RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
NR1H3-201ENST00000395397 ATP7BP35670 1465 aa17.45■□□□□ 0.38
NR1H3-201ENST00000395397 BCAR3O75815 825 aa17.44■□□□□ 0.38
NR1H3-201ENST00000395397 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
NR1H3-201ENST00000395397 PNNQ9H307 717 aaKnown RBP17.44■□□□□ 0.38
NR1H3-201ENST00000395397 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
NR1H3-201ENST00000395397 IL16Q14005 1332 aa17.43■□□□□ 0.38
NR1H3-201ENST00000395397 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
NR1H3-201ENST00000395397 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
NR1H3-201ENST00000395397 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
NR1H3-201ENST00000395397 FAM135BQ49AJ0 1406 aa17.42■□□□□ 0.38
NR1H3-201ENST00000395397 MINK1Q8N4C8 1332 aaPredicted RBP17.42■□□□□ 0.38
NR1H3-201ENST00000395397 TECPR2O15040 1411 aa17.41■□□□□ 0.38
NR1H3-201ENST00000395397 HSPA1LP34931 641 aa17.41■□□□□ 0.38
NR1H3-201ENST00000395397 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
NR1H3-201ENST00000395397 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
NR1H3-201ENST00000395397 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
NR1H3-201ENST00000395397 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
NR1H3-201ENST00000395397 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.38
NR1H3-201ENST00000395397 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
NR1H3-201ENST00000395397 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
NR1H3-201ENST00000395397 GGNBP2Q9H3C7 697 aa17.38■□□□□ 0.37
NR1H3-201ENST00000395397 CABP1Q9NZU7 370 aa17.38■□□□□ 0.37
NR1H3-201ENST00000395397 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
NR1H3-201ENST00000395397 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
NR1H3-201ENST00000395397 FCHSD2O94868 740 aa17.37■□□□□ 0.37
NR1H3-201ENST00000395397 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
NR1H3-201ENST00000395397 KNDC1Q76NI1 1749 aa17.36■□□□□ 0.37
NR1H3-201ENST00000395397 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
NR1H3-201ENST00000395397 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
NR1H3-201ENST00000395397 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
NR1H3-201ENST00000395397 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-201ENST00000395397 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
NR1H3-201ENST00000395397 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
NR1H3-201ENST00000395397 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
NR1H3-201ENST00000395397 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
NR1H3-201ENST00000395397 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
NR1H3-201ENST00000395397 NEUROD2Q15784 382 aa17.33■□□□□ 0.37
NR1H3-201ENST00000395397 TOM1O60784 492 aa17.32■□□□□ 0.36
NR1H3-201ENST00000395397 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
NR1H3-201ENST00000395397 TNRQ92752 1358 aa17.32■□□□□ 0.36
NR1H3-201ENST00000395397 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 CPS1P31327 1500 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 METP08581 1390 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
NR1H3-201ENST00000395397 POLKQ9UBT6 870 aa17.31■□□□□ 0.36
NR1H3-201ENST00000395397 TMEM2Q9UHN6 1383 aa17.3■□□□□ 0.36
NR1H3-201ENST00000395397 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-201ENST00000395397 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
NR1H3-201ENST00000395397 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
NR1H3-201ENST00000395397 IGHDP01880 384 aa17.29■□□□□ 0.36
NR1H3-201ENST00000395397 C8orf34Q49A92 452 aa17.29■□□□□ 0.36
NR1H3-201ENST00000395397 ZNF142P52746 1687 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-201ENST00000395397 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
NR1H3-201ENST00000395397 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
NR1H3-201ENST00000395397 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
NR1H3-201ENST00000395397 PPIP5K1Q6PFW1 1433 aa17.28■□□□□ 0.36
NR1H3-201ENST00000395397 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
NR1H3-201ENST00000395397 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
NR1H3-201ENST00000395397 CEP170BQ9Y4F5 1589 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-201ENST00000395397 UBR1Q8IWV7 1749 aa17.26■□□□□ 0.35
NR1H3-201ENST00000395397 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-201ENST00000395397 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
NR1H3-201ENST00000395397 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
NR1H3-201ENST00000395397 PLEKHG1Q9ULL1 1385 aa17.25■□□□□ 0.35
NR1H3-201ENST00000395397 RIPK4P57078 832 aa17.25■□□□□ 0.35
NR1H3-201ENST00000395397 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
NR1H3-201ENST00000395397 ALDH1L2Q3SY69 923 aa17.25■□□□□ 0.35
NR1H3-201ENST00000395397 ADAMTS13Q76LX8 1427 aa17.24■□□□□ 0.35
NR1H3-201ENST00000395397 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
NR1H3-201ENST00000395397 RLBP1P12271 317 aa17.24■□□□□ 0.35
NR1H3-201ENST00000395397 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
NR1H3-201ENST00000395397 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-201ENST00000395397 IL13P35225 146 aa17.23■□□□□ 0.35
NR1H3-201ENST00000395397 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
NR1H3-201ENST00000395397 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-201ENST00000395397 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
NR1H3-201ENST00000395397 EXOSC9Q06265 439 aaKnown RBP17.22■□□□□ 0.35
NR1H3-201ENST00000395397 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
NR1H3-201ENST00000395397 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
NR1H3-201ENST00000395397 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
NR1H3-201ENST00000395397 NEFMP07197 916 aa17.21■□□□□ 0.35
NR1H3-201ENST00000395397 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
NR1H3-201ENST00000395397 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.35
NR1H3-201ENST00000395397 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.34
NR1H3-201ENST00000395397 NFE2L2Q16236 605 aa17.21■□□□□ 0.34
NR1H3-201ENST00000395397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
NR1H3-201ENST00000395397 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
NR1H3-201ENST00000395397 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
NR1H3-201ENST00000395397 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
NR1H3-201ENST00000395397 ATF7IPQ6VMQ6 1270 aa17.19■□□□□ 0.34
NR1H3-201ENST00000395397 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
NR1H3-201ENST00000395397 COG3Q96JB2 828 aa17.19■□□□□ 0.34
NR1H3-201ENST00000395397 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
NR1H3-201ENST00000395397 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
NR1H3-201ENST00000395397 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
NR1H3-201ENST00000395397 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms