RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 DAAM2Q86T65 1068 aa15.21■□□□□ 0.03
CCBE1-201ENST00000398179 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
CCBE1-201ENST00000398179 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.02
CCBE1-201ENST00000398179 CEP135Q66GS9 1140 aa15.21■□□□□ 0.02
CCBE1-201ENST00000398179 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.21■□□□□ 0.02
CCBE1-201ENST00000398179 TRERF1Q96PN7 1200 aa15.21■□□□□ 0.02
CCBE1-201ENST00000398179 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
CCBE1-201ENST00000398179 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
CCBE1-201ENST00000398179 ESF1Q9H501 851 aaKnown RBP15.2■□□□□ 0.02
CCBE1-201ENST00000398179 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
CCBE1-201ENST00000398179 FEZ1Q99689 392 aa15.2■□□□□ 0.02
CCBE1-201ENST00000398179 A0A0G2JS52 829 aa15.2■□□□□ 0.02
CCBE1-201ENST00000398179 DRC1Q96MC2 740 aa15.2■□□□□ 0.02
CCBE1-201ENST00000398179 FEZ2Q9UHY8 353 aaPredicted RBP15.2■□□□□ 0.02
CCBE1-201ENST00000398179 RNF8O76064 485 aa15.19■□□□□ 0.02
CCBE1-201ENST00000398179 PRPHP41219 470 aa15.19■□□□□ 0.02
CCBE1-201ENST00000398179 PSMD7P51665 324 aa15.19■□□□□ 0.02
CCBE1-201ENST00000398179 TRDNQ13061 729 aa15.19■□□□□ 0.02
CCBE1-201ENST00000398179 ZNF500O60304 480 aaPredicted RBP15.19■□□□□ 0.02
CCBE1-201ENST00000398179 NFKBIBQ15653 356 aa15.19■□□□□ 0.02
CCBE1-201ENST00000398179 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
CCBE1-201ENST00000398179 KIF2CQ99661 725 aa15.18■□□□□ 0.02
CCBE1-201ENST00000398179 IRAK4Q9NWZ3 460 aa15.18■□□□□ 0.02
CCBE1-201ENST00000398179 PPP2R5AQ15172 486 aa15.18■□□□□ 0.02
CCBE1-201ENST00000398179 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
CCBE1-201ENST00000398179 TPD52L2O43399 206 aaKnown RBP15.17■□□□□ 0.02
CCBE1-201ENST00000398179 CLCN1P35523 988 aa15.17■□□□□ 0.02
CCBE1-201ENST00000398179 RGL3Q3MIN7 710 aa15.17■□□□□ 0.02
CCBE1-201ENST00000398179 CCAR2Q8N163 923 aaKnown RBP15.17■□□□□ 0.02
CCBE1-201ENST00000398179 IQCGQ9H095 443 aaKnown RBP15.17■□□□□ 0.02
CCBE1-201ENST00000398179 CC2D2BQ6DHV5 1058 aa15.16■□□□□ 0.02
CCBE1-201ENST00000398179 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
CCBE1-201ENST00000398179 KIF2AO00139 706 aaPredicted RBP15.16■□□□□ 0.02
CCBE1-201ENST00000398179 TRIM21P19474 475 aaKnown RBP15.16■□□□□ 0.02
CCBE1-201ENST00000398179 NASPP49321 788 aaPredicted RBP15.16■□□□□ 0.02
CCBE1-201ENST00000398179 JAKMIP3Q5VZ66 844 aa15.16■□□□□ 0.02
CCBE1-201ENST00000398179 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
CCBE1-201ENST00000398179 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCBE1-201ENST00000398179 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
CCBE1-201ENST00000398179 MAP7D1Q3KQU3 841 aa15.15■□□□□ 0.02
CCBE1-201ENST00000398179 DNAJC21Q5F1R6 531 aaKnown RBP15.15■□□□□ 0.02
CCBE1-201ENST00000398179 MS4A1P11836 297 aa15.15■□□□□ 0.02
CCBE1-201ENST00000398179 MAFGO15525 162 aa15.15■□□□□ 0.02
CCBE1-201ENST00000398179 ERCC3P19447 782 aa15.15■□□□□ 0.02
CCBE1-201ENST00000398179 ERLIN1O75477 346 aa15.15■□□□□ 0.02
CCBE1-201ENST00000398179 UBAP1Q9NZ09 502 aa15.15■□□□□ 0.02
CCBE1-201ENST00000398179 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-201ENST00000398179 WDR63Q8IWG1 891 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 LRRC23Q53EV4 343 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-201ENST00000398179 PPFIA3O75145 1194 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 ZSCAN30Q86W11 494 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 SEPT8Q92599 483 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-201ENST00000398179 PEX14O75381 377 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 STAC3Q96MF2 364 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 MCM6Q14566 821 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 GRIPAP1Q4V328 841 aa15.14■□□□□ 0.01
CCBE1-201ENST00000398179 CTNNBL1Q8WYA6 563 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-201ENST00000398179 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 SF3A1Q15459 793 aaKnown RBP15.13■□□□□ 0.01
CCBE1-201ENST00000398179 NAP1L3Q99457 506 aaPredicted RBP15.13■□□□□ 0.01
CCBE1-201ENST00000398179 SEPT10Q9P0V9 454 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 MTUS2Q5JR59 1369 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 GBP7Q8N8V2 638 aaPredicted RBP15.13■□□□□ 0.01
CCBE1-201ENST00000398179 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
CCBE1-201ENST00000398179 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 DESP17661 470 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 GCKP35557 465 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 SMC1AQ14683 1233 aaKnown RBP15.13■□□□□ 0.01
CCBE1-201ENST00000398179 ZKSCAN8Q15776 578 aaPredicted RBP15.13■□□□□ 0.01
CCBE1-201ENST00000398179 YY1AP1Q9H869 796 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 RAI14Q9P0K7 980 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 BRD3Q15059 726 aa15.13■□□□□ 0.01
CCBE1-201ENST00000398179 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
CCBE1-201ENST00000398179 UBA5Q9GZZ9 404 aa15.12■□□□□ 0.01
CCBE1-201ENST00000398179 MARCH6O60337 910 aa15.12■□□□□ 0.01
CCBE1-201ENST00000398179 ZFYP08048 801 aaPredicted RBP15.12■□□□□ 0.01
CCBE1-201ENST00000398179 DMTNQ08495 405 aa15.12■□□□□ 0.01
CCBE1-201ENST00000398179 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
CCBE1-201ENST00000398179 GABPB1Q06547 395 aaPredicted RBP15.12■□□□□ 0.01
CCBE1-201ENST00000398179 IFT57Q9NWB7 429 aa15.12■□□□□ 0.01
CCBE1-201ENST00000398179 TCEAL9Q9UHQ7 104 aa15.12■□□□□ 0.01
CCBE1-201ENST00000398179 CLNS1AP54105 237 aaKnown RBP15.11■□□□□ 0.01
CCBE1-201ENST00000398179 RABGAP1Q9Y3P9 1069 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 CLIP1P30622 1438 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 ECM2O94769 699 aaPredicted RBP15.11■□□□□ 0.01
CCBE1-201ENST00000398179 NAA25Q14CX7 972 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 KRT222Q8N1A0 295 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 CHCHD3Q9NX63 227 aaKnown RBP15.11■□□□□ 0.01
CCBE1-201ENST00000398179 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 U2SURPO15042 1029 aaKnown RBP15.11■□□□□ 0.01
CCBE1-201ENST00000398179 CCDC146Q8IYE0 955 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
CCBE1-201ENST00000398179 GMNNO75496 209 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 CEP128Q6ZU80 1094 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 CCDC112Q8NEF3 446 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 CCDC144CPQ8IYA2 1237 aa15.1■□□□□ 0.01
CCBE1-201ENST00000398179 MSL3Q8N5Y2 521 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms