RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 RTL5Q5HYW3 569 aaPredicted RBP18.84■□□□□ 0.61
SC5D-202ENST00000392789 PLEKHF1Q96S99 279 aa18.84■□□□□ 0.61
SC5D-202ENST00000392789 CT47B1P0C2W7 299 aaPredicted RBP18.83■□□□□ 0.61
SC5D-202ENST00000392789 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.6
SC5D-202ENST00000392789 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
SC5D-202ENST00000392789 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
SC5D-202ENST00000392789 ATP7BP35670 1465 aa18.82■□□□□ 0.6
SC5D-202ENST00000392789 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
SC5D-202ENST00000392789 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
SC5D-202ENST00000392789 TMPOP42166 694 aaKnown RBP18.8■□□□□ 0.6
SC5D-202ENST00000392789 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
SC5D-202ENST00000392789 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
SC5D-202ENST00000392789 CDC42BPGQ6DT37 1551 aa18.79■□□□□ 0.6
SC5D-202ENST00000392789 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
SC5D-202ENST00000392789 BCL2L13Q9BXK5 485 aa18.79■□□□□ 0.6
SC5D-202ENST00000392789 RLBP1P12271 317 aa18.78■□□□□ 0.6
SC5D-202ENST00000392789 IL16Q14005 1332 aa18.78■□□□□ 0.6
SC5D-202ENST00000392789 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
SC5D-202ENST00000392789 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
SC5D-202ENST00000392789 ZKSCAN2Q63HK3 967 aa18.76■□□□□ 0.59
SC5D-202ENST00000392789 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
SC5D-202ENST00000392789 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
SC5D-202ENST00000392789 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
SC5D-202ENST00000392789 TSR2Q969E8 191 aaKnown RBP18.75■□□□□ 0.59
SC5D-202ENST00000392789 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
SC5D-202ENST00000392789 MLECQ14165 292 aa18.74■□□□□ 0.59
SC5D-202ENST00000392789 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.74■□□□□ 0.59
SC5D-202ENST00000392789 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
SC5D-202ENST00000392789 MVPQ14764 893 aaKnown RBP18.74■□□□□ 0.59
SC5D-202ENST00000392789 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
SC5D-202ENST00000392789 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
SC5D-202ENST00000392789 LRRC7Q96NW7 1537 aa18.73■□□□□ 0.59
SC5D-202ENST00000392789 RIPK4P57078 832 aa18.73■□□□□ 0.59
SC5D-202ENST00000392789 DAXXQ9UER7 740 aaPredicted RBP18.73■□□□□ 0.59
SC5D-202ENST00000392789 ZMYM3Q14202 1370 aa18.73■□□□□ 0.59
SC5D-202ENST00000392789 FTSJ3Q8IY81 847 aaKnown RBP18.72■□□□□ 0.59
SC5D-202ENST00000392789 KNDC1Q76NI1 1749 aa18.72■□□□□ 0.59
SC5D-202ENST00000392789 FCHSD2O94868 740 aa18.72■□□□□ 0.59
SC5D-202ENST00000392789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
SC5D-202ENST00000392789 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
SC5D-202ENST00000392789 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
SC5D-202ENST00000392789 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
SC5D-202ENST00000392789 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
SC5D-202ENST00000392789 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
SC5D-202ENST00000392789 FAM135BQ49AJ0 1406 aa18.7■□□□□ 0.58
SC5D-202ENST00000392789 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
SC5D-202ENST00000392789 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
SC5D-202ENST00000392789 NEFMP07197 916 aa18.7■□□□□ 0.58
SC5D-202ENST00000392789 ESF1Q9H501 851 aaKnown RBP18.7■□□□□ 0.58
SC5D-202ENST00000392789 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
SC5D-202ENST00000392789 MAP2P11137 1827 aaKnown RBP18.69■□□□□ 0.58
SC5D-202ENST00000392789 METP08581 1390 aa18.68■□□□□ 0.58
SC5D-202ENST00000392789 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
SC5D-202ENST00000392789 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
SC5D-202ENST00000392789 TECPR2O15040 1411 aa18.68■□□□□ 0.58
SC5D-202ENST00000392789 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
SC5D-202ENST00000392789 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
SC5D-202ENST00000392789 TRIM27P14373 513 aa18.67■□□□□ 0.58
SC5D-202ENST00000392789 CPS1P31327 1500 aa18.67■□□□□ 0.58
SC5D-202ENST00000392789 MON2Q7Z3U7 1717 aa18.67■□□□□ 0.58
SC5D-202ENST00000392789 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
SC5D-202ENST00000392789 SIRT1Q96EB6 747 aa18.66■□□□□ 0.58
SC5D-202ENST00000392789 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
SC5D-202ENST00000392789 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
SC5D-202ENST00000392789 ATF7IPQ6VMQ6 1270 aa18.66■□□□□ 0.58
SC5D-202ENST00000392789 DDX19BQ9UMR2 479 aa18.66■□□□□ 0.58
SC5D-202ENST00000392789 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
SC5D-202ENST00000392789 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
SC5D-202ENST00000392789 SLC4A3P48751 1232 aa18.65■□□□□ 0.58
SC5D-202ENST00000392789 ALDH1L2Q3SY69 923 aa18.63■□□□□ 0.57
SC5D-202ENST00000392789 TXNDC2Q86VQ3 553 aa18.63■□□□□ 0.57
SC5D-202ENST00000392789 USP19O94966 1318 aa18.63■□□□□ 0.57
SC5D-202ENST00000392789 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
SC5D-202ENST00000392789 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
SC5D-202ENST00000392789 TNRQ92752 1358 aa18.63■□□□□ 0.57
SC5D-202ENST00000392789 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
SC5D-202ENST00000392789 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
SC5D-202ENST00000392789 IPO8O15397 1037 aaKnown RBP18.62■□□□□ 0.57
SC5D-202ENST00000392789 FBLN1P23142 703 aa18.62■□□□□ 0.57
SC5D-202ENST00000392789 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
SC5D-202ENST00000392789 CALD1Q05682 793 aaKnown RBP18.62■□□□□ 0.57
SC5D-202ENST00000392789 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
SC5D-202ENST00000392789 NME9Q86XW9 330 aa18.62■□□□□ 0.57
SC5D-202ENST00000392789 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
SC5D-202ENST00000392789 UBR1Q8IWV7 1749 aa18.62■□□□□ 0.57
SC5D-202ENST00000392789 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
SC5D-202ENST00000392789 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
SC5D-202ENST00000392789 C3P01024 1663 aa18.61■□□□□ 0.57
SC5D-202ENST00000392789 HDAC1Q13547 482 aaPredicted RBP18.61■□□□□ 0.57
SC5D-202ENST00000392789 IL13P35225 146 aa18.6■□□□□ 0.57
SC5D-202ENST00000392789 COG3Q96JB2 828 aa18.6■□□□□ 0.57
SC5D-202ENST00000392789 TMEM2Q9UHN6 1383 aa18.59■□□□□ 0.57
SC5D-202ENST00000392789 SEC24BO95487 1268 aa18.59■□□□□ 0.57
SC5D-202ENST00000392789 HMOX1P09601 288 aa18.59■□□□□ 0.57
SC5D-202ENST00000392789 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.56
SC5D-202ENST00000392789 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.56
SC5D-202ENST00000392789 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.56
SC5D-202ENST00000392789 BRPF1P55201 1214 aaPredicted RBP18.57■□□□□ 0.56
SC5D-202ENST00000392789 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
SC5D-202ENST00000392789 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms