RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ERICH6BQ5W0A0 696 aa28.25■■■□□ 2.11
SPHK1-202ENST00000392496 NRKQ7Z2Y5 1582 aa28.25■■■□□ 2.11
SPHK1-202ENST00000392496 RNF123Q5XPI4 1314 aa28.24■■■□□ 2.11
SPHK1-202ENST00000392496 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
SPHK1-202ENST00000392496 ANKARQ7Z5J8 1434 aa28.23■■■□□ 2.11
SPHK1-202ENST00000392496 ACEP12821 1306 aa28.23■■■□□ 2.11
SPHK1-202ENST00000392496 APAF1O14727 1248 aa28.22■■■□□ 2.11
SPHK1-202ENST00000392496 PNPLA6Q8IY17 1366 aa28.22■■■□□ 2.11
SPHK1-202ENST00000392496 NME9Q86XW9 330 aa28.22■■■□□ 2.11
SPHK1-202ENST00000392496 CDCA7LQ96GN5 454 aa28.22■■■□□ 2.11
SPHK1-202ENST00000392496 FMN2Q9NZ56 1722 aa28.21■■■□□ 2.11
SPHK1-202ENST00000392496 RUNDC1Q96C34 613 aa28.2■■■□□ 2.11
SPHK1-202ENST00000392496 USP6P35125 1406 aa28.2■■■□□ 2.1
SPHK1-202ENST00000392496 NUTM2FA1L443 756 aa28.19■■■□□ 2.1
SPHK1-202ENST00000392496 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
SPHK1-202ENST00000392496 TTC21BQ7Z4L5 1316 aa28.18■■■□□ 2.1
SPHK1-202ENST00000392496 COG3Q96JB2 828 aa28.18■■■□□ 2.1
SPHK1-202ENST00000392496 RGPD8O14715 1765 aaPredicted RBP28.18■■■□□ 2.1
SPHK1-202ENST00000392496 MAP2P11137 1827 aaKnown RBP28.17■■■□□ 2.1
SPHK1-202ENST00000392496 NALCNQ8IZF0 1738 aa28.17■■■□□ 2.1
SPHK1-202ENST00000392496 GOLGA2Q08379 1002 aa28.16■■■□□ 2.1
SPHK1-202ENST00000392496 IQSEC2Q5JU85 1478 aa28.16■■■□□ 2.1
SPHK1-202ENST00000392496 POLKQ9UBT6 870 aa28.16■■■□□ 2.1
SPHK1-202ENST00000392496 SSH2Q76I76 1423 aa28.15■■■□□ 2.1
SPHK1-202ENST00000392496 NWD1Q149M9 1564 aa28.15■■■□□ 2.1
SPHK1-202ENST00000392496 IRX6P78412 446 aaPredicted RBP28.14■■■□□ 2.1
SPHK1-202ENST00000392496 U2AF1L5P0DN76 240 aaPredicted RBP28.14■■■□□ 2.09
SPHK1-202ENST00000392496 U2AF1Q01081 240 aaKnown RBP eCLIP28.14■■■□□ 2.09
SPHK1-202ENST00000392496 NCBP3Q53F19 620 aaKnown RBP28.14■■■□□ 2.09
SPHK1-202ENST00000392496 DIAPH1O60610 1272 aaKnown RBP28.13■■■□□ 2.09
SPHK1-202ENST00000392496 ZRANB1Q9UGI0 708 aa28.13■■■□□ 2.09
SPHK1-202ENST00000392496 RCAN3Q9UKA8 241 aa28.13■■■□□ 2.09
SPHK1-202ENST00000392496 TTC21AQ8NDW8 1320 aa28.11■■■□□ 2.09
SPHK1-202ENST00000392496 ADGRL3Q9HAR2 1447 aa28.11■■■□□ 2.09
SPHK1-202ENST00000392496 CDK12Q9NYV4 1490 aaPredicted RBP28.1■■■□□ 2.09
SPHK1-202ENST00000392496 OVOS2A0A0J9YW53 1432 aa28.1■■■□□ 2.09
SPHK1-202ENST00000392496 OVOS2Q6IE36 1432 aa28.1■■■□□ 2.09
SPHK1-202ENST00000392496 SLFN5Q08AF3 891 aa28.09■■■□□ 2.09
SPHK1-202ENST00000392496 PMFBP1Q8TBY8 1022 aa28.09■■■□□ 2.09
SPHK1-202ENST00000392496 DUSP27Q5VZP5 1158 aa28.09■■■□□ 2.09
SPHK1-202ENST00000392496 TCP11L2Q8N4U5 519 aa28.09■■■□□ 2.09
SPHK1-202ENST00000392496 NGDNQ8NEJ9 315 aaKnown RBP28.09■■■□□ 2.09
SPHK1-202ENST00000392496 TRMT2AQ8IZ69 625 aaKnown RBP28.08■■■□□ 2.09
SPHK1-202ENST00000392496 U2SURPO15042 1029 aaKnown RBP28.07■■■□□ 2.08
SPHK1-202ENST00000392496 FBLN1P23142 703 aa28.06■■■□□ 2.08
SPHK1-202ENST00000392496 CCDC27Q2M243 656 aa28.06■■■□□ 2.08
SPHK1-202ENST00000392496 WWC1Q8IX03 1113 aa28.05■■■□□ 2.08
SPHK1-202ENST00000392496 PHF23Q9BUL5 403 aaPredicted RBP28.05■■■□□ 2.08
SPHK1-202ENST00000392496 PNNQ9H307 717 aaKnown RBP28.05■■■□□ 2.08
SPHK1-202ENST00000392496 E9PSI1 815 aa28.04■■■□□ 2.08
SPHK1-202ENST00000392496 EMILIN1Q9Y6C2 1016 aa28.04■■■□□ 2.08
SPHK1-202ENST00000392496 PLEKHF1Q96S99 279 aa28.04■■■□□ 2.08
SPHK1-202ENST00000392496 USP31Q70CQ4 1352 aa28.03■■■□□ 2.08
SPHK1-202ENST00000392496 PPM1GO15355 546 aaPredicted RBP28.03■■■□□ 2.08
SPHK1-202ENST00000392496 RRP1P56182 461 aaKnown RBP28.03■■■□□ 2.08
SPHK1-202ENST00000392496 PELP1Q8IZL8 1130 aaKnown RBP28.03■■■□□ 2.08
SPHK1-202ENST00000392496 PPP4R2Q9NY27 417 aa28.03■■■□□ 2.08
SPHK1-202ENST00000392496 ZNF335Q9H4Z2 1342 aaPredicted RBP28■■■□□ 2.07
SPHK1-202ENST00000392496 FCHSD2O94868 740 aa27.99■■■□□ 2.07
SPHK1-202ENST00000392496 WDR63Q8IWG1 891 aa27.99■■■□□ 2.07
SPHK1-202ENST00000392496 RRP7AQ9Y3A4 280 aaKnown RBP27.99■■■□□ 2.07
SPHK1-202ENST00000392496 SPINK5Q9NQ38 1064 aaPredicted RBP27.98■■■□□ 2.07
SPHK1-202ENST00000392496 MAPK8IP3Q9UPT6 1336 aa27.97■■■□□ 2.07
SPHK1-202ENST00000392496 PIK3C2AO00443 1686 aa27.97■■■□□ 2.07
SPHK1-202ENST00000392496 IL13P35225 146 aa27.97■■■□□ 2.07
SPHK1-202ENST00000392496 RRS1Q15050 365 aaKnown RBP27.97■■■□□ 2.07
SPHK1-202ENST00000392496 PROSER2Q86WR7 435 aaPredicted RBP27.97■■■□□ 2.07
SPHK1-202ENST00000392496 RBM33Q96EV2 1170 aaKnown RBP27.97■■■□□ 2.07
SPHK1-202ENST00000392496 PHF8Q9UPP1 1060 aa27.97■■■□□ 2.07
SPHK1-202ENST00000392496 USP54Q70EL1 1684 aa27.97■■■□□ 2.07
SPHK1-202ENST00000392496 NEUROD2Q15784 382 aa27.96■■■□□ 2.07
SPHK1-202ENST00000392496 LRRC7Q96NW7 1537 aa27.94■■■□□ 2.06
SPHK1-202ENST00000392496 C14orf37Q86TY3 774 aa27.94■■■□□ 2.06
SPHK1-202ENST00000392496 TMPOP42166 694 aaKnown RBP27.93■■■□□ 2.06
SPHK1-202ENST00000392496 RSPH6AQ9H0K4 717 aa27.93■■■□□ 2.06
SPHK1-202ENST00000392496 PEAK1Q9H792 1746 aa27.89■■■□□ 2.06
SPHK1-202ENST00000392496 MARF1Q9Y4F3 1742 aaKnown RBP27.88■■■□□ 2.05
SPHK1-202ENST00000392496 NEFMP07197 916 aa27.88■■■□□ 2.05
SPHK1-202ENST00000392496 NCOA3Q9Y6Q9 1424 aa27.87■■■□□ 2.05
SPHK1-202ENST00000392496 PRKAR2BP31323 418 aa27.87■■■□□ 2.05
SPHK1-202ENST00000392496 ESCO1Q5FWF5 840 aa27.86■■■□□ 2.05
SPHK1-202ENST00000392496 NLRP6P59044 892 aa27.86■■■□□ 2.05
SPHK1-202ENST00000392496 STRCP1A6NGW2 1772 aa27.85■■■□□ 2.05
SPHK1-202ENST00000392496 C19orf44Q9H6X5 657 aa27.85■■■□□ 2.05
SPHK1-202ENST00000392496 TRIM35Q9UPQ4 493 aa27.85■■■□□ 2.05
SPHK1-202ENST00000392496 SBNO1A3KN83 1393 aa27.84■■■□□ 2.05
SPHK1-202ENST00000392496 TMEM94Q12767 1356 aa27.84■■■□□ 2.05
SPHK1-202ENST00000392496 EIF4A2Q14240 407 aaKnown RBP27.83■■■□□ 2.05
SPHK1-202ENST00000392496 MAP3K19Q56UN5 1328 aa27.83■■■□□ 2.05
SPHK1-202ENST00000392496 HMOX1P09601 288 aa27.83■■■□□ 2.05
SPHK1-202ENST00000392496 RIPK4P57078 832 aa27.83■■■□□ 2.05
SPHK1-202ENST00000392496 ABTB2Q8N961 1025 aa27.83■■■□□ 2.05
SPHK1-202ENST00000392496 MYH16Q9H6N6 1097 aa27.83■■■□□ 2.05
SPHK1-202ENST00000392496 IL16Q14005 1332 aa27.82■■■□□ 2.04
SPHK1-202ENST00000392496 FLT4P35916 1363 aa27.82■■■□□ 2.04
SPHK1-202ENST00000392496 KIF24Q5T7B8 1368 aa27.82■■■□□ 2.04
SPHK1-202ENST00000392496 PAK3O75914 559 aaPredicted RBP27.81■■■□□ 2.04
SPHK1-202ENST00000392496 PSME1Q06323 249 aa27.81■■■□□ 2.04
SPHK1-202ENST00000392496 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.81■■■□□ 2.04
SPHK1-202ENST00000392496 RGPD1P0DJD0 1748 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms