RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 COG3Q96JB2 828 aa12.83□□□□□ -0.36
SYT1-202ENST00000393240 USP6P35125 1406 aa12.83□□□□□ -0.36
SYT1-202ENST00000393240 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
SYT1-202ENST00000393240 ITSN1Q15811 1721 aa12.83□□□□□ -0.36
SYT1-202ENST00000393240 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
SYT1-202ENST00000393240 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
SYT1-202ENST00000393240 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
SYT1-202ENST00000393240 APAF1O14727 1248 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
SYT1-202ENST00000393240 TTC21AQ8NDW8 1320 aa12.81□□□□□ -0.36
SYT1-202ENST00000393240 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
SYT1-202ENST00000393240 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
SYT1-202ENST00000393240 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
SYT1-202ENST00000393240 FMN2Q9NZ56 1722 aa12.8□□□□□ -0.36
SYT1-202ENST00000393240 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
SYT1-202ENST00000393240 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
SYT1-202ENST00000393240 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
SYT1-202ENST00000393240 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
SYT1-202ENST00000393240 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
SYT1-202ENST00000393240 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
SYT1-202ENST00000393240 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYT1-202ENST00000393240 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
SYT1-202ENST00000393240 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
SYT1-202ENST00000393240 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
SYT1-202ENST00000393240 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
SYT1-202ENST00000393240 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
SYT1-202ENST00000393240 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
SYT1-202ENST00000393240 NALCNQ8IZF0 1738 aa12.77□□□□□ -0.37
SYT1-202ENST00000393240 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
SYT1-202ENST00000393240 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.37
SYT1-202ENST00000393240 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
SYT1-202ENST00000393240 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
SYT1-202ENST00000393240 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
SYT1-202ENST00000393240 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
SYT1-202ENST00000393240 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
SYT1-202ENST00000393240 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
SYT1-202ENST00000393240 FBLN1P23142 703 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 E9PSI1 815 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 FCHSD2O94868 740 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
SYT1-202ENST00000393240 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SYT1-202ENST00000393240 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
SYT1-202ENST00000393240 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
SYT1-202ENST00000393240 IL13P35225 146 aa12.73□□□□□ -0.37
SYT1-202ENST00000393240 WDR63Q8IWG1 891 aa12.73□□□□□ -0.37
SYT1-202ENST00000393240 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
SYT1-202ENST00000393240 RGPD8O14715 1765 aaPredicted RBP12.73□□□□□ -0.37
SYT1-202ENST00000393240 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
SYT1-202ENST00000393240 C19orf44Q9H6X5 657 aa12.73□□□□□ -0.37
SYT1-202ENST00000393240 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
SYT1-202ENST00000393240 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
SYT1-202ENST00000393240 IRX6P78412 446 aaPredicted RBP12.72□□□□□ -0.37
SYT1-202ENST00000393240 HSPA2P54652 639 aa12.71□□□□□ -0.37
SYT1-202ENST00000393240 LMTK3Q96Q04 1460 aa12.71□□□□□ -0.37
SYT1-202ENST00000393240 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.38
SYT1-202ENST00000393240 RRP1P56182 461 aaKnown RBP12.7□□□□□ -0.38
SYT1-202ENST00000393240 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
SYT1-202ENST00000393240 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
SYT1-202ENST00000393240 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
SYT1-202ENST00000393240 TMPOP42166 694 aaKnown RBP12.7□□□□□ -0.38
SYT1-202ENST00000393240 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
SYT1-202ENST00000393240 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
SYT1-202ENST00000393240 LRRC7Q96NW7 1537 aa12.69□□□□□ -0.38
SYT1-202ENST00000393240 NLRP6P59044 892 aa12.69□□□□□ -0.38
SYT1-202ENST00000393240 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
SYT1-202ENST00000393240 PIK3C2AO00443 1686 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 DCCP43146 1447 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 NEFMP07197 916 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 PSME1Q06323 249 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 TMEM94Q12767 1356 aa12.68□□□□□ -0.38
SYT1-202ENST00000393240 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
SYT1-202ENST00000393240 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
SYT1-202ENST00000393240 MAP3K19Q56UN5 1328 aa12.66□□□□□ -0.38
SYT1-202ENST00000393240 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
SYT1-202ENST00000393240 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
SYT1-202ENST00000393240 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
SYT1-202ENST00000393240 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
SYT1-202ENST00000393240 IL16Q14005 1332 aa12.66□□□□□ -0.38
SYT1-202ENST00000393240 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
SYT1-202ENST00000393240 FLT4P35916 1363 aa12.66□□□□□ -0.38
SYT1-202ENST00000393240 ATF3P18847 181 aa12.65□□□□□ -0.38
SYT1-202ENST00000393240 RIPK4P57078 832 aa12.65□□□□□ -0.38
SYT1-202ENST00000393240 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
SYT1-202ENST00000393240 HMOX1P09601 288 aa12.65□□□□□ -0.38
SYT1-202ENST00000393240 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
SYT1-202ENST00000393240 NFE2L2Q16236 605 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms