RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 DLC1Q96QB1 1528 aa17.94■□□□□ 0.46
GAP43-202ENST00000393780 PNPLA6Q8IY17 1366 aa17.94■□□□□ 0.46
GAP43-202ENST00000393780 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
GAP43-202ENST00000393780 SRPK2P78362 688 aaKnown RBP17.94■□□□□ 0.46
GAP43-202ENST00000393780 ARHGEF40Q8TER5 1519 aa17.93■□□□□ 0.46
GAP43-202ENST00000393780 GSE1Q14687 1217 aa17.93■□□□□ 0.46
GAP43-202ENST00000393780 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
GAP43-202ENST00000393780 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
GAP43-202ENST00000393780 DZIP1LQ8IYY4 767 aaKnown RBP17.92■□□□□ 0.46
GAP43-202ENST00000393780 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
GAP43-202ENST00000393780 FYB1O15117 783 aa17.92■□□□□ 0.46
GAP43-202ENST00000393780 BECN1Q14457 450 aa17.92■□□□□ 0.46
GAP43-202ENST00000393780 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
GAP43-202ENST00000393780 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
GAP43-202ENST00000393780 SEC24BO95487 1268 aa17.9■□□□□ 0.46
GAP43-202ENST00000393780 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
GAP43-202ENST00000393780 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
GAP43-202ENST00000393780 STK26Q9P289 416 aa17.9■□□□□ 0.46
GAP43-202ENST00000393780 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
GAP43-202ENST00000393780 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
GAP43-202ENST00000393780 ATP7BP35670 1465 aa17.89■□□□□ 0.45
GAP43-202ENST00000393780 HDAC1Q13547 482 aaPredicted RBP17.88■□□□□ 0.45
GAP43-202ENST00000393780 SAFB2Q14151 953 aaKnown RBP eCLIP17.88■□□□□ 0.45
GAP43-202ENST00000393780 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
GAP43-202ENST00000393780 AGLP35573 1532 aa17.88■□□□□ 0.45
GAP43-202ENST00000393780 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
GAP43-202ENST00000393780 EXOSC9Q06265 439 aaKnown RBP17.88■□□□□ 0.45
GAP43-202ENST00000393780 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
GAP43-202ENST00000393780 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
GAP43-202ENST00000393780 POGKQ9P215 609 aa17.88■□□□□ 0.45
GAP43-202ENST00000393780 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
GAP43-202ENST00000393780 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
GAP43-202ENST00000393780 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
GAP43-202ENST00000393780 SMC4Q9NTJ3 1288 aa17.87■□□□□ 0.45
GAP43-202ENST00000393780 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
GAP43-202ENST00000393780 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
GAP43-202ENST00000393780 LRRC7Q96NW7 1537 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 RIMBP3CA6NJZ7 1639 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 RIMBP3BA6NNM3 1639 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 RIMBP3Q9UFD9 1639 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 PPIP5K1Q6PFW1 1433 aa17.85■□□□□ 0.45
GAP43-202ENST00000393780 FAM135BQ49AJ0 1406 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 TRIM27P14373 513 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 CDK19Q9BWU1 502 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 SPATA31D1Q6ZQQ2 1576 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 FCHSD2O94868 740 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 ALDH1L2Q3SY69 923 aa17.84■□□□□ 0.45
GAP43-202ENST00000393780 FRAT2O75474 233 aaPredicted RBP17.83■□□□□ 0.44
GAP43-202ENST00000393780 RIPK4P57078 832 aa17.83■□□□□ 0.44
GAP43-202ENST00000393780 ZNF428Q96B54 188 aa17.83■□□□□ 0.44
GAP43-202ENST00000393780 BRPF1P55201 1214 aaPredicted RBP17.82■□□□□ 0.44
GAP43-202ENST00000393780 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
GAP43-202ENST00000393780 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
GAP43-202ENST00000393780 A2ML1A8K2U0 1454 aa17.81■□□□□ 0.44
GAP43-202ENST00000393780 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
GAP43-202ENST00000393780 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
GAP43-202ENST00000393780 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
GAP43-202ENST00000393780 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
GAP43-202ENST00000393780 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
GAP43-202ENST00000393780 CABP1Q9NZU7 370 aa17.79■□□□□ 0.44
GAP43-202ENST00000393780 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
GAP43-202ENST00000393780 ITPRIPQ8IWB1 547 aa17.78■□□□□ 0.44
GAP43-202ENST00000393780 ZBTB40Q9NUA8 1239 aa17.78■□□□□ 0.44
GAP43-202ENST00000393780 RIMS2Q9UQ26 1411 aa17.77■□□□□ 0.44
GAP43-202ENST00000393780 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
GAP43-202ENST00000393780 DIP2BQ9P265 1576 aa17.77■□□□□ 0.44
GAP43-202ENST00000393780 CPSF1Q10570 1443 aaKnown RBP17.77■□□□□ 0.43
GAP43-202ENST00000393780 EDC4Q6P2E9 1401 aaKnown RBP17.77■□□□□ 0.43
GAP43-202ENST00000393780 MON2Q7Z3U7 1717 aa17.77■□□□□ 0.43
GAP43-202ENST00000393780 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.43
GAP43-202ENST00000393780 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
GAP43-202ENST00000393780 NRXN3Q9Y4C0 1643 aa17.76■□□□□ 0.43
GAP43-202ENST00000393780 CALD1Q05682 793 aaKnown RBP17.76■□□□□ 0.43
GAP43-202ENST00000393780 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
GAP43-202ENST00000393780 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
GAP43-202ENST00000393780 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
GAP43-202ENST00000393780 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
GAP43-202ENST00000393780 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
GAP43-202ENST00000393780 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
GAP43-202ENST00000393780 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
GAP43-202ENST00000393780 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
GAP43-202ENST00000393780 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
GAP43-202ENST00000393780 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
GAP43-202ENST00000393780 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
GAP43-202ENST00000393780 C22orf23Q9BZE7 217 aa17.72■□□□□ 0.43
GAP43-202ENST00000393780 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
GAP43-202ENST00000393780 NUCB1Q02818 461 aa17.72■□□□□ 0.43
GAP43-202ENST00000393780 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
GAP43-202ENST00000393780 IFT57Q9NWB7 429 aa17.7■□□□□ 0.42
GAP43-202ENST00000393780 ITSN1Q15811 1721 aa17.7■□□□□ 0.42
GAP43-202ENST00000393780 TECPR2O15040 1411 aa17.7■□□□□ 0.42
GAP43-202ENST00000393780 C3P01024 1663 aa17.7■□□□□ 0.42
GAP43-202ENST00000393780 IL13P35225 146 aa17.7■□□□□ 0.42
GAP43-202ENST00000393780 SLKQ9H2G2 1235 aaPredicted RBP17.7■□□□□ 0.42
GAP43-202ENST00000393780 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
GAP43-202ENST00000393780 GNAI1P63096 354 aa17.69■□□□□ 0.42
GAP43-202ENST00000393780 MRPL50Q8N5N7 158 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms