RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MON2Q7Z3U7 1717 aa25.22■■□□□ 1.63
CLDND1-203ENST00000394181 AKAP12Q02952 1782 aa25.21■■□□□ 1.63
CLDND1-203ENST00000394181 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-203ENST00000394181 COL3A1P02461 1466 aaPredicted RBP25.2■■□□□ 1.63
CLDND1-203ENST00000394181 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.62
CLDND1-203ENST00000394181 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
CLDND1-203ENST00000394181 CHD2O14647 1828 aaKnown RBP25.2■■□□□ 1.62
CLDND1-203ENST00000394181 TTC21BQ7Z4L5 1316 aa25.19■■□□□ 1.62
CLDND1-203ENST00000394181 ITSN1Q15811 1721 aa25.19■■□□□ 1.62
CLDND1-203ENST00000394181 RNF123Q5XPI4 1314 aa25.18■■□□□ 1.62
CLDND1-203ENST00000394181 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
CLDND1-203ENST00000394181 RRP7AQ9Y3A4 280 aaKnown RBP25.18■■□□□ 1.62
CLDND1-203ENST00000394181 EMILIN1Q9Y6C2 1016 aa25.18■■□□□ 1.62
CLDND1-203ENST00000394181 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
CLDND1-203ENST00000394181 COG3Q96JB2 828 aa25.17■■□□□ 1.62
CLDND1-203ENST00000394181 SPINK5Q9NQ38 1064 aaPredicted RBP25.17■■□□□ 1.62
CLDND1-203ENST00000394181 DMRT2Q9Y5R5 561 aa25.17■■□□□ 1.62
CLDND1-203ENST00000394181 RGPD8O14715 1765 aaPredicted RBP25.16■■□□□ 1.62
CLDND1-203ENST00000394181 PNPLA6Q8IY17 1366 aa25.16■■□□□ 1.62
CLDND1-203ENST00000394181 USP6P35125 1406 aa25.16■■□□□ 1.62
CLDND1-203ENST00000394181 NEUROD2Q15784 382 aa25.16■■□□□ 1.62
CLDND1-203ENST00000394181 TCP11L2Q8N4U5 519 aa25.15■■□□□ 1.62
CLDND1-203ENST00000394181 RCAN3Q9UKA8 241 aa25.15■■□□□ 1.62
CLDND1-203ENST00000394181 GOLGA2Q08379 1002 aa25.15■■□□□ 1.62
CLDND1-203ENST00000394181 RRS1Q15050 365 aaKnown RBP25.14■■□□□ 1.62
CLDND1-203ENST00000394181 DUSP27Q5VZP5 1158 aa25.14■■□□□ 1.61
CLDND1-203ENST00000394181 NGDNQ8NEJ9 315 aaKnown RBP25.14■■□□□ 1.61
CLDND1-203ENST00000394181 DIAPH1O60610 1272 aaKnown RBP25.13■■□□□ 1.61
CLDND1-203ENST00000394181 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
CLDND1-203ENST00000394181 SLFN5Q08AF3 891 aa25.11■■□□□ 1.61
CLDND1-203ENST00000394181 NRKQ7Z2Y5 1582 aa25.11■■□□□ 1.61
CLDND1-203ENST00000394181 WWC1Q8IX03 1113 aa25.11■■□□□ 1.61
CLDND1-203ENST00000394181 KDM4FA0A1W2PPD8 638 aa25.1■■□□□ 1.61
CLDND1-203ENST00000394181 HSPA2P54652 639 aa25.1■■□□□ 1.61
CLDND1-203ENST00000394181 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
CLDND1-203ENST00000394181 IQSEC2Q5JU85 1478 aa25.09■■□□□ 1.61
CLDND1-203ENST00000394181 MAP2P11137 1827 aaKnown RBP25.09■■□□□ 1.61
CLDND1-203ENST00000394181 PLEKHF1Q96S99 279 aa25.09■■□□□ 1.61
CLDND1-203ENST00000394181 AATKQ6ZMQ8 1374 aa25.08■■□□□ 1.61
CLDND1-203ENST00000394181 TRMT2AQ8IZ69 625 aaKnown RBP25.08■■□□□ 1.61
CLDND1-203ENST00000394181 ANKARQ7Z5J8 1434 aa25.08■■□□□ 1.6
CLDND1-203ENST00000394181 FMN2Q9NZ56 1722 aa25.07■■□□□ 1.6
CLDND1-203ENST00000394181 RRP1P56182 461 aaKnown RBP25.05■■□□□ 1.6
CLDND1-203ENST00000394181 OVOS2A0A0J9YW53 1432 aa25.05■■□□□ 1.6
CLDND1-203ENST00000394181 OVOS2Q6IE36 1432 aa25.05■■□□□ 1.6
CLDND1-203ENST00000394181 SOX12O15370 315 aa25.05■■□□□ 1.6
CLDND1-203ENST00000394181 C14orf37Q86TY3 774 aa25.04■■□□□ 1.6
CLDND1-203ENST00000394181 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
CLDND1-203ENST00000394181 NGEFQ8N5V2 710 aa25.04■■□□□ 1.6
CLDND1-203ENST00000394181 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
CLDND1-203ENST00000394181 ERICH6BQ5W0A0 696 aa25.03■■□□□ 1.6
CLDND1-203ENST00000394181 IL13P35225 146 aa25.03■■□□□ 1.6
CLDND1-203ENST00000394181 PLIN1O60240 522 aa25.01■■□□□ 1.59
CLDND1-203ENST00000394181 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
CLDND1-203ENST00000394181 TTC21AQ8NDW8 1320 aa25.01■■□□□ 1.59
CLDND1-203ENST00000394181 NUTM2GQ5VZR2 741 aa25.01■■□□□ 1.59
CLDND1-203ENST00000394181 PHF8Q9UPP1 1060 aa25.01■■□□□ 1.59
CLDND1-203ENST00000394181 E9PSI1 815 aa25■■□□□ 1.59
CLDND1-203ENST00000394181 HMOX1P09601 288 aa25■■□□□ 1.59
CLDND1-203ENST00000394181 PPP4R2Q9NY27 417 aa25■■□□□ 1.59
CLDND1-203ENST00000394181 CDK12Q9NYV4 1490 aaPredicted RBP25■■□□□ 1.59
CLDND1-203ENST00000394181 TMPOP42166 694 aaKnown RBP24.98■■□□□ 1.59
CLDND1-203ENST00000394181 ESCO1Q5FWF5 840 aa24.98■■□□□ 1.59
CLDND1-203ENST00000394181 RSPH6AQ9H0K4 717 aa24.98■■□□□ 1.59
CLDND1-203ENST00000394181 USP31Q70CQ4 1352 aa24.98■■□□□ 1.59
CLDND1-203ENST00000394181 NWD1Q149M9 1564 aa24.98■■□□□ 1.59
CLDND1-203ENST00000394181 FCHSD2O94868 740 aa24.97■■□□□ 1.59
CLDND1-203ENST00000394181 PRKAR2BP31323 418 aa24.97■■□□□ 1.59
CLDND1-203ENST00000394181 CCDC27Q2M243 656 aa24.97■■□□□ 1.59
CLDND1-203ENST00000394181 B4GALNT3Q6L9W6 998 aa24.97■■□□□ 1.59
CLDND1-203ENST00000394181 PAK3O75914 559 aaPredicted RBP24.96■■□□□ 1.59
CLDND1-203ENST00000394181 ORAI2Q96SN7 254 aa24.96■■□□□ 1.59
CLDND1-203ENST00000394181 MAPK8IP3Q9UPT6 1336 aa24.96■■□□□ 1.59
CLDND1-203ENST00000394181 TRIM35Q9UPQ4 493 aa24.95■■□□□ 1.59
CLDND1-203ENST00000394181 NLRP6P59044 892 aa24.95■■□□□ 1.58
CLDND1-203ENST00000394181 PHACTR3Q96KR7 559 aa24.95■■□□□ 1.58
CLDND1-203ENST00000394181 PIK3C2AO00443 1686 aa24.94■■□□□ 1.58
CLDND1-203ENST00000394181 HSP90AB2PQ58FF8 381 aa24.94■■□□□ 1.58
CLDND1-203ENST00000394181 WDR63Q8IWG1 891 aa24.94■■□□□ 1.58
CLDND1-203ENST00000394181 LRRC7Q96NW7 1537 aa24.94■■□□□ 1.58
CLDND1-203ENST00000394181 EIF4A2Q14240 407 aaKnown RBP24.93■■□□□ 1.58
CLDND1-203ENST00000394181 ABTB2Q8N961 1025 aa24.93■■□□□ 1.58
CLDND1-203ENST00000394181 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
CLDND1-203ENST00000394181 RIPK4P57078 832 aa24.91■■□□□ 1.58
CLDND1-203ENST00000394181 PEAK1Q9H792 1746 aa24.91■■□□□ 1.58
CLDND1-203ENST00000394181 EXOC6Q8TAG9 804 aa24.91■■□□□ 1.58
CLDND1-203ENST00000394181 NCBP3Q53F19 620 aaKnown RBP24.9■■□□□ 1.58
CLDND1-203ENST00000394181 XPCQ01831 940 aaPredicted RBP24.89■■□□□ 1.58
CLDND1-203ENST00000394181 PSME1Q06323 249 aa24.89■■□□□ 1.58
CLDND1-203ENST00000394181 C20orf194Q5TEA3 1177 aa24.89■■□□□ 1.58
CLDND1-203ENST00000394181 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.58
CLDND1-203ENST00000394181 STRCP1A6NGW2 1772 aa24.89■■□□□ 1.57
CLDND1-203ENST00000394181 LMTK3Q96Q04 1460 aa24.88■■□□□ 1.57
CLDND1-203ENST00000394181 FOXO3O43524 673 aa24.88■■□□□ 1.57
CLDND1-203ENST00000394181 AEBP1Q8IUX7 1158 aa24.88■■□□□ 1.57
CLDND1-203ENST00000394181 C19orf44Q9H6X5 657 aa24.88■■□□□ 1.57
CLDND1-203ENST00000394181 TMEM94Q12767 1356 aa24.87■■□□□ 1.57
CLDND1-203ENST00000394181 BCAR3O75815 825 aa24.87■■□□□ 1.57
CLDND1-203ENST00000394181 TSR2Q969E8 191 aaKnown RBP24.84■■□□□ 1.57
CLDND1-203ENST00000394181 MARF1Q9Y4F3 1742 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms