RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 ABTB2Q8N961 1025 aa22.47■■□□□ 1.19
CSHL1-204ENST00000392824 CABLES1Q8TDN4 633 aa22.47■■□□□ 1.19
CSHL1-204ENST00000392824 C8orf37Q96NL8 207 aa22.47■■□□□ 1.19
CSHL1-204ENST00000392824 BRD4O60885 1362 aaPredicted RBP22.47■■□□□ 1.19
CSHL1-204ENST00000392824 NGLY1Q96IV0 654 aa22.46■■□□□ 1.19
CSHL1-204ENST00000392824 TERF2IPQ9NYB0 399 aa22.46■■□□□ 1.19
CSHL1-204ENST00000392824 NUTM2GQ5VZR2 741 aa22.44■■□□□ 1.18
CSHL1-204ENST00000392824 USP6P35125 1406 aa22.43■■□□□ 1.18
CSHL1-204ENST00000392824 KTN1Q86UP2 1357 aaKnown RBP22.43■■□□□ 1.18
CSHL1-204ENST00000392824 ZNF772Q68DY9 489 aaPredicted RBP22.43■■□□□ 1.18
CSHL1-204ENST00000392824 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
CSHL1-204ENST00000392824 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
CSHL1-204ENST00000392824 COL22A1Q8NFW1 1626 aaPredicted RBP22.42■■□□□ 1.18
CSHL1-204ENST00000392824 RGS17Q9UGC6 210 aaPredicted RBP22.41■■□□□ 1.18
CSHL1-204ENST00000392824 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
CSHL1-204ENST00000392824 AFF2P51816 1311 aa22.4■■□□□ 1.18
CSHL1-204ENST00000392824 TTC21BQ7Z4L5 1316 aa22.4■■□□□ 1.18
CSHL1-204ENST00000392824 POLR3GLQ9BT43 218 aa22.4■■□□□ 1.18
CSHL1-204ENST00000392824 NLRP6P59044 892 aa22.39■■□□□ 1.17
CSHL1-204ENST00000392824 TRPM3Q9HCF6 1732 aaPredicted RBP22.39■■□□□ 1.17
CSHL1-204ENST00000392824 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
CSHL1-204ENST00000392824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.37■■□□□ 1.17
CSHL1-204ENST00000392824 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
CSHL1-204ENST00000392824 FNBP4Q8N3X1 1017 aaPredicted RBP22.35■■□□□ 1.17
CSHL1-204ENST00000392824 USP21Q9UK80 565 aa22.35■■□□□ 1.17
CSHL1-204ENST00000392824 ALS2Q96Q42 1657 aa22.34■■□□□ 1.17
CSHL1-204ENST00000392824 POTEAQ6S8J7 498 aa22.34■■□□□ 1.17
CSHL1-204ENST00000392824 A0A1W2PP64 1363 aa22.34■■□□□ 1.17
CSHL1-204ENST00000392824 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.16
CSHL1-204ENST00000392824 FAM83GA6ND36 823 aa22.32■■□□□ 1.16
CSHL1-204ENST00000392824 GCP02774 474 aa22.32■■□□□ 1.16
CSHL1-204ENST00000392824 QTRT2Q9H974 415 aaKnown RBP22.32■■□□□ 1.16
CSHL1-204ENST00000392824 ANKRD36BQ8N2N9 1353 aa22.32■■□□□ 1.16
CSHL1-204ENST00000392824 ZC3H6P61129 1189 aaKnown RBP22.31■■□□□ 1.16
CSHL1-204ENST00000392824 PRDM11Q9NQV5 511 aa22.31■■□□□ 1.16
CSHL1-204ENST00000392824 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
CSHL1-204ENST00000392824 USP19O94966 1318 aa22.31■■□□□ 1.16
CSHL1-204ENST00000392824 ILDR2Q71H61 639 aa22.3■■□□□ 1.16
CSHL1-204ENST00000392824 NME9Q86XW9 330 aa22.29■■□□□ 1.16
CSHL1-204ENST00000392824 RXRBP28702 533 aa22.28■■□□□ 1.16
CSHL1-204ENST00000392824 UNC5CLQ8IV45 518 aa22.28■■□□□ 1.16
CSHL1-204ENST00000392824 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
CSHL1-204ENST00000392824 TRPC5Q9UL62 973 aaPredicted RBP22.28■■□□□ 1.16
CSHL1-204ENST00000392824 C11orf95C9JLR9 678 aaPredicted RBP22.27■■□□□ 1.16
CSHL1-204ENST00000392824 KIAA0232Q92628 1395 aa22.26■■□□□ 1.15
CSHL1-204ENST00000392824 AKAP12Q02952 1782 aa22.26■■□□□ 1.15
CSHL1-204ENST00000392824 ZRANB1Q9UGI0 708 aa22.26■■□□□ 1.15
CSHL1-204ENST00000392824 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
CSHL1-204ENST00000392824 SOX12O15370 315 aa22.25■■□□□ 1.15
CSHL1-204ENST00000392824 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
CSHL1-204ENST00000392824 CHRNA2Q15822 529 aa22.25■■□□□ 1.15
CSHL1-204ENST00000392824 BTG4Q9NY30 223 aa22.25■■□□□ 1.15
CSHL1-204ENST00000392824 USP31Q70CQ4 1352 aa22.25■■□□□ 1.15
CSHL1-204ENST00000392824 RBM6P78332 1123 aaKnown RBP22.24■■□□□ 1.15
CSHL1-204ENST00000392824 COG3Q96JB2 828 aa22.23■■□□□ 1.15
CSHL1-204ENST00000392824 BCL9LQ86UU0 1499 aa22.22■■□□□ 1.15
CSHL1-204ENST00000392824 SLIT2O94813 1529 aa22.22■■□□□ 1.15
CSHL1-204ENST00000392824 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
CSHL1-204ENST00000392824 MON2Q7Z3U7 1717 aa22.22■■□□□ 1.15
CSHL1-204ENST00000392824 CPDO75976 1380 aa22.22■■□□□ 1.15
CSHL1-204ENST00000392824 CARD14Q9BXL6 1004 aa22.21■■□□□ 1.15
CSHL1-204ENST00000392824 KIF7Q2M1P5 1343 aa22.21■■□□□ 1.15
CSHL1-204ENST00000392824 EVA1CP58658 441 aa22.2■■□□□ 1.14
CSHL1-204ENST00000392824 PANK3Q9H999 370 aa22.2■■□□□ 1.14
CSHL1-204ENST00000392824 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
CSHL1-204ENST00000392824 ABCA3Q99758 1704 aa22.2■■□□□ 1.14
CSHL1-204ENST00000392824 FYB1O15117 783 aa22.19■■□□□ 1.14
CSHL1-204ENST00000392824 VPS72Q15906 364 aa22.19■■□□□ 1.14
CSHL1-204ENST00000392824 GJD4Q96KN9 370 aaPredicted RBP22.19■■□□□ 1.14
CSHL1-204ENST00000392824 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
CSHL1-204ENST00000392824 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
CSHL1-204ENST00000392824 ATRNO75882 1429 aa22.18■■□□□ 1.14
CSHL1-204ENST00000392824 GGNBP2Q9H3C7 697 aa22.18■■□□□ 1.14
CSHL1-204ENST00000392824 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
CSHL1-204ENST00000392824 ARHGEF25Q86VW2 580 aa22.17■■□□□ 1.14
CSHL1-204ENST00000392824 STRN4Q9NRL3 753 aa22.17■■□□□ 1.14
CSHL1-204ENST00000392824 PHRF1Q9P1Y6 1649 aaKnown RBP22.17■■□□□ 1.14
CSHL1-204ENST00000392824 SLIT3O75094 1523 aa22.16■■□□□ 1.14
CSHL1-204ENST00000392824 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
CSHL1-204ENST00000392824 CRYBG1Q9Y4K1 1723 aa22.16■■□□□ 1.14
CSHL1-204ENST00000392824 COL14A1Q05707 1796 aaKnown RBP22.15■■□□□ 1.14
CSHL1-204ENST00000392824 AATKQ6ZMQ8 1374 aa22.14■■□□□ 1.14
CSHL1-204ENST00000392824 OVOS2A0A0J9YW53 1432 aa22.13■■□□□ 1.13
CSHL1-204ENST00000392824 OVOS2Q6IE36 1432 aa22.13■■□□□ 1.13
CSHL1-204ENST00000392824 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
CSHL1-204ENST00000392824 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
CSHL1-204ENST00000392824 WASHC2AQ641Q2 1341 aa22.11■■□□□ 1.13
CSHL1-204ENST00000392824 MYOM1P52179 1685 aa22.11■■□□□ 1.13
CSHL1-204ENST00000392824 NWD2Q9ULI1 1742 aa22.09■■□□□ 1.13
CSHL1-204ENST00000392824 AXIN2Q9Y2T1 843 aa22.09■■□□□ 1.13
CSHL1-204ENST00000392824 PLCH1Q4KWH8 1693 aa22.09■■□□□ 1.13
CSHL1-204ENST00000392824 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
CSHL1-204ENST00000392824 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
CSHL1-204ENST00000392824 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
CSHL1-204ENST00000392824 CDK12Q9NYV4 1490 aaPredicted RBP22.08■■□□□ 1.12
CSHL1-204ENST00000392824 CSB-PGBD3P0DP91 1061 aa22.07■■□□□ 1.12
CSHL1-204ENST00000392824 AMPHP49418 695 aa22.07■■□□□ 1.12
CSHL1-204ENST00000392824 USP35Q9P2H5 1018 aa22.07■■□□□ 1.12
CSHL1-204ENST00000392824 CAMTA1Q9Y6Y1 1673 aa22.07■■□□□ 1.12
CSHL1-204ENST00000392824 NFAT5O94916 1531 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms