RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
CHRFAM7A-202ENST00000397827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHRFAM7A-202ENST00000397827 FBLN1P23142 703 aa23.62■■□□□ 1.37
CHRFAM7A-202ENST00000397827 COL3A1P02461 1466 aaPredicted RBP23.62■■□□□ 1.37
CHRFAM7A-202ENST00000397827 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
CHRFAM7A-202ENST00000397827 AGLP35573 1532 aa23.61■■□□□ 1.37
CHRFAM7A-202ENST00000397827 TMPOP42166 694 aaKnown RBP23.61■■□□□ 1.37
CHRFAM7A-202ENST00000397827 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
CHRFAM7A-202ENST00000397827 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
CHRFAM7A-202ENST00000397827 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
CHRFAM7A-202ENST00000397827 REREQ9P2R6 1566 aa23.59■■□□□ 1.37
CHRFAM7A-202ENST00000397827 TRIM35Q9UPQ4 493 aa23.58■■□□□ 1.37
CHRFAM7A-202ENST00000397827 LAS1LQ9Y4W2 734 aaKnown RBP23.58■■□□□ 1.37
CHRFAM7A-202ENST00000397827 ANKRD26Q9UPS8 1709 aa23.58■■□□□ 1.36
CHRFAM7A-202ENST00000397827 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
CHRFAM7A-202ENST00000397827 DIAPH1O60610 1272 aaKnown RBP23.57■■□□□ 1.36
CHRFAM7A-202ENST00000397827 EIF5BO60841 1220 aaKnown RBP23.57■■□□□ 1.36
CHRFAM7A-202ENST00000397827 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
CHRFAM7A-202ENST00000397827 MED14O60244 1454 aa23.57■■□□□ 1.36
CHRFAM7A-202ENST00000397827 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
CHRFAM7A-202ENST00000397827 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
CHRFAM7A-202ENST00000397827 PCDHB15Q9Y5E8 787 aa23.55■■□□□ 1.36
CHRFAM7A-202ENST00000397827 RIPK4P57078 832 aa23.54■■□□□ 1.36
CHRFAM7A-202ENST00000397827 DDRGK1Q96HY6 314 aa23.53■■□□□ 1.36
CHRFAM7A-202ENST00000397827 SLC4A3P48751 1232 aa23.53■■□□□ 1.36
CHRFAM7A-202ENST00000397827 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
CHRFAM7A-202ENST00000397827 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.35
CHRFAM7A-202ENST00000397827 SETD1AO15047 1707 aaKnown RBP23.51■■□□□ 1.35
CHRFAM7A-202ENST00000397827 METP08581 1390 aa23.51■■□□□ 1.35
CHRFAM7A-202ENST00000397827 KIF20BQ96Q89 1820 aa23.51■■□□□ 1.35
CHRFAM7A-202ENST00000397827 ESF1Q9H501 851 aaKnown RBP23.51■■□□□ 1.35
CHRFAM7A-202ENST00000397827 DLC1Q96QB1 1528 aa23.51■■□□□ 1.35
CHRFAM7A-202ENST00000397827 SMC4Q9NTJ3 1288 aa23.5■■□□□ 1.35
CHRFAM7A-202ENST00000397827 POLKQ9UBT6 870 aa23.5■■□□□ 1.35
CHRFAM7A-202ENST00000397827 ZKSCAN2Q63HK3 967 aa23.49■■□□□ 1.35
CHRFAM7A-202ENST00000397827 ZMYM3Q14202 1370 aa23.49■■□□□ 1.35
CHRFAM7A-202ENST00000397827 PMFBP1Q8TBY8 1022 aa23.49■■□□□ 1.35
CHRFAM7A-202ENST00000397827 NCKAP5LQ9HCH0 1330 aa23.49■■□□□ 1.35
CHRFAM7A-202ENST00000397827 FTSJ3Q8IY81 847 aaKnown RBP23.48■■□□□ 1.35
CHRFAM7A-202ENST00000397827 WASLO00401 505 aaPredicted RBP23.47■■□□□ 1.35
CHRFAM7A-202ENST00000397827 SSH1Q8WYL5 1049 aa23.47■■□□□ 1.35
CHRFAM7A-202ENST00000397827 MVPQ14764 893 aaKnown RBP23.47■■□□□ 1.35
CHRFAM7A-202ENST00000397827 DZIP1LQ8IYY4 767 aaKnown RBP23.46■■□□□ 1.35
CHRFAM7A-202ENST00000397827 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
CHRFAM7A-202ENST00000397827 ATP7BP35670 1465 aa23.46■■□□□ 1.35
CHRFAM7A-202ENST00000397827 NRXN3Q9Y4C0 1643 aa23.46■■□□□ 1.35
CHRFAM7A-202ENST00000397827 PRKAR2BP31323 418 aa23.46■■□□□ 1.35
CHRFAM7A-202ENST00000397827 NME9Q86XW9 330 aa23.46■■□□□ 1.35
CHRFAM7A-202ENST00000397827 HMOX1P09601 288 aa23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 CT47B1P0C2W7 299 aaPredicted RBP23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 PKNOX2Q96KN3 472 aa23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 PPIP5K1Q6PFW1 1433 aa23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 FCHSD2O94868 740 aa23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 AAMPQ13685 434 aa23.45■■□□□ 1.34
CHRFAM7A-202ENST00000397827 TRIM27P14373 513 aa23.44■■□□□ 1.34
CHRFAM7A-202ENST00000397827 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHRFAM7A-202ENST00000397827 RSPH6AQ9H0K4 717 aa23.44■■□□□ 1.34
CHRFAM7A-202ENST00000397827 PNNQ9H307 717 aaKnown RBP23.44■■□□□ 1.34
CHRFAM7A-202ENST00000397827 NEFMP07197 916 aa23.43■■□□□ 1.34
CHRFAM7A-202ENST00000397827 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
CHRFAM7A-202ENST00000397827 IL16Q14005 1332 aa23.43■■□□□ 1.34
CHRFAM7A-202ENST00000397827 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
CHRFAM7A-202ENST00000397827 SEC24BO95487 1268 aa23.42■■□□□ 1.34
CHRFAM7A-202ENST00000397827 NUDT16Q96DE0 195 aaKnown RBP23.42■■□□□ 1.34
CHRFAM7A-202ENST00000397827 PDZRN3Q9UPQ7 1066 aa23.42■■□□□ 1.34
CHRFAM7A-202ENST00000397827 PHACTR3Q96KR7 559 aa23.41■■□□□ 1.34
CHRFAM7A-202ENST00000397827 DAXXQ9UER7 740 aaPredicted RBP23.41■■□□□ 1.34
CHRFAM7A-202ENST00000397827 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
CHRFAM7A-202ENST00000397827 CPSF1Q10570 1443 aaKnown RBP23.41■■□□□ 1.34
CHRFAM7A-202ENST00000397827 RWDD1Q9H446 243 aaPredicted RBP23.4■■□□□ 1.34
CHRFAM7A-202ENST00000397827 ATF7IPQ6VMQ6 1270 aa23.39■■□□□ 1.34
CHRFAM7A-202ENST00000397827 ITPRIPQ8IWB1 547 aa23.39■■□□□ 1.34
CHRFAM7A-202ENST00000397827 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.33
CHRFAM7A-202ENST00000397827 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
CHRFAM7A-202ENST00000397827 FAM135BQ49AJ0 1406 aa23.38■■□□□ 1.33
CHRFAM7A-202ENST00000397827 THUMPD2Q9BTF0 503 aaKnown RBP23.38■■□□□ 1.33
CHRFAM7A-202ENST00000397827 CCDC61Q9Y6R9 512 aa23.37■■□□□ 1.33
CHRFAM7A-202ENST00000397827 USP19O94966 1318 aa23.37■■□□□ 1.33
CHRFAM7A-202ENST00000397827 RRS1Q15050 365 aaKnown RBP23.37■■□□□ 1.33
CHRFAM7A-202ENST00000397827 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
CHRFAM7A-202ENST00000397827 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
CHRFAM7A-202ENST00000397827 TNRQ92752 1358 aa23.36■■□□□ 1.33
CHRFAM7A-202ENST00000397827 IL13P35225 146 aa23.35■■□□□ 1.33
CHRFAM7A-202ENST00000397827 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
CHRFAM7A-202ENST00000397827 TMEM57Q8N5G2 664 aa23.35■■□□□ 1.33
CHRFAM7A-202ENST00000397827 CPS1P31327 1500 aa23.34■■□□□ 1.33
CHRFAM7A-202ENST00000397827 COG3Q96JB2 828 aa23.34■■□□□ 1.33
CHRFAM7A-202ENST00000397827 DDX19BQ9UMR2 479 aa23.34■■□□□ 1.33
CHRFAM7A-202ENST00000397827 NFE2L2Q16236 605 aa23.33■■□□□ 1.33
CHRFAM7A-202ENST00000397827 BRPF3Q9ULD4 1205 aa23.33■■□□□ 1.33
CHRFAM7A-202ENST00000397827 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.33
CHRFAM7A-202ENST00000397827 NUTM2FA1L443 756 aa23.32■■□□□ 1.32
CHRFAM7A-202ENST00000397827 TMEM2Q9UHN6 1383 aa23.32■■□□□ 1.32
CHRFAM7A-202ENST00000397827 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
CHRFAM7A-202ENST00000397827 TECPR2O15040 1411 aa23.3■■□□□ 1.32
CHRFAM7A-202ENST00000397827 KIF16BQ96L93 1317 aa23.3■■□□□ 1.32
CHRFAM7A-202ENST00000397827 SIRT1Q96EB6 747 aa23.29■■□□□ 1.32
CHRFAM7A-202ENST00000397827 USP35Q9P2H5 1018 aa23.29■■□□□ 1.32
CHRFAM7A-202ENST00000397827 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms