RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 TOPAZ1Q8N9V7 1692 aa14.05□□□□□ -0.16
THUMPD1-202ENST00000396083 KTN1Q86UP2 1357 aaKnown RBP14.04□□□□□ -0.16
THUMPD1-202ENST00000396083 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
THUMPD1-202ENST00000396083 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 NLRP6P59044 892 aa14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 EP400Q96L91 3159 aa14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 A0A1W2PP64 1363 aa14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 ZC3H6P61129 1189 aaKnown RBP14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 NGLY1Q96IV0 654 aa14.03□□□□□ -0.16
THUMPD1-202ENST00000396083 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.16
THUMPD1-202ENST00000396083 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.16
THUMPD1-202ENST00000396083 USP6P35125 1406 aa14.02□□□□□ -0.17
THUMPD1-202ENST00000396083 NME9Q86XW9 330 aa14.02□□□□□ -0.17
THUMPD1-202ENST00000396083 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
THUMPD1-202ENST00000396083 CHRNA2Q15822 529 aa14.01□□□□□ -0.17
THUMPD1-202ENST00000396083 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
THUMPD1-202ENST00000396083 SHPRHQ149N8 1683 aa14□□□□□ -0.17
THUMPD1-202ENST00000396083 FBLN1P23142 703 aa14□□□□□ -0.17
THUMPD1-202ENST00000396083 TTC21BQ7Z4L5 1316 aa14□□□□□ -0.17
THUMPD1-202ENST00000396083 TRPM3Q9HCF6 1732 aaPredicted RBP13.99□□□□□ -0.17
THUMPD1-202ENST00000396083 CD163L1Q9NR16 1453 aa13.99□□□□□ -0.17
THUMPD1-202ENST00000396083 SBNO1A3KN83 1393 aa13.99□□□□□ -0.17
THUMPD1-202ENST00000396083 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
THUMPD1-202ENST00000396083 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
THUMPD1-202ENST00000396083 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
THUMPD1-202ENST00000396083 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
THUMPD1-202ENST00000396083 RGS17Q9UGC6 210 aaPredicted RBP13.98□□□□□ -0.17
THUMPD1-202ENST00000396083 AFF2P51816 1311 aa13.98□□□□□ -0.17
THUMPD1-202ENST00000396083 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
THUMPD1-202ENST00000396083 GGNBP2Q9H3C7 697 aa13.97□□□□□ -0.17
THUMPD1-202ENST00000396083 NLRP13Q86W25 1043 aa13.96□□□□□ -0.17
THUMPD1-202ENST00000396083 CARD14Q9BXL6 1004 aa13.96□□□□□ -0.17
THUMPD1-202ENST00000396083 PANK3Q9H999 370 aa13.96□□□□□ -0.17
THUMPD1-202ENST00000396083 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
THUMPD1-202ENST00000396083 ALS2Q96Q42 1657 aa13.96□□□□□ -0.17
THUMPD1-202ENST00000396083 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
THUMPD1-202ENST00000396083 GCP02774 474 aa13.95□□□□□ -0.18
THUMPD1-202ENST00000396083 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
THUMPD1-202ENST00000396083 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
THUMPD1-202ENST00000396083 AKAP12Q02952 1782 aa13.95□□□□□ -0.18
THUMPD1-202ENST00000396083 TNNT2P45379 298 aaPredicted RBP13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 USP21Q9UK80 565 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 KIAA0232Q92628 1395 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 MYT1Q01538 1121 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 CCDC9Q9Y3X0 531 aaKnown RBP13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 ANKRD36BQ8N2N9 1353 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 BTG4Q9NY30 223 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
THUMPD1-202ENST00000396083 MYOM1P52179 1685 aa13.93□□□□□ -0.18
THUMPD1-202ENST00000396083 PIK3C2AO00443 1686 aa13.93□□□□□ -0.18
THUMPD1-202ENST00000396083 SSH2Q76I76 1423 aa13.93□□□□□ -0.18
THUMPD1-202ENST00000396083 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
THUMPD1-202ENST00000396083 MON2Q7Z3U7 1717 aa13.92□□□□□ -0.18
THUMPD1-202ENST00000396083 EDC4Q6P2E9 1401 aaKnown RBP13.92□□□□□ -0.18
THUMPD1-202ENST00000396083 COL22A1Q8NFW1 1626 aaPredicted RBP13.91□□□□□ -0.18
THUMPD1-202ENST00000396083 FYB1O15117 783 aa13.91□□□□□ -0.18
THUMPD1-202ENST00000396083 QTRT2Q9H974 415 aaKnown RBP13.91□□□□□ -0.18
THUMPD1-202ENST00000396083 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
THUMPD1-202ENST00000396083 NINLQ9Y2I6 1382 aa13.9□□□□□ -0.18
THUMPD1-202ENST00000396083 COG3Q96JB2 828 aa13.9□□□□□ -0.18
THUMPD1-202ENST00000396083 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
THUMPD1-202ENST00000396083 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
THUMPD1-202ENST00000396083 NRKQ7Z2Y5 1582 aa13.89□□□□□ -0.19
THUMPD1-202ENST00000396083 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
THUMPD1-202ENST00000396083 RRS1Q15050 365 aaKnown RBP13.89□□□□□ -0.19
THUMPD1-202ENST00000396083 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
THUMPD1-202ENST00000396083 A0A0G2JS52 829 aa13.89□□□□□ -0.19
THUMPD1-202ENST00000396083 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
THUMPD1-202ENST00000396083 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
THUMPD1-202ENST00000396083 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
THUMPD1-202ENST00000396083 USP19O94966 1318 aa13.88□□□□□ -0.19
THUMPD1-202ENST00000396083 LTV1Q96GA3 475 aaPredicted RBP13.87□□□□□ -0.19
THUMPD1-202ENST00000396083 PHRF1Q9P1Y6 1649 aaKnown RBP13.87□□□□□ -0.19
THUMPD1-202ENST00000396083 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
THUMPD1-202ENST00000396083 EVA1CP58658 441 aa13.87□□□□□ -0.19
THUMPD1-202ENST00000396083 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
THUMPD1-202ENST00000396083 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
THUMPD1-202ENST00000396083 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
THUMPD1-202ENST00000396083 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
THUMPD1-202ENST00000396083 CRYBG1Q9Y4K1 1723 aa13.86□□□□□ -0.19
THUMPD1-202ENST00000396083 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
THUMPD1-202ENST00000396083 UNC5CLQ8IV45 518 aa13.86□□□□□ -0.19
THUMPD1-202ENST00000396083 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
THUMPD1-202ENST00000396083 RXRBP28702 533 aa13.84□□□□□ -0.19
THUMPD1-202ENST00000396083 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
THUMPD1-202ENST00000396083 CSB-PGBD3P0DP91 1061 aa13.84□□□□□ -0.19
THUMPD1-202ENST00000396083 LARP1Q6PKG0 1096 aaKnown RBP13.84□□□□□ -0.19
THUMPD1-202ENST00000396083 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
THUMPD1-202ENST00000396083 ARHGEF25Q86VW2 580 aa13.83□□□□□ -0.19
THUMPD1-202ENST00000396083 OVOS2A0A0J9YW53 1432 aa13.83□□□□□ -0.2
THUMPD1-202ENST00000396083 OVOS2Q6IE36 1432 aa13.83□□□□□ -0.2
THUMPD1-202ENST00000396083 EMILIN1Q9Y6C2 1016 aa13.83□□□□□ -0.2
THUMPD1-202ENST00000396083 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
THUMPD1-202ENST00000396083 AMPHP49418 695 aa13.82□□□□□ -0.2
THUMPD1-202ENST00000396083 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
THUMPD1-202ENST00000396083 SLIT2O94813 1529 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms