RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 COG3Q96JB2 828 aa13.27□□□□□ -0.29
BBS4-202ENST00000395205 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
BBS4-202ENST00000395205 USP32Q8NFA0 1604 aa13.27□□□□□ -0.29
BBS4-202ENST00000395205 USP6P35125 1406 aa13.27□□□□□ -0.29
BBS4-202ENST00000395205 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
BBS4-202ENST00000395205 MTHFSP49914 203 aa13.25□□□□□ -0.29
BBS4-202ENST00000395205 FMN2Q9NZ56 1722 aa13.25□□□□□ -0.29
BBS4-202ENST00000395205 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
BBS4-202ENST00000395205 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
BBS4-202ENST00000395205 FOXO3O43524 673 aa13.24□□□□□ -0.29
BBS4-202ENST00000395205 LRRC7Q96NW7 1537 aa13.24□□□□□ -0.29
BBS4-202ENST00000395205 HNRNPUQ00839 825 aaKnown RBP eCLIP13.24□□□□□ -0.29
BBS4-202ENST00000395205 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
BBS4-202ENST00000395205 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
BBS4-202ENST00000395205 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
BBS4-202ENST00000395205 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
BBS4-202ENST00000395205 DCCP43146 1447 aa13.23□□□□□ -0.29
BBS4-202ENST00000395205 FBLN1P23142 703 aa13.22□□□□□ -0.29
BBS4-202ENST00000395205 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
BBS4-202ENST00000395205 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
BBS4-202ENST00000395205 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
BBS4-202ENST00000395205 NLRP6P59044 892 aa13.21□□□□□ -0.29
BBS4-202ENST00000395205 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
BBS4-202ENST00000395205 ITSN1Q15811 1721 aa13.21□□□□□ -0.29
BBS4-202ENST00000395205 MST1RQ04912 1400 aa13.21□□□□□ -0.29
BBS4-202ENST00000395205 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
BBS4-202ENST00000395205 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
BBS4-202ENST00000395205 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
BBS4-202ENST00000395205 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
BBS4-202ENST00000395205 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
BBS4-202ENST00000395205 SOX12O15370 315 aa13.19□□□□□ -0.3
BBS4-202ENST00000395205 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
BBS4-202ENST00000395205 AKAP12Q02952 1782 aa13.19□□□□□ -0.3
BBS4-202ENST00000395205 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
BBS4-202ENST00000395205 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
BBS4-202ENST00000395205 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
BBS4-202ENST00000395205 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
BBS4-202ENST00000395205 EMILIN1Q9Y6C2 1016 aa13.17□□□□□ -0.3
BBS4-202ENST00000395205 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
BBS4-202ENST00000395205 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
BBS4-202ENST00000395205 BRINP3Q76B58 766 aa13.16□□□□□ -0.3
BBS4-202ENST00000395205 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
BBS4-202ENST00000395205 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
BBS4-202ENST00000395205 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
BBS4-202ENST00000395205 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
BBS4-202ENST00000395205 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
BBS4-202ENST00000395205 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
BBS4-202ENST00000395205 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
BBS4-202ENST00000395205 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
BBS4-202ENST00000395205 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
BBS4-202ENST00000395205 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
BBS4-202ENST00000395205 U2AF1L5P0DN76 240 aaPredicted RBP13.14□□□□□ -0.31
BBS4-202ENST00000395205 U2AF1Q01081 240 aaKnown RBP eCLIP13.14□□□□□ -0.31
BBS4-202ENST00000395205 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
BBS4-202ENST00000395205 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
BBS4-202ENST00000395205 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
BBS4-202ENST00000395205 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
BBS4-202ENST00000395205 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
BBS4-202ENST00000395205 AMPHP49418 695 aa13.12□□□□□ -0.31
BBS4-202ENST00000395205 INSRP06213 1382 aa13.11□□□□□ -0.31
BBS4-202ENST00000395205 KCNH5Q8NCM2 988 aa13.11□□□□□ -0.31
BBS4-202ENST00000395205 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
BBS4-202ENST00000395205 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
BBS4-202ENST00000395205 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
BBS4-202ENST00000395205 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
BBS4-202ENST00000395205 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
BBS4-202ENST00000395205 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
BBS4-202ENST00000395205 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
BBS4-202ENST00000395205 GCP02774 474 aa13.09□□□□□ -0.31
BBS4-202ENST00000395205 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
BBS4-202ENST00000395205 IL13P35225 146 aa13.08□□□□□ -0.31
BBS4-202ENST00000395205 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.31
BBS4-202ENST00000395205 SMG6Q86US8 1419 aaKnown RBP13.08□□□□□ -0.32
BBS4-202ENST00000395205 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
BBS4-202ENST00000395205 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
BBS4-202ENST00000395205 APAF1O14727 1248 aa13.07□□□□□ -0.32
BBS4-202ENST00000395205 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
BBS4-202ENST00000395205 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
BBS4-202ENST00000395205 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
BBS4-202ENST00000395205 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
BBS4-202ENST00000395205 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
BBS4-202ENST00000395205 TOM1O60784 492 aa13.06□□□□□ -0.32
BBS4-202ENST00000395205 FLT4P35916 1363 aa13.06□□□□□ -0.32
BBS4-202ENST00000395205 HOXC9P31274 260 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 PXDNQ92626 1479 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 FCHSD2O94868 740 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 HMOX1P09601 288 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 USP19O94966 1318 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
BBS4-202ENST00000395205 NEFMP07197 916 aa13.04□□□□□ -0.32
BBS4-202ENST00000395205 ZC3H6P61129 1189 aaKnown RBP13.04□□□□□ -0.32
BBS4-202ENST00000395205 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
BBS4-202ENST00000395205 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
BBS4-202ENST00000395205 TCP11L2Q8N4U5 519 aa13.04□□□□□ -0.32
BBS4-202ENST00000395205 IP6K1Q92551 441 aa13.04□□□□□ -0.32
BBS4-202ENST00000395205 LTV1Q96GA3 475 aaPredicted RBP13.04□□□□□ -0.32
BBS4-202ENST00000395205 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
BBS4-202ENST00000395205 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms