RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 SSH2Q76I76 1423 aa23.32■■□□□ 1.32
MBD4-202ENST00000393278 PMFBP1Q8TBY8 1022 aa23.31■■□□□ 1.32
MBD4-202ENST00000393278 SENP3-EIF4A1A0A087X0R7 540 aa23.3■■□□□ 1.32
MBD4-202ENST00000393278 PROSER2Q86WR7 435 aaPredicted RBP23.28■■□□□ 1.32
MBD4-202ENST00000393278 NGDNQ8NEJ9 315 aaKnown RBP23.28■■□□□ 1.32
MBD4-202ENST00000393278 COG3Q96JB2 828 aa23.28■■□□□ 1.32
MBD4-202ENST00000393278 COL3A1P02461 1466 aaPredicted RBP23.28■■□□□ 1.32
MBD4-202ENST00000393278 ZRANB1Q9UGI0 708 aa23.28■■□□□ 1.32
MBD4-202ENST00000393278 AATKQ6ZMQ8 1374 aa23.27■■□□□ 1.32
MBD4-202ENST00000393278 STRCQ7RTU9 1775 aa23.27■■□□□ 1.32
MBD4-202ENST00000393278 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.31
MBD4-202ENST00000393278 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
MBD4-202ENST00000393278 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
MBD4-202ENST00000393278 PNPLA6Q8IY17 1366 aa23.26■■□□□ 1.31
MBD4-202ENST00000393278 STRCP1A6NGW2 1772 aa23.25■■□□□ 1.31
MBD4-202ENST00000393278 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
MBD4-202ENST00000393278 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
MBD4-202ENST00000393278 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
MBD4-202ENST00000393278 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
MBD4-202ENST00000393278 NCOA3Q9Y6Q9 1424 aa23.22■■□□□ 1.31
MBD4-202ENST00000393278 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
MBD4-202ENST00000393278 PDE3BQ13370 1112 aa23.22■■□□□ 1.31
MBD4-202ENST00000393278 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
MBD4-202ENST00000393278 NUDCQ9Y266 331 aa23.22■■□□□ 1.31
MBD4-202ENST00000393278 MAP2P11137 1827 aaKnown RBP23.21■■□□□ 1.31
MBD4-202ENST00000393278 FBLN1P23142 703 aa23.2■■□□□ 1.3
MBD4-202ENST00000393278 TMEM94Q12767 1356 aa23.19■■□□□ 1.3
MBD4-202ENST00000393278 USP31Q70CQ4 1352 aa23.19■■□□□ 1.3
MBD4-202ENST00000393278 C19orf44Q9H6X5 657 aa23.19■■□□□ 1.3
MBD4-202ENST00000393278 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
MBD4-202ENST00000393278 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
MBD4-202ENST00000393278 EMILIN1Q9Y6C2 1016 aa23.17■■□□□ 1.3
MBD4-202ENST00000393278 APAF1O14727 1248 aa23.16■■□□□ 1.3
MBD4-202ENST00000393278 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
MBD4-202ENST00000393278 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
MBD4-202ENST00000393278 DCCP43146 1447 aa23.16■■□□□ 1.3
MBD4-202ENST00000393278 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
MBD4-202ENST00000393278 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
MBD4-202ENST00000393278 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
MBD4-202ENST00000393278 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
MBD4-202ENST00000393278 ZNF521Q96K83 1311 aa23.15■■□□□ 1.3
MBD4-202ENST00000393278 PPM1GO15355 546 aaPredicted RBP23.15■■□□□ 1.3
MBD4-202ENST00000393278 IQSEC2Q5JU85 1478 aa23.14■■□□□ 1.3
MBD4-202ENST00000393278 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
MBD4-202ENST00000393278 USP54Q70EL1 1684 aa23.14■■□□□ 1.29
MBD4-202ENST00000393278 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
MBD4-202ENST00000393278 RRS1Q15050 365 aaKnown RBP23.13■■□□□ 1.29
MBD4-202ENST00000393278 U2SURPO15042 1029 aaKnown RBP23.13■■□□□ 1.29
MBD4-202ENST00000393278 LRRC7Q96NW7 1537 aa23.11■■□□□ 1.29
MBD4-202ENST00000393278 ORAI2Q96SN7 254 aa23.11■■□□□ 1.29
MBD4-202ENST00000393278 CDCA7LQ96GN5 454 aa23.1■■□□□ 1.29
MBD4-202ENST00000393278 MST1RQ04912 1400 aa23.1■■□□□ 1.29
MBD4-202ENST00000393278 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
MBD4-202ENST00000393278 NEFLP07196 543 aa23.09■■□□□ 1.29
MBD4-202ENST00000393278 ATF3P18847 181 aa23.09■■□□□ 1.29
MBD4-202ENST00000393278 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
MBD4-202ENST00000393278 PAK3O75914 559 aaPredicted RBP23.08■■□□□ 1.29
MBD4-202ENST00000393278 IL13P35225 146 aa23.08■■□□□ 1.29
MBD4-202ENST00000393278 NLRP6P59044 892 aa23.08■■□□□ 1.29
MBD4-202ENST00000393278 PSME1Q06323 249 aa23.08■■□□□ 1.29
MBD4-202ENST00000393278 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
MBD4-202ENST00000393278 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
MBD4-202ENST00000393278 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
MBD4-202ENST00000393278 XIRP1Q702N8 1843 aaKnown RBP23.07■■□□□ 1.28
MBD4-202ENST00000393278 MSH6P52701 1360 aa23.07■■□□□ 1.28
MBD4-202ENST00000393278 NCBP3Q53F19 620 aaKnown RBP23.06■■□□□ 1.28
MBD4-202ENST00000393278 CADPS2Q86UW7 1296 aa23.06■■□□□ 1.28
MBD4-202ENST00000393278 ZNF335Q9H4Z2 1342 aaPredicted RBP23.06■■□□□ 1.28
MBD4-202ENST00000393278 GOLGA2Q08379 1002 aa23.06■■□□□ 1.28
MBD4-202ENST00000393278 PEAK1Q9H792 1746 aa23.06■■□□□ 1.28
MBD4-202ENST00000393278 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
MBD4-202ENST00000393278 FOXO3O43524 673 aa23.04■■□□□ 1.28
MBD4-202ENST00000393278 FKBP8Q14318 412 aa23.04■■□□□ 1.28
MBD4-202ENST00000393278 MAP3K19Q56UN5 1328 aa23.04■■□□□ 1.28
MBD4-202ENST00000393278 FCHSD2O94868 740 aa23.03■■□□□ 1.28
MBD4-202ENST00000393278 SOX12O15370 315 aa23.03■■□□□ 1.28
MBD4-202ENST00000393278 NUTM2GQ5VZR2 741 aa23.03■■□□□ 1.28
MBD4-202ENST00000393278 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
MBD4-202ENST00000393278 CCDC27Q2M243 656 aa23.02■■□□□ 1.28
MBD4-202ENST00000393278 WWC1Q8IX03 1113 aa23.02■■□□□ 1.28
MBD4-202ENST00000393278 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
MBD4-202ENST00000393278 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
MBD4-202ENST00000393278 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
MBD4-202ENST00000393278 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
MBD4-202ENST00000393278 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
MBD4-202ENST00000393278 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
MBD4-202ENST00000393278 SLFN5Q08AF3 891 aa23■■□□□ 1.27
MBD4-202ENST00000393278 RNF123Q5XPI4 1314 aa23■■□□□ 1.27
MBD4-202ENST00000393278 FLT4P35916 1363 aa23■■□□□ 1.27
MBD4-202ENST00000393278 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
MBD4-202ENST00000393278 KIF24Q5T7B8 1368 aa22.99■■□□□ 1.27
MBD4-202ENST00000393278 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
MBD4-202ENST00000393278 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
MBD4-202ENST00000393278 TRMT2AQ8IZ69 625 aaKnown RBP22.99■■□□□ 1.27
MBD4-202ENST00000393278 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
MBD4-202ENST00000393278 KRT28Q7Z3Y7 464 aa22.98■■□□□ 1.27
MBD4-202ENST00000393278 XPCQ01831 940 aaPredicted RBP22.97■■□□□ 1.27
MBD4-202ENST00000393278 E9PSI1 815 aa22.97■■□□□ 1.27
MBD4-202ENST00000393278 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
MBD4-202ENST00000393278 TMPOP42166 694 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms