RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.71■■■□□ 2.35
VDAC1-203ENST00000395047 PANK3Q9H999 370 aa29.71■■■□□ 2.35
VDAC1-203ENST00000395047 NUTM2GQ5VZR2 741 aa29.68■■■□□ 2.34
VDAC1-203ENST00000395047 ILDR1Q86SU0 546 aaPredicted RBP29.68■■■□□ 2.34
VDAC1-203ENST00000395047 LRRC59Q96AG4 307 aaKnown RBP29.68■■■□□ 2.34
VDAC1-203ENST00000395047 CARD14Q9BXL6 1004 aa29.66■■■□□ 2.34
VDAC1-203ENST00000395047 NRKQ7Z2Y5 1582 aa29.66■■■□□ 2.34
VDAC1-203ENST00000395047 SPATA31A3Q5VYP0 1347 aa29.65■■■□□ 2.34
VDAC1-203ENST00000395047 TNS3Q68CZ2 1445 aa29.64■■■□□ 2.34
VDAC1-203ENST00000395047 TTC21BQ7Z4L5 1316 aa29.64■■■□□ 2.34
VDAC1-203ENST00000395047 SBNO1A3KN83 1393 aa29.64■■■□□ 2.33
VDAC1-203ENST00000395047 ABTB2Q8N961 1025 aa29.63■■■□□ 2.33
VDAC1-203ENST00000395047 NSD3Q9BZ95 1437 aa29.63■■■□□ 2.33
VDAC1-203ENST00000395047 ALS2Q96Q42 1657 aa29.63■■■□□ 2.33
VDAC1-203ENST00000395047 EDC4Q6P2E9 1401 aaKnown RBP29.62■■■□□ 2.33
VDAC1-203ENST00000395047 SSH2Q76I76 1423 aa29.62■■■□□ 2.33
VDAC1-203ENST00000395047 DDX10Q13206 875 aaKnown RBP29.61■■■□□ 2.33
VDAC1-203ENST00000395047 NME9Q86XW9 330 aa29.6■■■□□ 2.33
VDAC1-203ENST00000395047 PIK3C2AO00443 1686 aa29.59■■■□□ 2.33
VDAC1-203ENST00000395047 ZRANB1Q9UGI0 708 aa29.59■■■□□ 2.33
VDAC1-203ENST00000395047 CNGB1Q14028 1251 aaPredicted RBP29.58■■■□□ 2.33
VDAC1-203ENST00000395047 CABLES1Q8TDN4 633 aa29.57■■■□□ 2.32
VDAC1-203ENST00000395047 PNPLA6Q8IY17 1366 aa29.57■■■□□ 2.32
VDAC1-203ENST00000395047 JCADQ9P266 1359 aa29.57■■■□□ 2.32
VDAC1-203ENST00000395047 NLRP6P59044 892 aa29.56■■■□□ 2.32
VDAC1-203ENST00000395047 TTC21AQ8NDW8 1320 aa29.56■■■□□ 2.32
VDAC1-203ENST00000395047 ARHGEF10O15013 1369 aa29.55■■■□□ 2.32
VDAC1-203ENST00000395047 SHPRHQ149N8 1683 aa29.55■■■□□ 2.32
VDAC1-203ENST00000395047 KIF20BQ96Q89 1820 aa29.55■■■□□ 2.32
VDAC1-203ENST00000395047 BRD4O60885 1362 aaPredicted RBP29.55■■■□□ 2.32
VDAC1-203ENST00000395047 NUTM2BA6NNL0 878 aaPredicted RBP29.54■■■□□ 2.32
VDAC1-203ENST00000395047 NUTM2EB1AL46 878 aaPredicted RBP29.54■■■□□ 2.32
VDAC1-203ENST00000395047 NUTM2AQ8IVF1 878 aaPredicted RBP29.54■■■□□ 2.32
VDAC1-203ENST00000395047 GGNBP2Q9H3C7 697 aa29.53■■■□□ 2.32
VDAC1-203ENST00000395047 KNSTRNQ9Y448 316 aa29.53■■■□□ 2.32
VDAC1-203ENST00000395047 SOX12O15370 315 aa29.51■■■□□ 2.31
VDAC1-203ENST00000395047 FYB1O15117 783 aa29.51■■■□□ 2.31
VDAC1-203ENST00000395047 HAP1P54257 671 aaPredicted RBP29.51■■■□□ 2.31
VDAC1-203ENST00000395047 NLRP13Q86W25 1043 aa29.5■■■□□ 2.31
VDAC1-203ENST00000395047 MARF1Q9Y4F3 1742 aaKnown RBP29.49■■■□□ 2.31
VDAC1-203ENST00000395047 CGNL1Q0VF96 1302 aa29.49■■■□□ 2.31
VDAC1-203ENST00000395047 COL22A1Q8NFW1 1626 aaPredicted RBP29.49■■■□□ 2.31
VDAC1-203ENST00000395047 PER1O15534 1290 aaPredicted RBP29.48■■■□□ 2.31
VDAC1-203ENST00000395047 MED1Q15648 1581 aaPredicted RBP29.48■■■□□ 2.31
VDAC1-203ENST00000395047 ABCA3Q99758 1704 aa29.47■■■□□ 2.31
VDAC1-203ENST00000395047 CRYBG1Q9Y4K1 1723 aa29.45■■■□□ 2.31
VDAC1-203ENST00000395047 PHRF1Q9P1Y6 1649 aaKnown RBP29.45■■■□□ 2.3
VDAC1-203ENST00000395047 CC2D1BQ5T0F9 858 aaKnown RBP29.44■■■□□ 2.3
VDAC1-203ENST00000395047 COG3Q96JB2 828 aa29.44■■■□□ 2.3
VDAC1-203ENST00000395047 ADAMTS2O95450 1211 aa29.44■■■□□ 2.3
VDAC1-203ENST00000395047 SPATA31A6Q5VVP1 1343 aa29.41■■■□□ 2.3
VDAC1-203ENST00000395047 AMER1Q5JTC6 1135 aaPredicted RBP29.41■■■□□ 2.3
VDAC1-203ENST00000395047 USP31Q70CQ4 1352 aa29.41■■■□□ 2.3
VDAC1-203ENST00000395047 OVOS2A0A0J9YW53 1432 aa29.41■■■□□ 2.3
VDAC1-203ENST00000395047 OVOS2Q6IE36 1432 aa29.41■■■□□ 2.3
VDAC1-203ENST00000395047 ZBTB7CA1YPR0 619 aa29.4■■■□□ 2.3
VDAC1-203ENST00000395047 FBLN1P23142 703 aa29.4■■■□□ 2.3
VDAC1-203ENST00000395047 USP19O94966 1318 aa29.4■■■□□ 2.3
VDAC1-203ENST00000395047 TNNT2P45379 298 aaPredicted RBP29.4■■■□□ 2.3
VDAC1-203ENST00000395047 ZC3H6P61129 1189 aaKnown RBP29.4■■■□□ 2.3
VDAC1-203ENST00000395047 LRP6O75581 1613 aa29.39■■■□□ 2.3
VDAC1-203ENST00000395047 ANKRD26Q9UPS8 1709 aa29.39■■■□□ 2.3
VDAC1-203ENST00000395047 GCP02774 474 aa29.39■■■□□ 2.3
VDAC1-203ENST00000395047 USP54Q70EL1 1684 aa29.38■■■□□ 2.29
VDAC1-203ENST00000395047 SLIT3O75094 1523 aa29.36■■■□□ 2.29
VDAC1-203ENST00000395047 MEX3CQ5U5Q3 659 aaKnown RBP29.36■■■□□ 2.29
VDAC1-203ENST00000395047 MORC1Q86VD1 984 aa29.34■■■□□ 2.29
VDAC1-203ENST00000395047 KCNH5Q8NCM2 988 aa29.33■■■□□ 2.29
VDAC1-203ENST00000395047 NSD2O96028 1365 aa29.32■■■□□ 2.28
VDAC1-203ENST00000395047 LTN1O94822 1766 aa29.32■■■□□ 2.28
VDAC1-203ENST00000395047 C8orf37Q96NL8 207 aa29.31■■■□□ 2.28
VDAC1-203ENST00000395047 KIAA0232Q92628 1395 aa29.31■■■□□ 2.28
VDAC1-203ENST00000395047 CHRNA2Q15822 529 aa29.31■■■□□ 2.28
VDAC1-203ENST00000395047 MAP2P11137 1827 aaKnown RBP29.3■■■□□ 2.28
VDAC1-203ENST00000395047 NFAT5O94916 1531 aa29.3■■■□□ 2.28
VDAC1-203ENST00000395047 RRS1Q15050 365 aaKnown RBP29.29■■■□□ 2.28
VDAC1-203ENST00000395047 PRDM11Q9NQV5 511 aa29.29■■■□□ 2.28
VDAC1-203ENST00000395047 FAM83GA6ND36 823 aa29.27■■■□□ 2.28
VDAC1-203ENST00000395047 NGLY1Q96IV0 654 aa29.25■■■□□ 2.27
VDAC1-203ENST00000395047 PPM1GO15355 546 aaPredicted RBP29.25■■■□□ 2.27
VDAC1-203ENST00000395047 NPC1L1Q9UHC9 1359 aa29.24■■■□□ 2.27
VDAC1-203ENST00000395047 RGPD5Q99666 1765 aa29.24■■■□□ 2.27
VDAC1-203ENST00000395047 ARHGEF25Q86VW2 580 aa29.23■■■□□ 2.27
VDAC1-203ENST00000395047 MAP3K19Q56UN5 1328 aa29.22■■■□□ 2.27
VDAC1-203ENST00000395047 EMILIN1Q9Y6C2 1016 aa29.22■■■□□ 2.27
VDAC1-203ENST00000395047 PLCH1Q4KWH8 1693 aa29.21■■■□□ 2.27
VDAC1-203ENST00000395047 CPDO75976 1380 aa29.21■■■□□ 2.27
VDAC1-203ENST00000395047 COL14A1Q05707 1796 aaKnown RBP29.2■■■□□ 2.26
VDAC1-203ENST00000395047 AMPHP49418 695 aa29.19■■■□□ 2.26
VDAC1-203ENST00000395047 BTG4Q9NY30 223 aa29.19■■■□□ 2.26
VDAC1-203ENST00000395047 AXIN2Q9Y2T1 843 aa29.18■■■□□ 2.26
VDAC1-203ENST00000395047 POLKQ9UBT6 870 aa29.17■■■□□ 2.26
VDAC1-203ENST00000395047 PEAK1Q9H792 1746 aa29.17■■■□□ 2.26
VDAC1-203ENST00000395047 COL18A1P39060 1754 aa29.17■■■□□ 2.26
VDAC1-203ENST00000395047 AFF2P51816 1311 aa29.16■■■□□ 2.26
VDAC1-203ENST00000395047 AATKQ6ZMQ8 1374 aa29.15■■■□□ 2.26
VDAC1-203ENST00000395047 STRN4Q9NRL3 753 aa29.14■■■□□ 2.26
VDAC1-203ENST00000395047 CAMTA1Q9Y6Y1 1673 aa29.14■■■□□ 2.26
VDAC1-203ENST00000395047 LMO7Q8WWI1 1683 aa29.14■■■□□ 2.25
VDAC1-203ENST00000395047 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms