RNA–Protein interactions for RNA: ENST00000398224.3

PDE9A-207, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-207ENST00000398224 SAMD9Q5K651 1589 aa13.57□□□□□ -0.24
PDE9A-207ENST00000398224 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
PDE9A-207ENST00000398224 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
PDE9A-207ENST00000398224 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
PDE9A-207ENST00000398224 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
PDE9A-207ENST00000398224 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
PDE9A-207ENST00000398224 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
PDE9A-207ENST00000398224 BSDC1Q9NW68 430 aaPredicted RBP13.56□□□□□ -0.24
PDE9A-207ENST00000398224 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
PDE9A-207ENST00000398224 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
PDE9A-207ENST00000398224 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
PDE9A-207ENST00000398224 CT47A1Q5JQC4 288 aaPredicted RBP13.56□□□□□ -0.24
PDE9A-207ENST00000398224 TXLNBQ8N3L3 684 aa13.56□□□□□ -0.24
PDE9A-207ENST00000398224 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
PDE9A-207ENST00000398224 MBD3O95983 291 aa13.55□□□□□ -0.24
PDE9A-207ENST00000398224 UHRF1BP1Q6BDS2 1440 aa13.55□□□□□ -0.24
PDE9A-207ENST00000398224 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
PDE9A-207ENST00000398224 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
PDE9A-207ENST00000398224 MAP2K1Q02750 393 aaPredicted RBP13.54□□□□□ -0.24
PDE9A-207ENST00000398224 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
PDE9A-207ENST00000398224 TSC1Q92574 1164 aa13.54□□□□□ -0.24
PDE9A-207ENST00000398224 CWC15Q9P013 229 aaKnown RBP13.54□□□□□ -0.24
PDE9A-207ENST00000398224 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 TRDNQ13061 729 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 CAVIN1Q6NZI2 390 aaKnown RBP13.53□□□□□ -0.24
PDE9A-207ENST00000398224 CCDC91Q7Z6B0 441 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 ZNF397Q8NF99 534 aaPredicted RBP13.53□□□□□ -0.24
PDE9A-207ENST00000398224 TCOF1Q13428 1488 aaKnown RBP13.53□□□□□ -0.24
PDE9A-207ENST00000398224 SMTNL1A8MU46 457 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 LMBRD1Q9NUN5 540 aa13.53□□□□□ -0.24
PDE9A-207ENST00000398224 CFTRP13569 1480 aa13.52□□□□□ -0.24
PDE9A-207ENST00000398224 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
PDE9A-207ENST00000398224 PDS5BQ9NTI5 1447 aa13.52□□□□□ -0.25
PDE9A-207ENST00000398224 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.25
PDE9A-207ENST00000398224 NOM1Q5C9Z4 860 aaKnown RBP13.52□□□□□ -0.25
PDE9A-207ENST00000398224 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
PDE9A-207ENST00000398224 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
PDE9A-207ENST00000398224 CHMP4CQ96CF2 233 aa13.52□□□□□ -0.25
PDE9A-207ENST00000398224 KNSTRNQ9Y448 316 aa13.52□□□□□ -0.25
PDE9A-207ENST00000398224 KIF3CO14782 793 aa13.51□□□□□ -0.25
PDE9A-207ENST00000398224 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
PDE9A-207ENST00000398224 CDCA8Q53HL2 280 aa13.51□□□□□ -0.25
PDE9A-207ENST00000398224 PAXBP1Q9Y5B6 917 aa13.51□□□□□ -0.25
PDE9A-207ENST00000398224 GSCP56915 257 aaPredicted RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 TMED8Q6PL24 325 aaPredicted RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 SSR1P43307 286 aaKnown RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 TEX35Q5T0J7 233 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 KIAA1524Q8TCG1 905 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.5□□□□□ -0.25
PDE9A-207ENST00000398224 KANK1Q14678 1352 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
PDE9A-207ENST00000398224 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 GOLIM4O00461 696 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 SLFN5Q08AF3 891 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 RABEP1Q15276 862 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 SUGP1Q8IWZ8 645 aaKnown RBP13.49□□□□□ -0.25
PDE9A-207ENST00000398224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDE9A-207ENST00000398224 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 MPHOSPH9Q99550 1183 aa13.49□□□□□ -0.25
PDE9A-207ENST00000398224 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
PDE9A-207ENST00000398224 TACO1Q9BSH4 297 aaKnown RBP13.49□□□□□ -0.25
PDE9A-207ENST00000398224 RWDD1Q9H446 243 aaPredicted RBP13.49□□□□□ -0.25
PDE9A-207ENST00000398224 SUPT6HQ7KZ85 1726 aaKnown RBP13.49□□□□□ -0.25
PDE9A-207ENST00000398224 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
PDE9A-207ENST00000398224 TSPY26PQ9H489 355 aa13.48□□□□□ -0.25
PDE9A-207ENST00000398224 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
PDE9A-207ENST00000398224 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
PDE9A-207ENST00000398224 JRKLQ9Y4A0 524 aa13.48□□□□□ -0.25
PDE9A-207ENST00000398224 ARHGEF12Q9NZN5 1544 aa13.48□□□□□ -0.25
PDE9A-207ENST00000398224 ERICH4A6NGS2 130 aa13.47□□□□□ -0.25
PDE9A-207ENST00000398224 SSFA2P28290 1259 aa13.47□□□□□ -0.25
PDE9A-207ENST00000398224 NBPF10Q6P3W6 841 aaKnown RBP13.47□□□□□ -0.25
PDE9A-207ENST00000398224 V9GYY5 206 aaPredicted RBP13.47□□□□□ -0.25
PDE9A-207ENST00000398224 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
PDE9A-207ENST00000398224 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
PDE9A-207ENST00000398224 TDO2P48775 406 aa13.47□□□□□ -0.25
PDE9A-207ENST00000398224 ZKSCAN8Q15776 578 aaPredicted RBP13.47□□□□□ -0.25
PDE9A-207ENST00000398224 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
PDE9A-207ENST00000398224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.26
PDE9A-207ENST00000398224 MYO1CO00159 1063 aa13.46□□□□□ -0.26
PDE9A-207ENST00000398224 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.26
PDE9A-207ENST00000398224 ZBTB9Q96C00 473 aa13.46□□□□□ -0.26
PDE9A-207ENST00000398224 CXorf56Q9H5V9 222 aa13.46□□□□□ -0.26
PDE9A-207ENST00000398224 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
PDE9A-207ENST00000398224 PPP1R12AO14974 1030 aaPredicted RBP13.45□□□□□ -0.26
PDE9A-207ENST00000398224 GPS2Q13227 327 aa13.45□□□□□ -0.26
PDE9A-207ENST00000398224 FAM43BQ6ZT52 329 aaPredicted RBP13.45□□□□□ -0.26
PDE9A-207ENST00000398224 IQUBQ8NA54 791 aa13.45□□□□□ -0.26
PDE9A-207ENST00000398224 USP25Q9UHP3 1055 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms