RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 TXNDC2Q86VQ3 553 aa17.75■□□□□ 0.43
CCDC142-202ENST00000393965 RARSP54136 660 aaKnown RBP17.73■□□□□ 0.43
CCDC142-202ENST00000393965 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.73■□□□□ 0.43
CCDC142-202ENST00000393965 COL3A1P02461 1466 aaPredicted RBP17.73■□□□□ 0.43
CCDC142-202ENST00000393965 NRXN3Q9Y4C0 1643 aa17.73■□□□□ 0.43
CCDC142-202ENST00000393965 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
CCDC142-202ENST00000393965 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
CCDC142-202ENST00000393965 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
CCDC142-202ENST00000393965 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
CCDC142-202ENST00000393965 SLKQ9H2G2 1235 aaPredicted RBP17.72■□□□□ 0.43
CCDC142-202ENST00000393965 CENPQQ7L2Z9 268 aaPredicted RBP17.71■□□□□ 0.43
CCDC142-202ENST00000393965 ATAD2Q6PL18 1390 aa17.7■□□□□ 0.42
CCDC142-202ENST00000393965 TERF2IPQ9NYB0 399 aa17.7■□□□□ 0.42
CCDC142-202ENST00000393965 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
CCDC142-202ENST00000393965 AGLP35573 1532 aa17.7■□□□□ 0.42
CCDC142-202ENST00000393965 NSD2O96028 1365 aa17.7■□□□□ 0.42
CCDC142-202ENST00000393965 ANKRD26Q9UPS8 1709 aa17.7■□□□□ 0.42
CCDC142-202ENST00000393965 ZMYM3Q14202 1370 aa17.69■□□□□ 0.42
CCDC142-202ENST00000393965 KIF20BQ96Q89 1820 aa17.69■□□□□ 0.42
CCDC142-202ENST00000393965 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
CCDC142-202ENST00000393965 CEBPAP49715 358 aaPredicted RBP17.69■□□□□ 0.42
CCDC142-202ENST00000393965 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
CCDC142-202ENST00000393965 MS4A1P11836 297 aa17.69■□□□□ 0.42
CCDC142-202ENST00000393965 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
CCDC142-202ENST00000393965 NME9Q86XW9 330 aa17.68■□□□□ 0.42
CCDC142-202ENST00000393965 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
CCDC142-202ENST00000393965 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
CCDC142-202ENST00000393965 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
CCDC142-202ENST00000393965 C8orf34Q49A92 452 aa17.67■□□□□ 0.42
CCDC142-202ENST00000393965 EMILIN1Q9Y6C2 1016 aa17.67■□□□□ 0.42
CCDC142-202ENST00000393965 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
CCDC142-202ENST00000393965 HMOX1P09601 288 aa17.66■□□□□ 0.42
CCDC142-202ENST00000393965 WDR63Q8IWG1 891 aa17.66■□□□□ 0.42
CCDC142-202ENST00000393965 EXOSC9Q06265 439 aaKnown RBP17.66■□□□□ 0.42
CCDC142-202ENST00000393965 PCDHB15Q9Y5E8 787 aa17.66■□□□□ 0.42
CCDC142-202ENST00000393965 POLKQ9UBT6 870 aa17.65■□□□□ 0.42
CCDC142-202ENST00000393965 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
CCDC142-202ENST00000393965 RIPK4P57078 832 aa17.63■□□□□ 0.41
CCDC142-202ENST00000393965 NFKBIBQ15653 356 aa17.63■□□□□ 0.41
CCDC142-202ENST00000393965 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
CCDC142-202ENST00000393965 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
CCDC142-202ENST00000393965 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
CCDC142-202ENST00000393965 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
CCDC142-202ENST00000393965 FRAT2O75474 233 aaPredicted RBP17.63■□□□□ 0.41
CCDC142-202ENST00000393965 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
CCDC142-202ENST00000393965 PPIP5K1Q6PFW1 1433 aa17.62■□□□□ 0.41
CCDC142-202ENST00000393965 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
CCDC142-202ENST00000393965 NGEFQ8N5V2 710 aa17.62■□□□□ 0.41
CCDC142-202ENST00000393965 WASLO00401 505 aaPredicted RBP17.62■□□□□ 0.41
CCDC142-202ENST00000393965 CPS1P31327 1500 aa17.62■□□□□ 0.41
CCDC142-202ENST00000393965 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
CCDC142-202ENST00000393965 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
CCDC142-202ENST00000393965 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
CCDC142-202ENST00000393965 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
CCDC142-202ENST00000393965 LTKP29376 864 aa17.6■□□□□ 0.41
CCDC142-202ENST00000393965 NUDT16Q96DE0 195 aaKnown RBP17.6■□□□□ 0.41
CCDC142-202ENST00000393965 SSH1Q8WYL5 1049 aa17.59■□□□□ 0.41
CCDC142-202ENST00000393965 SEC24BO95487 1268 aa17.59■□□□□ 0.41
CCDC142-202ENST00000393965 PNPLA6Q8IY17 1366 aa17.59■□□□□ 0.41
CCDC142-202ENST00000393965 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
CCDC142-202ENST00000393965 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.41
CCDC142-202ENST00000393965 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
CCDC142-202ENST00000393965 ROBO2Q9HCK4 1378 aa17.58■□□□□ 0.4
CCDC142-202ENST00000393965 SLC26A8Q96RN1 970 aa17.58■□□□□ 0.4
CCDC142-202ENST00000393965 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
CCDC142-202ENST00000393965 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
CCDC142-202ENST00000393965 MED14O60244 1454 aa17.58■□□□□ 0.4
CCDC142-202ENST00000393965 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
CCDC142-202ENST00000393965 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
CCDC142-202ENST00000393965 UBR1Q8IWV7 1749 aa17.57■□□□□ 0.4
CCDC142-202ENST00000393965 TNRQ92752 1358 aa17.56■□□□□ 0.4
CCDC142-202ENST00000393965 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
CCDC142-202ENST00000393965 SOX12O15370 315 aa17.55■□□□□ 0.4
CCDC142-202ENST00000393965 TRIM27P14373 513 aa17.55■□□□□ 0.4
CCDC142-202ENST00000393965 DDRGK1Q96HY6 314 aa17.55■□□□□ 0.4
CCDC142-202ENST00000393965 NOB1Q9ULX3 412 aaKnown RBP17.54■□□□□ 0.4
CCDC142-202ENST00000393965 ATP7BP35670 1465 aa17.54■□□□□ 0.4
CCDC142-202ENST00000393965 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
CCDC142-202ENST00000393965 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
CCDC142-202ENST00000393965 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.54■□□□□ 0.4
CCDC142-202ENST00000393965 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
CCDC142-202ENST00000393965 GSE1Q14687 1217 aa17.53■□□□□ 0.4
CCDC142-202ENST00000393965 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
CCDC142-202ENST00000393965 ADAMTS13Q76LX8 1427 aa17.52■□□□□ 0.4
CCDC142-202ENST00000393965 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
CCDC142-202ENST00000393965 FAM135BQ49AJ0 1406 aa17.52■□□□□ 0.4
CCDC142-202ENST00000393965 IL13P35225 146 aa17.52■□□□□ 0.4
CCDC142-202ENST00000393965 MVPQ14764 893 aaKnown RBP17.52■□□□□ 0.4
CCDC142-202ENST00000393965 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.39
CCDC142-202ENST00000393965 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
CCDC142-202ENST00000393965 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
CCDC142-202ENST00000393965 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
CCDC142-202ENST00000393965 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
CCDC142-202ENST00000393965 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
CCDC142-202ENST00000393965 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
CCDC142-202ENST00000393965 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC142-202ENST00000393965 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
CCDC142-202ENST00000393965 MON2Q7Z3U7 1717 aa17.5■□□□□ 0.39
CCDC142-202ENST00000393965 PTPRUQ92729 1446 aa17.5■□□□□ 0.39
CCDC142-202ENST00000393965 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms