RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
AFF1-202ENST00000395146 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
AFF1-202ENST00000395146 KINO60870 393 aaKnown RBP12.91□□□□□ -0.34
AFF1-202ENST00000395146 GNAI2P04899 355 aa12.91□□□□□ -0.34
AFF1-202ENST00000395146 PDE4CQ08493 712 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 PSME1Q06323 249 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
AFF1-202ENST00000395146 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 WDR33Q9C0J8 1336 aaKnown RBP12.9□□□□□ -0.34
AFF1-202ENST00000395146 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
AFF1-202ENST00000395146 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
AFF1-202ENST00000395146 IL27Q8NEV9 243 aa12.9□□□□□ -0.35
AFF1-202ENST00000395146 CDR1P51861 262 aa12.89□□□□□ -0.35
AFF1-202ENST00000395146 BRMS1Q9HCU9 246 aa12.89□□□□□ -0.35
AFF1-202ENST00000395146 NAIPQ13075 1403 aa12.89□□□□□ -0.35
AFF1-202ENST00000395146 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
AFF1-202ENST00000395146 ZNF396Q96N95 335 aaPredicted RBP12.89□□□□□ -0.35
AFF1-202ENST00000395146 TSR2Q969E8 191 aaKnown RBP12.89□□□□□ -0.35
AFF1-202ENST00000395146 CCDC192P0DO97 292 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 XBP1P17861 261 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
AFF1-202ENST00000395146 NEUROD6Q96NK8 337 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 DHX16O60231 1041 aaKnown RBP12.88□□□□□ -0.35
AFF1-202ENST00000395146 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 C1orf115Q9H7X2 142 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
AFF1-202ENST00000395146 FOSBP53539 338 aa12.88□□□□□ -0.35
AFF1-202ENST00000395146 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 MCM4P33991 863 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 VPS37DQ86XT2 251 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
AFF1-202ENST00000395146 EVA1CP58658 441 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 FIBPO43427 364 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 LRRCC1Q9C099 1032 aa12.87□□□□□ -0.35
AFF1-202ENST00000395146 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
AFF1-202ENST00000395146 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
AFF1-202ENST00000395146 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
AFF1-202ENST00000395146 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
AFF1-202ENST00000395146 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
AFF1-202ENST00000395146 SMC2O95347 1197 aa12.85□□□□□ -0.35
AFF1-202ENST00000395146 SART3Q15020 963 aaKnown RBP12.85□□□□□ -0.35
AFF1-202ENST00000395146 PDILTQ8N807 584 aa12.85□□□□□ -0.35
AFF1-202ENST00000395146 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
AFF1-202ENST00000395146 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
AFF1-202ENST00000395146 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 PRG4Q92954 1404 aaPredicted RBP12.84□□□□□ -0.35
AFF1-202ENST00000395146 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
AFF1-202ENST00000395146 SLC12A5Q9H2X9 1139 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 RPGRIP1LQ68CZ1 1315 aa12.84□□□□□ -0.35
AFF1-202ENST00000395146 ESPNB1AK53 854 aa12.83□□□□□ -0.35
AFF1-202ENST00000395146 NLRP6P59044 892 aa12.83□□□□□ -0.35
AFF1-202ENST00000395146 AFAP1Q8N556 730 aa12.83□□□□□ -0.35
AFF1-202ENST00000395146 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
AFF1-202ENST00000395146 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
AFF1-202ENST00000395146 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
AFF1-202ENST00000395146 KRT85P78386 507 aa12.83□□□□□ -0.36
AFF1-202ENST00000395146 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
AFF1-202ENST00000395146 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
AFF1-202ENST00000395146 PRAM1Q96QH2 718 aa12.83□□□□□ -0.36
AFF1-202ENST00000395146 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
AFF1-202ENST00000395146 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
AFF1-202ENST00000395146 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
AFF1-202ENST00000395146 STK38Q15208 465 aa12.82□□□□□ -0.36
AFF1-202ENST00000395146 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
AFF1-202ENST00000395146 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
AFF1-202ENST00000395146 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
AFF1-202ENST00000395146 NAP1L1P55209 391 aaKnown RBP12.82□□□□□ -0.36
AFF1-202ENST00000395146 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
AFF1-202ENST00000395146 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
AFF1-202ENST00000395146 RRP9O43818 475 aaKnown RBP12.82□□□□□ -0.36
AFF1-202ENST00000395146 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
AFF1-202ENST00000395146 FCHSD2O94868 740 aa12.81□□□□□ -0.36
AFF1-202ENST00000395146 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
AFF1-202ENST00000395146 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
AFF1-202ENST00000395146 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
AFF1-202ENST00000395146 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
AFF1-202ENST00000395146 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
AFF1-202ENST00000395146 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
AFF1-202ENST00000395146 CCDC112Q8NEF3 446 aa12.81□□□□□ -0.36
AFF1-202ENST00000395146 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
AFF1-202ENST00000395146 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
AFF1-202ENST00000395146 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
AFF1-202ENST00000395146 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
AFF1-202ENST00000395146 ZSCAN30Q86W11 494 aa12.8□□□□□ -0.36
AFF1-202ENST00000395146 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
AFF1-202ENST00000395146 NSD3Q9BZ95 1437 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms