RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
VPREB3-202ENST00000398465 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
VPREB3-202ENST00000398465 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
VPREB3-202ENST00000398465 USP54Q70EL1 1684 aa18.1■□□□□ 0.49
VPREB3-202ENST00000398465 USP6P35125 1406 aa18.1■□□□□ 0.49
VPREB3-202ENST00000398465 ACEP12821 1306 aa18.1■□□□□ 0.49
VPREB3-202ENST00000398465 ADAMTS2O95450 1211 aa18.1■□□□□ 0.49
VPREB3-202ENST00000398465 POTEAQ6S8J7 498 aa18.1■□□□□ 0.49
VPREB3-202ENST00000398465 SLIT2O94813 1529 aa18.09■□□□□ 0.49
VPREB3-202ENST00000398465 USP47Q96K76 1375 aa18.08■□□□□ 0.49
VPREB3-202ENST00000398465 SOCS7O14512 581 aa18.08■□□□□ 0.48
VPREB3-202ENST00000398465 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
VPREB3-202ENST00000398465 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
VPREB3-202ENST00000398465 ATRNO75882 1429 aa18.06■□□□□ 0.48
VPREB3-202ENST00000398465 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
VPREB3-202ENST00000398465 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
VPREB3-202ENST00000398465 LMOD2Q6P5Q4 547 aa18.05■□□□□ 0.48
VPREB3-202ENST00000398465 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
VPREB3-202ENST00000398465 CPSF1Q10570 1443 aaKnown RBP18.05■□□□□ 0.48
VPREB3-202ENST00000398465 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
VPREB3-202ENST00000398465 SLIT3O75094 1523 aa18.04■□□□□ 0.48
VPREB3-202ENST00000398465 HAP1P54257 671 aaPredicted RBP18.04■□□□□ 0.48
VPREB3-202ENST00000398465 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
VPREB3-202ENST00000398465 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
VPREB3-202ENST00000398465 TESK2Q96S53 571 aa18.03■□□□□ 0.48
VPREB3-202ENST00000398465 MYOM1P52179 1685 aa18.03■□□□□ 0.48
VPREB3-202ENST00000398465 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
VPREB3-202ENST00000398465 CABP1Q9NZU7 370 aa18.02■□□□□ 0.48
VPREB3-202ENST00000398465 USP21Q9UK80 565 aa18.02■□□□□ 0.48
VPREB3-202ENST00000398465 LMO7Q8WWI1 1683 aa18.02■□□□□ 0.47
VPREB3-202ENST00000398465 GLI3P10071 1580 aa18.01■□□□□ 0.47
VPREB3-202ENST00000398465 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
VPREB3-202ENST00000398465 CABLES1Q8TDN4 633 aa18.01■□□□□ 0.47
VPREB3-202ENST00000398465 TRPC5Q9UL62 973 aaPredicted RBP18.01■□□□□ 0.47
VPREB3-202ENST00000398465 USP19O94966 1318 aa18■□□□□ 0.47
VPREB3-202ENST00000398465 RGS12O14924 1447 aa18■□□□□ 0.47
VPREB3-202ENST00000398465 RXRBP28702 533 aa17.99■□□□□ 0.47
VPREB3-202ENST00000398465 RBM6P78332 1123 aaKnown RBP17.98■□□□□ 0.47
VPREB3-202ENST00000398465 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
VPREB3-202ENST00000398465 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
VPREB3-202ENST00000398465 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
VPREB3-202ENST00000398465 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
VPREB3-202ENST00000398465 CPDO75976 1380 aa17.96■□□□□ 0.47
VPREB3-202ENST00000398465 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
VPREB3-202ENST00000398465 QTRT2Q9H974 415 aaKnown RBP17.96■□□□□ 0.47
VPREB3-202ENST00000398465 ABCC6O95255 1503 aa17.96■□□□□ 0.47
VPREB3-202ENST00000398465 EDC4Q6P2E9 1401 aaKnown RBP17.96■□□□□ 0.47
VPREB3-202ENST00000398465 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
VPREB3-202ENST00000398465 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
VPREB3-202ENST00000398465 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
VPREB3-202ENST00000398465 TMF1P82094 1093 aa17.94■□□□□ 0.46
VPREB3-202ENST00000398465 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
VPREB3-202ENST00000398465 LTN1O94822 1766 aa17.94■□□□□ 0.46
VPREB3-202ENST00000398465 NFAT5O94916 1531 aa17.93■□□□□ 0.46
VPREB3-202ENST00000398465 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
VPREB3-202ENST00000398465 COL18A1P39060 1754 aa17.93■□□□□ 0.46
VPREB3-202ENST00000398465 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
VPREB3-202ENST00000398465 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
VPREB3-202ENST00000398465 PRDM11Q9NQV5 511 aa17.92■□□□□ 0.46
VPREB3-202ENST00000398465 ANKRD36BQ8N2N9 1353 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 THSD7AQ9UPZ6 1657 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 VPS72Q15906 364 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
VPREB3-202ENST00000398465 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
VPREB3-202ENST00000398465 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
VPREB3-202ENST00000398465 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
VPREB3-202ENST00000398465 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
VPREB3-202ENST00000398465 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.46
VPREB3-202ENST00000398465 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.46
VPREB3-202ENST00000398465 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
VPREB3-202ENST00000398465 NLRP6P59044 892 aa17.88■□□□□ 0.45
VPREB3-202ENST00000398465 BTG4Q9NY30 223 aa17.88■□□□□ 0.45
VPREB3-202ENST00000398465 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
VPREB3-202ENST00000398465 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
VPREB3-202ENST00000398465 GCP02774 474 aa17.87■□□□□ 0.45
VPREB3-202ENST00000398465 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
VPREB3-202ENST00000398465 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
VPREB3-202ENST00000398465 EIF4G2P78344 907 aaKnown RBP eCLIP17.85■□□□□ 0.45
VPREB3-202ENST00000398465 KCNH5Q8NCM2 988 aa17.85■□□□□ 0.45
VPREB3-202ENST00000398465 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
VPREB3-202ENST00000398465 ANKRD26Q9UPS8 1709 aa17.85■□□□□ 0.45
VPREB3-202ENST00000398465 AATKQ6ZMQ8 1374 aa17.84■□□□□ 0.45
VPREB3-202ENST00000398465 PARP4Q9UKK3 1724 aaKnown RBP17.84■□□□□ 0.45
VPREB3-202ENST00000398465 EP400Q96L91 3159 aa17.83■□□□□ 0.45
VPREB3-202ENST00000398465 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
VPREB3-202ENST00000398465 SPATA31A5Q5VU36 1347 aa17.82■□□□□ 0.44
VPREB3-202ENST00000398465 SPATA31A7Q8IWB4 1347 aa17.82■□□□□ 0.44
VPREB3-202ENST00000398465 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
VPREB3-202ENST00000398465 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
VPREB3-202ENST00000398465 NME9Q86XW9 330 aa17.8■□□□□ 0.44
VPREB3-202ENST00000398465 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
VPREB3-202ENST00000398465 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
VPREB3-202ENST00000398465 CRB1P82279 1406 aa17.79■□□□□ 0.44
VPREB3-202ENST00000398465 LRRC37A3O60309 1634 aa17.79■□□□□ 0.44
VPREB3-202ENST00000398465 SPATA31A1Q5TZJ5 1347 aa17.78■□□□□ 0.44
VPREB3-202ENST00000398465 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms