RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
GTF2F1-201ENST00000394456 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
GTF2F1-201ENST00000394456 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.4■□□□□ 0.38
GTF2F1-201ENST00000394456 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
GTF2F1-201ENST00000394456 FBLN1P23142 703 aa17.39■□□□□ 0.37
GTF2F1-201ENST00000394456 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
GTF2F1-201ENST00000394456 NSD2O96028 1365 aa17.39■□□□□ 0.37
GTF2F1-201ENST00000394456 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
GTF2F1-201ENST00000394456 DLC1Q96QB1 1528 aa17.38■□□□□ 0.37
GTF2F1-201ENST00000394456 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
GTF2F1-201ENST00000394456 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
GTF2F1-201ENST00000394456 U2SURPO15042 1029 aaKnown RBP17.37■□□□□ 0.37
GTF2F1-201ENST00000394456 USP19O94966 1318 aa17.37■□□□□ 0.37
GTF2F1-201ENST00000394456 FYB1O15117 783 aa17.37■□□□□ 0.37
GTF2F1-201ENST00000394456 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
GTF2F1-201ENST00000394456 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
GTF2F1-201ENST00000394456 TMEM2Q9UHN6 1383 aa17.36■□□□□ 0.37
GTF2F1-201ENST00000394456 NFKBIBQ15653 356 aa17.35■□□□□ 0.37
GTF2F1-201ENST00000394456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
GTF2F1-201ENST00000394456 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
GTF2F1-201ENST00000394456 HDGFP51858 240 aaKnown RBP17.34■□□□□ 0.37
GTF2F1-201ENST00000394456 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.37
GTF2F1-201ENST00000394456 LTKP29376 864 aa17.33■□□□□ 0.36
GTF2F1-201ENST00000394456 NLRP1Q9C000 1473 aa17.33■□□□□ 0.36
GTF2F1-201ENST00000394456 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
GTF2F1-201ENST00000394456 C3P01024 1663 aa17.33■□□□□ 0.36
GTF2F1-201ENST00000394456 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
GTF2F1-201ENST00000394456 IL27Q8NEV9 243 aa17.33■□□□□ 0.36
GTF2F1-201ENST00000394456 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
GTF2F1-201ENST00000394456 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
GTF2F1-201ENST00000394456 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
GTF2F1-201ENST00000394456 FER1L4A9Z1Z3 1794 aa17.31■□□□□ 0.36
GTF2F1-201ENST00000394456 DAXXQ9UER7 740 aaPredicted RBP17.31■□□□□ 0.36
GTF2F1-201ENST00000394456 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
GTF2F1-201ENST00000394456 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
GTF2F1-201ENST00000394456 KNDC1Q76NI1 1749 aa17.3■□□□□ 0.36
GTF2F1-201ENST00000394456 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
GTF2F1-201ENST00000394456 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
GTF2F1-201ENST00000394456 PPIP5K1Q6PFW1 1433 aa17.29■□□□□ 0.36
GTF2F1-201ENST00000394456 ADAMTS13Q76LX8 1427 aa17.29■□□□□ 0.36
GTF2F1-201ENST00000394456 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
GTF2F1-201ENST00000394456 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
GTF2F1-201ENST00000394456 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
GTF2F1-201ENST00000394456 RTN4Q9NQC3 1192 aaKnown RBP17.28■□□□□ 0.36
GTF2F1-201ENST00000394456 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
GTF2F1-201ENST00000394456 ATP7BP35670 1465 aa17.27■□□□□ 0.36
GTF2F1-201ENST00000394456 CPS1P31327 1500 aa17.27■□□□□ 0.36
GTF2F1-201ENST00000394456 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
GTF2F1-201ENST00000394456 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
GTF2F1-201ENST00000394456 MED14O60244 1454 aa17.27■□□□□ 0.35
GTF2F1-201ENST00000394456 TECPR2O15040 1411 aa17.26■□□□□ 0.35
GTF2F1-201ENST00000394456 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
GTF2F1-201ENST00000394456 FAM135BQ49AJ0 1406 aa17.26■□□□□ 0.35
GTF2F1-201ENST00000394456 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
GTF2F1-201ENST00000394456 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
GTF2F1-201ENST00000394456 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
GTF2F1-201ENST00000394456 MYH16Q9H6N6 1097 aa17.25■□□□□ 0.35
GTF2F1-201ENST00000394456 SMC4Q9NTJ3 1288 aa17.25■□□□□ 0.35
GTF2F1-201ENST00000394456 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
GTF2F1-201ENST00000394456 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
GTF2F1-201ENST00000394456 NME9Q86XW9 330 aa17.24■□□□□ 0.35
GTF2F1-201ENST00000394456 PLEKHG1Q9ULL1 1385 aa17.24■□□□□ 0.35
GTF2F1-201ENST00000394456 TRIM27P14373 513 aa17.24■□□□□ 0.35
GTF2F1-201ENST00000394456 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
GTF2F1-201ENST00000394456 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
GTF2F1-201ENST00000394456 PRR36Q9H6K5 1346 aa17.23■□□□□ 0.35
GTF2F1-201ENST00000394456 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.23■□□□□ 0.35
GTF2F1-201ENST00000394456 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
GTF2F1-201ENST00000394456 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
GTF2F1-201ENST00000394456 RIPK4P57078 832 aa17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
GTF2F1-201ENST00000394456 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
GTF2F1-201ENST00000394456 NOB1Q9ULX3 412 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-201ENST00000394456 PTPRUQ92729 1446 aa17.21■□□□□ 0.35
GTF2F1-201ENST00000394456 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-201ENST00000394456 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
GTF2F1-201ENST00000394456 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.34
GTF2F1-201ENST00000394456 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
GTF2F1-201ENST00000394456 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
GTF2F1-201ENST00000394456 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
GTF2F1-201ENST00000394456 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
GTF2F1-201ENST00000394456 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
GTF2F1-201ENST00000394456 HMOX1P09601 288 aa17.2■□□□□ 0.34
GTF2F1-201ENST00000394456 MON2Q7Z3U7 1717 aa17.19■□□□□ 0.34
GTF2F1-201ENST00000394456 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
GTF2F1-201ENST00000394456 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
GTF2F1-201ENST00000394456 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
GTF2F1-201ENST00000394456 AKAP12Q02952 1782 aa17.18■□□□□ 0.34
GTF2F1-201ENST00000394456 GSE1Q14687 1217 aa17.18■□□□□ 0.34
GTF2F1-201ENST00000394456 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
GTF2F1-201ENST00000394456 PHACTR3Q96KR7 559 aa17.18■□□□□ 0.34
GTF2F1-201ENST00000394456 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
GTF2F1-201ENST00000394456 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
GTF2F1-201ENST00000394456 SLIT1O75093 1534 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms