RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ARHGEF40Q8TER5 1519 aa30.65■■■□□ 2.5
PABPN1-202ENST00000397276 TXNDC2Q86VQ3 553 aa30.65■■■□□ 2.5
PABPN1-202ENST00000397276 PLEKHF1Q96S99 279 aa30.63■■■□□ 2.49
PABPN1-202ENST00000397276 MYH16Q9H6N6 1097 aa30.63■■■□□ 2.49
PABPN1-202ENST00000397276 MAPK8IP3Q9UPT6 1336 aa30.63■■■□□ 2.49
PABPN1-202ENST00000397276 DIAPH1O60610 1272 aaKnown RBP30.61■■■□□ 2.49
PABPN1-202ENST00000397276 TMPOP42166 694 aaKnown RBP30.61■■■□□ 2.49
PABPN1-202ENST00000397276 ZMYM3Q14202 1370 aa30.61■■■□□ 2.49
PABPN1-202ENST00000397276 RLBP1P12271 317 aa30.6■■■□□ 2.49
PABPN1-202ENST00000397276 NLRP1Q9C000 1473 aa30.6■■■□□ 2.49
PABPN1-202ENST00000397276 REREQ9P2R6 1566 aa30.6■■■□□ 2.49
PABPN1-202ENST00000397276 SPATA31D1Q6ZQQ2 1576 aa30.59■■■□□ 2.49
PABPN1-202ENST00000397276 NCKAP5LQ9HCH0 1330 aa30.59■■■□□ 2.49
PABPN1-202ENST00000397276 METP08581 1390 aa30.59■■■□□ 2.49
PABPN1-202ENST00000397276 TRIM35Q9UPQ4 493 aa30.57■■■□□ 2.48
PABPN1-202ENST00000397276 RIPK4P57078 832 aa30.56■■■□□ 2.48
PABPN1-202ENST00000397276 EXOSC9Q06265 439 aaKnown RBP30.54■■■□□ 2.48
PABPN1-202ENST00000397276 COL3A1P02461 1466 aaPredicted RBP30.54■■■□□ 2.48
PABPN1-202ENST00000397276 WASLO00401 505 aaPredicted RBP30.53■■■□□ 2.48
PABPN1-202ENST00000397276 FAM161AQ3B820 660 aa30.53■■■□□ 2.48
PABPN1-202ENST00000397276 ZRANB1Q9UGI0 708 aa30.53■■■□□ 2.48
PABPN1-202ENST00000397276 SLC4A3P48751 1232 aa30.52■■■□□ 2.48
PABPN1-202ENST00000397276 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.52■■■□□ 2.48
PABPN1-202ENST00000397276 POLKQ9UBT6 870 aa30.52■■■□□ 2.48
PABPN1-202ENST00000397276 C8orf34Q49A92 452 aa30.52■■■□□ 2.48
PABPN1-202ENST00000397276 NME9Q86XW9 330 aa30.5■■■□□ 2.47
PABPN1-202ENST00000397276 PLPPR3Q6T4P5 718 aa30.49■■■□□ 2.47
PABPN1-202ENST00000397276 MED14O60244 1454 aa30.49■■■□□ 2.47
PABPN1-202ENST00000397276 PRKCSHP14314 528 aaPredicted RBP30.49■■■□□ 2.47
PABPN1-202ENST00000397276 HMOX1P09601 288 aa30.49■■■□□ 2.47
PABPN1-202ENST00000397276 PCDHB15Q9Y5E8 787 aa30.49■■■□□ 2.47
PABPN1-202ENST00000397276 EMILIN1Q9Y6C2 1016 aa30.49■■■□□ 2.47
PABPN1-202ENST00000397276 ADGRB2O60241 1585 aa30.48■■■□□ 2.47
PABPN1-202ENST00000397276 NUDT16Q96DE0 195 aaKnown RBP30.48■■■□□ 2.47
PABPN1-202ENST00000397276 NCBP3Q53F19 620 aaKnown RBP30.47■■■□□ 2.47
PABPN1-202ENST00000397276 SMC4Q9NTJ3 1288 aa30.47■■■□□ 2.47
PABPN1-202ENST00000397276 PRKAR2BP31323 418 aa30.46■■■□□ 2.47
PABPN1-202ENST00000397276 PPIP5K1Q6PFW1 1433 aa30.46■■■□□ 2.47
PABPN1-202ENST00000397276 PNPLA6Q8IY17 1366 aa30.46■■■□□ 2.47
PABPN1-202ENST00000397276 DLC1Q96QB1 1528 aa30.45■■■□□ 2.47
PABPN1-202ENST00000397276 FTSJ3Q8IY81 847 aaKnown RBP30.44■■■□□ 2.46
PABPN1-202ENST00000397276 USP35Q9P2H5 1018 aa30.44■■■□□ 2.46
PABPN1-202ENST00000397276 NUTM2FA1L443 756 aa30.44■■■□□ 2.46
PABPN1-202ENST00000397276 HDGFP51858 240 aaKnown RBP30.43■■■□□ 2.46
PABPN1-202ENST00000397276 ZKSCAN2Q63HK3 967 aa30.43■■■□□ 2.46
PABPN1-202ENST00000397276 SSH1Q8WYL5 1049 aa30.43■■■□□ 2.46
PABPN1-202ENST00000397276 TNRQ92752 1358 aa30.42■■■□□ 2.46
PABPN1-202ENST00000397276 ANKRD26Q9UPS8 1709 aa30.42■■■□□ 2.46
PABPN1-202ENST00000397276 FCHSD2O94868 740 aa30.42■■■□□ 2.46
PABPN1-202ENST00000397276 SETD1AO15047 1707 aaKnown RBP30.41■■■□□ 2.46
PABPN1-202ENST00000397276 CEBPAP49715 358 aaPredicted RBP30.41■■■□□ 2.46
PABPN1-202ENST00000397276 PNNQ9H307 717 aaKnown RBP30.41■■■□□ 2.46
PABPN1-202ENST00000397276 ATP7BP35670 1465 aa30.41■■■□□ 2.46
PABPN1-202ENST00000397276 RRS1Q15050 365 aaKnown RBP30.4■■■□□ 2.46
PABPN1-202ENST00000397276 PHACTR3Q96KR7 559 aa30.4■■■□□ 2.46
PABPN1-202ENST00000397276 NRXN3Q9Y4C0 1643 aa30.4■■■□□ 2.46
PABPN1-202ENST00000397276 DZIP1LQ8IYY4 767 aaKnown RBP30.4■■■□□ 2.46
PABPN1-202ENST00000397276 RSPH6AQ9H0K4 717 aa30.4■■■□□ 2.46
PABPN1-202ENST00000397276 CCDC61Q9Y6R9 512 aa30.4■■■□□ 2.46
PABPN1-202ENST00000397276 KIF13AQ9H1H9 1805 aa30.39■■■□□ 2.46
PABPN1-202ENST00000397276 PMFBP1Q8TBY8 1022 aa30.38■■■□□ 2.45
PABPN1-202ENST00000397276 MVPQ14764 893 aaKnown RBP30.38■■■□□ 2.45
PABPN1-202ENST00000397276 KIF20BQ96Q89 1820 aa30.38■■■□□ 2.45
PABPN1-202ENST00000397276 THUMPD2Q9BTF0 503 aaKnown RBP30.37■■■□□ 2.45
PABPN1-202ENST00000397276 TRIM27P14373 513 aa30.36■■■□□ 2.45
PABPN1-202ENST00000397276 BRPF3Q9ULD4 1205 aa30.36■■■□□ 2.45
PABPN1-202ENST00000397276 COG3Q96JB2 828 aa30.36■■■□□ 2.45
PABPN1-202ENST00000397276 CPSF1Q10570 1443 aaKnown RBP30.36■■■□□ 2.45
PABPN1-202ENST00000397276 DDRGK1Q96HY6 314 aa30.35■■■□□ 2.45
PABPN1-202ENST00000397276 NOB1Q9ULX3 412 aaKnown RBP30.35■■■□□ 2.45
PABPN1-202ENST00000397276 TMEM2Q9UHN6 1383 aa30.34■■■□□ 2.45
PABPN1-202ENST00000397276 CT47B1P0C2W7 299 aaPredicted RBP30.34■■■□□ 2.45
PABPN1-202ENST00000397276 EDC4Q6P2E9 1401 aaKnown RBP30.34■■■□□ 2.45
PABPN1-202ENST00000397276 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.34■■■□□ 2.45
PABPN1-202ENST00000397276 LTKP29376 864 aa30.33■■■□□ 2.45
PABPN1-202ENST00000397276 ITPRIPQ8IWB1 547 aa30.33■■■□□ 2.45
PABPN1-202ENST00000397276 SLC26A8Q96RN1 970 aa30.33■■■□□ 2.45
PABPN1-202ENST00000397276 IL16Q14005 1332 aa30.33■■■□□ 2.45
PABPN1-202ENST00000397276 PRR36Q9H6K5 1346 aa30.33■■■□□ 2.45
PABPN1-202ENST00000397276 NFKBIBQ15653 356 aa30.32■■■□□ 2.44
PABPN1-202ENST00000397276 LRRC7Q96NW7 1537 aa30.32■■■□□ 2.44
PABPN1-202ENST00000397276 ROBO2Q9HCK4 1378 aa30.31■■■□□ 2.44
PABPN1-202ENST00000397276 IL13P35225 146 aa30.31■■■□□ 2.44
PABPN1-202ENST00000397276 RWDD1Q9H446 243 aaPredicted RBP30.3■■■□□ 2.44
PABPN1-202ENST00000397276 PDZRN3Q9UPQ7 1066 aa30.3■■■□□ 2.44
PABPN1-202ENST00000397276 ATF7IPQ6VMQ6 1270 aa30.3■■■□□ 2.44
PABPN1-202ENST00000397276 AAMPQ13685 434 aa30.29■■■□□ 2.44
PABPN1-202ENST00000397276 MAP2P11137 1827 aaKnown RBP30.28■■■□□ 2.44
PABPN1-202ENST00000397276 CPS1P31327 1500 aa30.28■■■□□ 2.44
PABPN1-202ENST00000397276 NFE2L2Q16236 605 aa30.27■■■□□ 2.44
PABPN1-202ENST00000397276 DAXXQ9UER7 740 aaPredicted RBP30.27■■■□□ 2.44
PABPN1-202ENST00000397276 FAM135BQ49AJ0 1406 aa30.27■■■□□ 2.44
PABPN1-202ENST00000397276 SEC24BO95487 1268 aa30.27■■■□□ 2.44
PABPN1-202ENST00000397276 ELL2O00472 640 aaPredicted RBP30.26■■■□□ 2.44
PABPN1-202ENST00000397276 GSE1Q14687 1217 aa30.26■■■□□ 2.43
PABPN1-202ENST00000397276 TMEM57Q8N5G2 664 aa30.25■■■□□ 2.43
PABPN1-202ENST00000397276 SIRT1Q96EB6 747 aa30.25■■■□□ 2.43
PABPN1-202ENST00000397276 SOX12O15370 315 aa30.25■■■□□ 2.43
PABPN1-202ENST00000397276 ZNF692Q9BU19 519 aaPredicted RBP30.23■■■□□ 2.43
PABPN1-202ENST00000397276 TECPR2O15040 1411 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms