 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
USP19-204ENST00000398896 POLR3GO15318 223 aaPredicted RBP12.79□□□□□ -0.36
USP19-204ENST00000398896 CAPN2P17655 700 aa12.79□□□□□ -0.36
USP19-204ENST00000398896 RNF20Q5VTR2 975 aa12.79□□□□□ -0.36
USP19-204ENST00000398896 GPRASP1Q5JY77 1395 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
USP19-204ENST00000398896 AK7Q96M32 723 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
USP19-204ENST00000398896 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
USP19-204ENST00000398896 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 TXLNBQ8N3L3 684 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 SPTLC3Q9NUV7 552 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
USP19-204ENST00000398896 KIAA1524Q8TCG1 905 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms