RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
RGPD1-201ENST00000398193 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
RGPD1-201ENST00000398193 RRP1P56182 461 aaKnown RBP9.73□□□□□ -0.85
RGPD1-201ENST00000398193 SLFN5Q08AF3 891 aa9.73□□□□□ -0.85
RGPD1-201ENST00000398193 KIF24Q5T7B8 1368 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 USP6P35125 1406 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 WAPLQ7Z5K2 1190 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 IL16Q14005 1332 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 SETD1BQ9UPS6 1966 aaKnown RBP9.72□□□□□ -0.85
RGPD1-201ENST00000398193 OVOS2A0A0J9YW53 1432 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 OVOS2Q6IE36 1432 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
RGPD1-201ENST00000398193 KIF1AQ12756 1690 aa9.72□□□□□ -0.85
RGPD1-201ENST00000398193 ANKLE2Q86XL3 938 aa9.71□□□□□ -0.85
RGPD1-201ENST00000398193 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.85
RGPD1-201ENST00000398193 MTHFSP49914 203 aa9.71□□□□□ -0.86
RGPD1-201ENST00000398193 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.71□□□□□ -0.86
RGPD1-201ENST00000398193 RGPD1P0DJD0 1748 aa9.7□□□□□ -0.86
RGPD1-201ENST00000398193 BCANQ96GW7 911 aa9.7□□□□□ -0.86
RGPD1-201ENST00000398193 CEBPAP49715 358 aaPredicted RBP9.69□□□□□ -0.86
RGPD1-201ENST00000398193 AAMPQ13685 434 aa9.69□□□□□ -0.86
RGPD1-201ENST00000398193 SAFB2Q14151 953 aaKnown RBP eCLIP9.69□□□□□ -0.86
RGPD1-201ENST00000398193 DUSP27Q5VZP5 1158 aa9.69□□□□□ -0.86
RGPD1-201ENST00000398193 AMOTL2Q9Y2J4 779 aa9.69□□□□□ -0.86
RGPD1-201ENST00000398193 PHRF1Q9P1Y6 1649 aaKnown RBP9.69□□□□□ -0.86
RGPD1-201ENST00000398193 MST1RQ04912 1400 aa9.69□□□□□ -0.86
RGPD1-201ENST00000398193 ADGRL3Q9HAR2 1447 aa9.69□□□□□ -0.86
RGPD1-201ENST00000398193 CNGB1Q14028 1251 aaPredicted RBP9.69□□□□□ -0.86
RGPD1-201ENST00000398193 DIAPH1O60610 1272 aaKnown RBP9.68□□□□□ -0.86
RGPD1-201ENST00000398193 FCHSD2O94868 740 aa9.68□□□□□ -0.86
RGPD1-201ENST00000398193 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
RGPD1-201ENST00000398193 PLEKHF1Q96S99 279 aa9.68□□□□□ -0.86
RGPD1-201ENST00000398193 PRR36Q9H6K5 1346 aa9.68□□□□□ -0.86
RGPD1-201ENST00000398193 COG3Q96JB2 828 aa9.68□□□□□ -0.86
RGPD1-201ENST00000398193 MAP2P11137 1827 aaKnown RBP9.67□□□□□ -0.86
RGPD1-201ENST00000398193 MARF1Q9Y4F3 1742 aaKnown RBP9.67□□□□□ -0.86
RGPD1-201ENST00000398193 PIK3C2AO00443 1686 aa9.67□□□□□ -0.86
RGPD1-201ENST00000398193 MYH16Q9H6N6 1097 aa9.67□□□□□ -0.86
RGPD1-201ENST00000398193 TTC21BQ7Z4L5 1316 aa9.66□□□□□ -0.86
RGPD1-201ENST00000398193 DCCP43146 1447 aa9.66□□□□□ -0.86
RGPD1-201ENST00000398193 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
RGPD1-201ENST00000398193 CALD1Q05682 793 aaKnown RBP9.66□□□□□ -0.86
RGPD1-201ENST00000398193 RTL1A6NKG5 1358 aa9.66□□□□□ -0.86
RGPD1-201ENST00000398193 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
RGPD1-201ENST00000398193 APAF1O14727 1248 aa9.65□□□□□ -0.86
RGPD1-201ENST00000398193 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
RGPD1-201ENST00000398193 PEAK1Q9H792 1746 aa9.64□□□□□ -0.87
RGPD1-201ENST00000398193 ACEP12821 1306 aa9.64□□□□□ -0.87
RGPD1-201ENST00000398193 POLKQ9UBT6 870 aa9.64□□□□□ -0.87
RGPD1-201ENST00000398193 MAPK8IP3Q9UPT6 1336 aa9.64□□□□□ -0.87
RGPD1-201ENST00000398193 ABCC6O95255 1503 aa9.64□□□□□ -0.87
RGPD1-201ENST00000398193 KCNA6P17658 529 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 TCP11L2Q8N4U5 519 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 LMOD3Q0VAK6 560 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 NEFMP07197 916 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 IL13P35225 146 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 CCDC146Q8IYE0 955 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
RGPD1-201ENST00000398193 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
RGPD1-201ENST00000398193 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
RGPD1-201ENST00000398193 LMTK3Q96Q04 1460 aa9.62□□□□□ -0.87
RGPD1-201ENST00000398193 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
RGPD1-201ENST00000398193 MS4A1P11836 297 aa9.62□□□□□ -0.87
RGPD1-201ENST00000398193 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
RGPD1-201ENST00000398193 SLIT3O75094 1523 aa9.62□□□□□ -0.87
RGPD1-201ENST00000398193 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
RGPD1-201ENST00000398193 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
RGPD1-201ENST00000398193 TRPM3Q9HCF6 1732 aaPredicted RBP9.61□□□□□ -0.87
RGPD1-201ENST00000398193 SLC26A8Q96RN1 970 aa9.61□□□□□ -0.87
RGPD1-201ENST00000398193 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
RGPD1-201ENST00000398193 CAMTA1Q9Y6Y1 1673 aa9.6□□□□□ -0.87
RGPD1-201ENST00000398193 NME9Q86XW9 330 aa9.6□□□□□ -0.87
RGPD1-201ENST00000398193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.6□□□□□ -0.87
RGPD1-201ENST00000398193 LRRC37A3O60309 1634 aa9.6□□□□□ -0.87
RGPD1-201ENST00000398193 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
RGPD1-201ENST00000398193 FLT4P35916 1363 aa9.6□□□□□ -0.87
RGPD1-201ENST00000398193 BRPF1P55201 1214 aaPredicted RBP9.59□□□□□ -0.87
RGPD1-201ENST00000398193 NFE2L2Q16236 605 aa9.59□□□□□ -0.87
RGPD1-201ENST00000398193 NFAT5O94916 1531 aa9.59□□□□□ -0.87
RGPD1-201ENST00000398193 CCDC136Q96JN2 1154 aa9.58□□□□□ -0.88
RGPD1-201ENST00000398193 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
RGPD1-201ENST00000398193 ALDH1L2Q3SY69 923 aa9.57□□□□□ -0.88
RGPD1-201ENST00000398193 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
RGPD1-201ENST00000398193 TRIM35Q9UPQ4 493 aa9.57□□□□□ -0.88
RGPD1-201ENST00000398193 MED1Q15648 1581 aaPredicted RBP9.57□□□□□ -0.88
RGPD1-201ENST00000398193 KDRP35968 1356 aa9.57□□□□□ -0.88
RGPD1-201ENST00000398193 ALS2Q96Q42 1657 aa9.57□□□□□ -0.88
RGPD1-201ENST00000398193 U2SURPO15042 1029 aaKnown RBP9.57□□□□□ -0.88
RGPD1-201ENST00000398193 HTATSF1O43719 755 aaKnown RBP9.56□□□□□ -0.88
RGPD1-201ENST00000398193 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
RGPD1-201ENST00000398193 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
RGPD1-201ENST00000398193 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
RGPD1-201ENST00000398193 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
RGPD1-201ENST00000398193 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
RGPD1-201ENST00000398193 LTN1O94822 1766 aa9.55□□□□□ -0.88
RGPD1-201ENST00000398193 DLG5Q8TDM6 1919 aa9.55□□□□□ -0.88
RGPD1-201ENST00000398193 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
RGPD1-201ENST00000398193 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms