RNA–Protein interactions for RNA: ENST00000395813.5

CAST-207, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-207ENST00000395813 MKRN4PQ13434 485 aaPredicted RBP6.1□□□□□ -1.43
CAST-207ENST00000395813 CCDC102AQ96A19 550 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 DMGDHQ9UI17 866 aaKnown RBP6.1□□□□□ -1.43
CAST-207ENST00000395813 SCP2P22307 547 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 TAGLNQ01995 201 aaKnown RBP6.1□□□□□ -1.43
CAST-207ENST00000395813 SKAP1Q86WV1 359 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 CEP120Q8N960 986 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 SPACA7Q96KW9 195 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 NOP58Q9Y2X3 529 aaKnown RBP6.1□□□□□ -1.43
CAST-207ENST00000395813 TOMM20Q15388 145 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 OTUD6BQ8N6M0 293 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 SNRKQ9NRH2 765 aa6.1□□□□□ -1.43
CAST-207ENST00000395813 PRC1O43663 620 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 FOSP01100 380 aaPredicted RBP6.09□□□□□ -1.43
CAST-207ENST00000395813 CSPP1Q1MSJ5 1256 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
CAST-207ENST00000395813 ARHGEF10LQ9HCE6 1279 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 BDNFP23560 247 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 NBPF9Q3BBW0 867 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 MEX3CQ5U5Q3 659 aaKnown RBP6.09□□□□□ -1.43
CAST-207ENST00000395813 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.09□□□□□ -1.43
CAST-207ENST00000395813 CFAP53Q96M91 514 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 RSPH9Q9H1X1 276 aaPredicted RBP6.09□□□□□ -1.43
CAST-207ENST00000395813 DIS3Q9Y2L1 958 aaKnown RBP6.09□□□□□ -1.43
CAST-207ENST00000395813 PROM2Q8N271 834 aa6.09□□□□□ -1.43
CAST-207ENST00000395813 ANKRD33BA6NCL7 494 aa6.09□□□□□ -1.44
CAST-207ENST00000395813 EIF3JO75822 258 aaKnown RBP6.09□□□□□ -1.44
CAST-207ENST00000395813 KIAA2012Q0VF49 1180 aa6.09□□□□□ -1.44
CAST-207ENST00000395813 ODR4Q5SWX8 454 aa6.09□□□□□ -1.44
CAST-207ENST00000395813 ZNF467Q7Z7K2 595 aaPredicted RBP6.09□□□□□ -1.44
CAST-207ENST00000395813 DDX27Q96GQ7 796 aaKnown RBP6.09□□□□□ -1.44
CAST-207ENST00000395813 CCDC92Q53HC0 331 aaPredicted RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 RPGRIP1LQ68CZ1 1315 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 CD53P19397 219 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 HNRNPUL2Q1KMD3 747 aaKnown RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 HDGFL1Q5TGJ6 251 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 NBPF6Q5VWK0 638 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 ICE2Q659A1 982 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 SLC4A10Q6U841 1118 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 NBPF5PQ86XG9 351 aaPredicted RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 NBPF4Q96M43 638 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 TSPAN18Q96SJ8 248 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 NUB1Q9Y5A7 615 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 LDHAP00338 332 aaKnown RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 ANP32AP39687 249 aaKnown RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 RGS3P49796 1198 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 MFSD4BQ5TF39 518 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 FNBP4Q8N3X1 1017 aaPredicted RBP6.08□□□□□ -1.44
CAST-207ENST00000395813 SPC25Q9HBM1 224 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 IGSF5Q9NSI5 407 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 SWAP70Q9UH65 585 aa6.08□□□□□ -1.44
CAST-207ENST00000395813 HMMRO75330 724 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 ABL1P00519 1130 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 RRM1P23921 792 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 PPM1FP49593 454 aaPredicted RBP6.07□□□□□ -1.44
CAST-207ENST00000395813 TBX4P57082 545 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 CHCHD4Q8N4Q1 142 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 KCNB2Q92953 911 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 CCSER2Q9H7U1 834 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 GOLGB1Q14789 3259 aaKnown RBP6.07□□□□□ -1.44
CAST-207ENST00000395813 LARP6Q9BRS8 491 aaKnown RBP6.07□□□□□ -1.44
CAST-207ENST00000395813 KLF15Q9UIH9 416 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
CAST-207ENST00000395813 ACRBPQ8NEB7 543 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 TBC1D2Q9BYX2 928 aa6.07□□□□□ -1.44
CAST-207ENST00000395813 SUDS3Q9H7L9 328 aaPredicted RBP6.07□□□□□ -1.44
CAST-207ENST00000395813 PPFIA3O75145 1194 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 ATICP31939 592 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 BANK1Q8NDB2 785 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 PNISRQ8TF01 805 aaKnown RBP6.06□□□□□ -1.44
CAST-207ENST00000395813 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 INTUQ9ULD6 942 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 CLEC4GQ6UXB4 293 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 ATRIPQ8WXE1 791 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 PUS10Q3MIT2 529 aaKnown RBP6.06□□□□□ -1.44
CAST-207ENST00000395813 LCA5Q86VQ0 697 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 SDR16C5Q8N3Y7 309 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 TSC1Q92574 1164 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 RSF1Q96T23 1441 aaPredicted RBP6.06□□□□□ -1.44
CAST-207ENST00000395813 TLDC2A0PJX2 215 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 SERPINB4P48594 390 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 NEXNQ0ZGT2 675 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 NOP9Q86U38 636 aaKnown RBP6.06□□□□□ -1.44
CAST-207ENST00000395813 TXNDC2Q86VQ3 553 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 LARGE2Q8N3Y3 721 aa6.06□□□□□ -1.44
CAST-207ENST00000395813 EVLQ9UI08 416 aaPredicted RBP6.06□□□□□ -1.44
CAST-207ENST00000395813 TSPY2A6NKD2 308 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 TSPY3P0CV98 308 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 TSPY8P0CW00 308 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 GYS2P54840 703 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 TSPY1Q01534 308 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 POU5F1Q01860 360 aaKnown RBP6.05□□□□□ -1.44
CAST-207ENST00000395813 C10orf62Q5T681 223 aaPredicted RBP6.05□□□□□ -1.44
CAST-207ENST00000395813 CCDC47Q96A33 483 aaKnown RBP6.05□□□□□ -1.44
CAST-207ENST00000395813 ZNF830Q96NB3 372 aaPredicted RBP6.05□□□□□ -1.44
CAST-207ENST00000395813 TRIM29Q14134 588 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 TCEAL1Q15170 157 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 SYCP2LQ5T4T6 812 aa6.05□□□□□ -1.44
CAST-207ENST00000395813 B4GALNT3Q6L9W6 998 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms