RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 XRCC6P12956 609 aaKnown RBP eCLIP6.34□□□□□ -1.39
SSR1-202ENST00000397511 CABP1Q9NZU7 370 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 DEPDC5O75140 1603 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 EFCAB6Q5THR3 1501 aa6.34□□□□□ -1.4
SSR1-202ENST00000397511 ZNF518AQ6AHZ1 1483 aa6.34□□□□□ -1.4
SSR1-202ENST00000397511 POLR3AO14802 1390 aaPredicted RBP6.33□□□□□ -1.4
SSR1-202ENST00000397511 SOX12O15370 315 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 RIPK4P57078 832 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 PDE3AQ14432 1141 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 NPC1L1Q9UHC9 1359 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 NCKAP5LQ9HCH0 1330 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 ESPNB1AK53 854 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 MFAP1P55081 439 aaKnown RBP6.33□□□□□ -1.4
SSR1-202ENST00000397511 BECN1Q14457 450 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 RNF39Q9H2S5 420 aa6.33□□□□□ -1.4
SSR1-202ENST00000397511 A0A1W2PP64 1363 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 FYB1O15117 783 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 MAP7D2Q96T17 732 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 NOB1Q9ULX3 412 aaKnown RBP6.32□□□□□ -1.4
SSR1-202ENST00000397511 TRIM27P14373 513 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 DZIP1LQ8IYY4 767 aaKnown RBP6.32□□□□□ -1.4
SSR1-202ENST00000397511 MYH16Q9H6N6 1097 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 ZRANB1Q9UGI0 708 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 QRICH2Q9H0J4 1663 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 MYOM2P54296 1465 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 USP19O94966 1318 aa6.32□□□□□ -1.4
SSR1-202ENST00000397511 FSD2A1L4K1 749 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 TMPOP42166 694 aaKnown RBP6.31□□□□□ -1.4
SSR1-202ENST00000397511 ZKSCAN2Q63HK3 967 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 CNKSR2Q8WXI2 1034 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 VWDEQ8N2E2 1590 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 ZBTB22O15209 634 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 MRE11P49959 708 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 TRIM44Q96DX7 344 aaPredicted RBP6.31□□□□□ -1.4
SSR1-202ENST00000397511 CDK19Q9BWU1 502 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 MVPQ14764 893 aaKnown RBP6.31□□□□□ -1.4
SSR1-202ENST00000397511 SAMD1Q6SPF0 538 aaPredicted RBP6.31□□□□□ -1.4
SSR1-202ENST00000397511 WDR63Q8IWG1 891 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 PMFBP1Q8TBY8 1022 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
SSR1-202ENST00000397511 TRIM35Q9UPQ4 493 aa6.31□□□□□ -1.4
SSR1-202ENST00000397511 PRKAR2BP31323 418 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 TMEM57Q8N5G2 664 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 PANK2Q9BZ23 570 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 LNPKQ9C0E8 428 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 RWDD1Q9H446 243 aaPredicted RBP6.3□□□□□ -1.4
SSR1-202ENST00000397511 UPF2Q9HAU5 1272 aaKnown RBP6.3□□□□□ -1.4
SSR1-202ENST00000397511 POGZQ7Z3K3 1410 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 YEATS2Q9ULM3 1422 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 GLI2P10070 1586 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 ANKRD36BQ8N2N9 1353 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 DIAPH1O60610 1272 aaKnown RBP6.3□□□□□ -1.4
SSR1-202ENST00000397511 DCTN1Q14203 1278 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 RRS1Q15050 365 aaKnown RBP6.3□□□□□ -1.4
SSR1-202ENST00000397511 CHMP4AQ9BY43 222 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 EMILIN1Q9Y6C2 1016 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 ADGRB3O60242 1522 aa6.3□□□□□ -1.4
SSR1-202ENST00000397511 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 TERF2IPQ9NYB0 399 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 FAM83GA6ND36 823 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 NCLP19338 710 aaKnown RBP6.29□□□□□ -1.4
SSR1-202ENST00000397511 SMAP1Q8IYB5 467 aaPredicted RBP6.29□□□□□ -1.4
SSR1-202ENST00000397511 FOXD4L1Q9NU39 408 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 SHPRHQ149N8 1683 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 ADGRB1O14514 1584 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 FRMPD1Q5SYB0 1578 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 TULP4Q9NRJ4 1543 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 HDGFL2Q7Z4V5 671 aaPredicted RBP6.29□□□□□ -1.4
SSR1-202ENST00000397511 TXNDC2Q86VQ3 553 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 PLEKHF1Q96S99 279 aa6.29□□□□□ -1.4
SSR1-202ENST00000397511 SBNO2Q9Y2G9 1366 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 SIGLEC1Q9BZZ2 1709 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 KIAA1210Q9ULL0 1709 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 APBB1O00213 710 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 FAM69CQ0P6D2 419 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 ATF7IPQ6VMQ6 1270 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 ISY1Q9ULR0 285 aaKnown RBP6.28□□□□□ -1.4
SSR1-202ENST00000397511 IFT172Q9UG01 1749 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 NME9Q86XW9 330 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 TSPYL6Q8N831 410 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 TBC1D2Q9BYX2 928 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 BCL11BQ9C0K0 894 aaPredicted RBP6.28□□□□□ -1.4
SSR1-202ENST00000397511 NRXN1Q9ULB1 1477 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 ABCC3O15438 1527 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 PPLO60437 1756 aa6.28□□□□□ -1.4
SSR1-202ENST00000397511 RPGRIP1LQ68CZ1 1315 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 NEO1Q92859 1461 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 NGEFQ8N5V2 710 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 GRPEL1Q9HAV7 217 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 CAMSAP1Q5T5Y3 1602 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 TERF1P54274 439 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 MTERF4Q7Z6M4 381 aaKnown RBP6.27□□□□□ -1.41
SSR1-202ENST00000397511 ERBB4Q15303 1308 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 ATAD2Q6PL18 1390 aa6.27□□□□□ -1.41
SSR1-202ENST00000397511 KRT24Q2M2I5 525 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 ANKRD45Q5TZF3 282 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 C22orf23Q9BZE7 217 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms