RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 ANKARQ7Z5J8 1434 aa22.37■■□□□ 1.17
RDH13-202ENST00000396247 CDCA7LQ96GN5 454 aa22.36■■□□□ 1.17
RDH13-202ENST00000396247 COG3Q96JB2 828 aa22.36■■□□□ 1.17
RDH13-202ENST00000396247 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
RDH13-202ENST00000396247 USP6P35125 1406 aa22.35■■□□□ 1.17
RDH13-202ENST00000396247 NGEFQ8N5V2 710 aa22.35■■□□□ 1.17
RDH13-202ENST00000396247 NRKQ7Z2Y5 1582 aa22.35■■□□□ 1.17
RDH13-202ENST00000396247 TTC21BQ7Z4L5 1316 aa22.34■■□□□ 1.17
RDH13-202ENST00000396247 ZNF521Q96K83 1311 aa22.34■■□□□ 1.17
RDH13-202ENST00000396247 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
RDH13-202ENST00000396247 FMN2Q9NZ56 1722 aa22.34■■□□□ 1.17
RDH13-202ENST00000396247 PNPLA6Q8IY17 1366 aa22.33■■□□□ 1.17
RDH13-202ENST00000396247 PMFBP1Q8TBY8 1022 aa22.33■■□□□ 1.17
RDH13-202ENST00000396247 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
RDH13-202ENST00000396247 U2AF1L5P0DN76 240 aaPredicted RBP22.32■■□□□ 1.16
RDH13-202ENST00000396247 U2AF1Q01081 240 aaKnown RBP eCLIP22.32■■□□□ 1.16
RDH13-202ENST00000396247 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
RDH13-202ENST00000396247 NALCNQ8IZF0 1738 aa22.32■■□□□ 1.16
RDH13-202ENST00000396247 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
RDH13-202ENST00000396247 AATKQ6ZMQ8 1374 aa22.32■■□□□ 1.16
RDH13-202ENST00000396247 RGPD8O14715 1765 aaPredicted RBP22.31■■□□□ 1.16
RDH13-202ENST00000396247 NGDNQ8NEJ9 315 aaKnown RBP22.31■■□□□ 1.16
RDH13-202ENST00000396247 DIAPH1O60610 1272 aaKnown RBP22.3■■□□□ 1.16
RDH13-202ENST00000396247 FBLN1P23142 703 aa22.3■■□□□ 1.16
RDH13-202ENST00000396247 GOLGA2Q08379 1002 aa22.3■■□□□ 1.16
RDH13-202ENST00000396247 SSH2Q76I76 1423 aa22.3■■□□□ 1.16
RDH13-202ENST00000396247 ADGRL3Q9HAR2 1447 aa22.3■■□□□ 1.16
RDH13-202ENST00000396247 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
RDH13-202ENST00000396247 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
RDH13-202ENST00000396247 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
RDH13-202ENST00000396247 MAP2P11137 1827 aaKnown RBP22.28■■□□□ 1.16
RDH13-202ENST00000396247 U2SURPO15042 1029 aaKnown RBP22.28■■□□□ 1.16
RDH13-202ENST00000396247 PPM1GO15355 546 aaPredicted RBP22.28■■□□□ 1.16
RDH13-202ENST00000396247 ERICH6BQ5W0A0 696 aa22.28■■□□□ 1.16
RDH13-202ENST00000396247 TTC21AQ8NDW8 1320 aa22.28■■□□□ 1.16
RDH13-202ENST00000396247 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.15
RDH13-202ENST00000396247 OVOS2A0A0J9YW53 1432 aa22.26■■□□□ 1.15
RDH13-202ENST00000396247 OVOS2Q6IE36 1432 aa22.26■■□□□ 1.15
RDH13-202ENST00000396247 TCP11L2Q8N4U5 519 aa22.26■■□□□ 1.15
RDH13-202ENST00000396247 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
RDH13-202ENST00000396247 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
RDH13-202ENST00000396247 EMILIN1Q9Y6C2 1016 aa22.26■■□□□ 1.15
RDH13-202ENST00000396247 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
RDH13-202ENST00000396247 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
RDH13-202ENST00000396247 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
RDH13-202ENST00000396247 SLFN5Q08AF3 891 aa22.23■■□□□ 1.15
RDH13-202ENST00000396247 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
RDH13-202ENST00000396247 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
RDH13-202ENST00000396247 RRS1Q15050 365 aaKnown RBP22.21■■□□□ 1.15
RDH13-202ENST00000396247 PROSER2Q86WR7 435 aaPredicted RBP22.21■■□□□ 1.15
RDH13-202ENST00000396247 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
RDH13-202ENST00000396247 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
RDH13-202ENST00000396247 PHF8Q9UPP1 1060 aa22.21■■□□□ 1.15
RDH13-202ENST00000396247 RRP7AQ9Y3A4 280 aaKnown RBP22.21■■□□□ 1.15
RDH13-202ENST00000396247 HSPA2P54652 639 aa22.2■■□□□ 1.14
RDH13-202ENST00000396247 PLEKHF1Q96S99 279 aa22.2■■□□□ 1.14
RDH13-202ENST00000396247 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.14
RDH13-202ENST00000396247 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
RDH13-202ENST00000396247 E9PSI1 815 aa22.19■■□□□ 1.14
RDH13-202ENST00000396247 TRMT2AQ8IZ69 625 aaKnown RBP22.19■■□□□ 1.14
RDH13-202ENST00000396247 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
RDH13-202ENST00000396247 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
RDH13-202ENST00000396247 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
RDH13-202ENST00000396247 SPINK5Q9NQ38 1064 aaPredicted RBP22.18■■□□□ 1.14
RDH13-202ENST00000396247 FCHSD2O94868 740 aa22.17■■□□□ 1.14
RDH13-202ENST00000396247 IL13P35225 146 aa22.17■■□□□ 1.14
RDH13-202ENST00000396247 RRP1P56182 461 aaKnown RBP22.17■■□□□ 1.14
RDH13-202ENST00000396247 DMRT2Q9Y5R5 561 aa22.16■■□□□ 1.14
RDH13-202ENST00000396247 PIK3C2AO00443 1686 aa22.15■■□□□ 1.14
RDH13-202ENST00000396247 ESCO1Q5FWF5 840 aa22.15■■□□□ 1.14
RDH13-202ENST00000396247 WDR63Q8IWG1 891 aa22.14■■□□□ 1.14
RDH13-202ENST00000396247 PPP4R2Q9NY27 417 aa22.14■■□□□ 1.14
RDH13-202ENST00000396247 LMTK3Q96Q04 1460 aa22.14■■□□□ 1.13
RDH13-202ENST00000396247 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
RDH13-202ENST00000396247 LRRC7Q96NW7 1537 aa22.13■■□□□ 1.13
RDH13-202ENST00000396247 TMPOP42166 694 aaKnown RBP22.12■■□□□ 1.13
RDH13-202ENST00000396247 NLRP6P59044 892 aa22.12■■□□□ 1.13
RDH13-202ENST00000396247 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
RDH13-202ENST00000396247 SOX12O15370 315 aa22.11■■□□□ 1.13
RDH13-202ENST00000396247 PAK3O75914 559 aaPredicted RBP22.11■■□□□ 1.13
RDH13-202ENST00000396247 NEFMP07197 916 aa22.1■■□□□ 1.13
RDH13-202ENST00000396247 PRKAR2BP31323 418 aa22.1■■□□□ 1.13
RDH13-202ENST00000396247 ABTB2Q8N961 1025 aa22.1■■□□□ 1.13
RDH13-202ENST00000396247 HMOX1P09601 288 aa22.09■■□□□ 1.13
RDH13-202ENST00000396247 PSME1Q06323 249 aa22.09■■□□□ 1.13
RDH13-202ENST00000396247 TMEM94Q12767 1356 aa22.09■■□□□ 1.13
RDH13-202ENST00000396247 STRCP1A6NGW2 1772 aa22.09■■□□□ 1.13
RDH13-202ENST00000396247 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
RDH13-202ENST00000396247 USP54Q70EL1 1684 aa22.08■■□□□ 1.13
RDH13-202ENST00000396247 PEAK1Q9H792 1746 aa22.08■■□□□ 1.13
RDH13-202ENST00000396247 ORAI2Q96SN7 254 aa22.08■■□□□ 1.12
RDH13-202ENST00000396247 NCOA3Q9Y6Q9 1424 aa22.08■■□□□ 1.12
RDH13-202ENST00000396247 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
RDH13-202ENST00000396247 NUTM2GQ5VZR2 741 aa22.07■■□□□ 1.12
RDH13-202ENST00000396247 RIPK4P57078 832 aa22.07■■□□□ 1.12
RDH13-202ENST00000396247 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
RDH13-202ENST00000396247 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
RDH13-202ENST00000396247 FANCIQ9NVI1 1328 aa22.06■■□□□ 1.12
RDH13-202ENST00000396247 TRIM35Q9UPQ4 493 aa22.06■■□□□ 1.12
RDH13-202ENST00000396247 MARF1Q9Y4F3 1742 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms