RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
SUMO1-203ENST00000392246 JCADQ9P266 1359 aa20.65■□□□□ 0.9
SUMO1-203ENST00000392246 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.9
SUMO1-203ENST00000392246 TNS3Q68CZ2 1445 aa20.64■□□□□ 0.89
SUMO1-203ENST00000392246 LMOD2Q6P5Q4 547 aa20.62■□□□□ 0.89
SUMO1-203ENST00000392246 SSH2Q76I76 1423 aa20.62■□□□□ 0.89
SUMO1-203ENST00000392246 ARHGEF10O15013 1369 aa20.61■□□□□ 0.89
SUMO1-203ENST00000392246 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
SUMO1-203ENST00000392246 ALS2Q96Q42 1657 aa20.61■□□□□ 0.89
SUMO1-203ENST00000392246 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
SUMO1-203ENST00000392246 TTC21BQ7Z4L5 1316 aa20.6■□□□□ 0.89
SUMO1-203ENST00000392246 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
SUMO1-203ENST00000392246 TTC21AQ8NDW8 1320 aa20.6■□□□□ 0.89
SUMO1-203ENST00000392246 ABTB2Q8N961 1025 aa20.59■□□□□ 0.89
SUMO1-203ENST00000392246 NRKQ7Z2Y5 1582 aa20.59■□□□□ 0.89
SUMO1-203ENST00000392246 PANK3Q9H999 370 aa20.58■□□□□ 0.89
SUMO1-203ENST00000392246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.88
SUMO1-203ENST00000392246 COL22A1Q8NFW1 1626 aaPredicted RBP20.57■□□□□ 0.88
SUMO1-203ENST00000392246 SPATA31A6Q5VVP1 1343 aa20.56■□□□□ 0.88
SUMO1-203ENST00000392246 CARD14Q9BXL6 1004 aa20.56■□□□□ 0.88
SUMO1-203ENST00000392246 NUTM2GQ5VZR2 741 aa20.54■□□□□ 0.88
SUMO1-203ENST00000392246 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
SUMO1-203ENST00000392246 NSD3Q9BZ95 1437 aa20.53■□□□□ 0.88
SUMO1-203ENST00000392246 NLRP6P59044 892 aa20.53■□□□□ 0.88
SUMO1-203ENST00000392246 PIK3C2AO00443 1686 aa20.53■□□□□ 0.88
SUMO1-203ENST00000392246 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.87
SUMO1-203ENST00000392246 NME9Q86XW9 330 aa20.52■□□□□ 0.87
SUMO1-203ENST00000392246 NUTM2BA6NNL0 878 aaPredicted RBP20.51■□□□□ 0.87
SUMO1-203ENST00000392246 NUTM2EB1AL46 878 aaPredicted RBP20.51■□□□□ 0.87
SUMO1-203ENST00000392246 PLEKHG5O94827 1062 aa20.51■□□□□ 0.87
SUMO1-203ENST00000392246 NUTM2AQ8IVF1 878 aaPredicted RBP20.51■□□□□ 0.87
SUMO1-203ENST00000392246 MED1Q15648 1581 aaPredicted RBP20.5■□□□□ 0.87
SUMO1-203ENST00000392246 CABLES1Q8TDN4 633 aa20.5■□□□□ 0.87
SUMO1-203ENST00000392246 HAP1P54257 671 aaPredicted RBP20.49■□□□□ 0.87
SUMO1-203ENST00000392246 CGNL1Q0VF96 1302 aa20.49■□□□□ 0.87
SUMO1-203ENST00000392246 USP31Q70CQ4 1352 aa20.49■□□□□ 0.87
SUMO1-203ENST00000392246 FYB1O15117 783 aa20.48■□□□□ 0.87
SUMO1-203ENST00000392246 KNSTRNQ9Y448 316 aa20.48■□□□□ 0.87
SUMO1-203ENST00000392246 ZRANB1Q9UGI0 708 aa20.48■□□□□ 0.87
SUMO1-203ENST00000392246 USP19O94966 1318 aa20.47■□□□□ 0.87
SUMO1-203ENST00000392246 CRYBG1Q9Y4K1 1723 aa20.47■□□□□ 0.87
SUMO1-203ENST00000392246 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
SUMO1-203ENST00000392246 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
SUMO1-203ENST00000392246 ABCA3Q99758 1704 aa20.47■□□□□ 0.87
SUMO1-203ENST00000392246 PER1O15534 1290 aaPredicted RBP20.46■□□□□ 0.87
SUMO1-203ENST00000392246 COG3Q96JB2 828 aa20.46■□□□□ 0.87
SUMO1-203ENST00000392246 MARF1Q9Y4F3 1742 aaKnown RBP20.45■□□□□ 0.86
SUMO1-203ENST00000392246 PHRF1Q9P1Y6 1649 aaKnown RBP20.45■□□□□ 0.86
SUMO1-203ENST00000392246 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
SUMO1-203ENST00000392246 LRP6O75581 1613 aa20.45■□□□□ 0.86
SUMO1-203ENST00000392246 GCP02774 474 aa20.44■□□□□ 0.86
SUMO1-203ENST00000392246 KCNH5Q8NCM2 988 aa20.44■□□□□ 0.86
SUMO1-203ENST00000392246 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
SUMO1-203ENST00000392246 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
SUMO1-203ENST00000392246 ADAMTS2O95450 1211 aa20.43■□□□□ 0.86
SUMO1-203ENST00000392246 MEX3CQ5U5Q3 659 aaKnown RBP20.43■□□□□ 0.86
SUMO1-203ENST00000392246 SLIT3O75094 1523 aa20.43■□□□□ 0.86
SUMO1-203ENST00000392246 DDX10Q13206 875 aaKnown RBP20.43■□□□□ 0.86
SUMO1-203ENST00000392246 NSD2O96028 1365 aa20.41■□□□□ 0.86
SUMO1-203ENST00000392246 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
SUMO1-203ENST00000392246 SOX12O15370 315 aa20.39■□□□□ 0.85
SUMO1-203ENST00000392246 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
SUMO1-203ENST00000392246 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
SUMO1-203ENST00000392246 C8orf37Q96NL8 207 aa20.38■□□□□ 0.85
SUMO1-203ENST00000392246 CPDO75976 1380 aa20.37■□□□□ 0.85
SUMO1-203ENST00000392246 KIAA0232Q92628 1395 aa20.37■□□□□ 0.85
SUMO1-203ENST00000392246 NGLY1Q96IV0 654 aa20.37■□□□□ 0.85
SUMO1-203ENST00000392246 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
SUMO1-203ENST00000392246 NPC1L1Q9UHC9 1359 aa20.37■□□□□ 0.85
SUMO1-203ENST00000392246 NFAT5O94916 1531 aa20.36■□□□□ 0.85
SUMO1-203ENST00000392246 FAM83GA6ND36 823 aa20.36■□□□□ 0.85
SUMO1-203ENST00000392246 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
SUMO1-203ENST00000392246 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
SUMO1-203ENST00000392246 MORC1Q86VD1 984 aa20.34■□□□□ 0.85
SUMO1-203ENST00000392246 COL14A1Q05707 1796 aaKnown RBP20.33■□□□□ 0.85
SUMO1-203ENST00000392246 ZBTB7CA1YPR0 619 aa20.32■□□□□ 0.84
SUMO1-203ENST00000392246 CHRNA2Q15822 529 aa20.32■□□□□ 0.84
SUMO1-203ENST00000392246 FNBP4Q8N3X1 1017 aaPredicted RBP20.32■□□□□ 0.84
SUMO1-203ENST00000392246 LTN1O94822 1766 aa20.32■□□□□ 0.84
SUMO1-203ENST00000392246 FBLN1P23142 703 aa20.32■□□□□ 0.84
SUMO1-203ENST00000392246 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
SUMO1-203ENST00000392246 AFF2P51816 1311 aa20.31■□□□□ 0.84
SUMO1-203ENST00000392246 AATKQ6ZMQ8 1374 aa20.3■□□□□ 0.84
SUMO1-203ENST00000392246 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
SUMO1-203ENST00000392246 TNNT2P45379 298 aaPredicted RBP20.3■□□□□ 0.84
SUMO1-203ENST00000392246 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
SUMO1-203ENST00000392246 SLIT2O94813 1529 aa20.3■□□□□ 0.84
SUMO1-203ENST00000392246 PLCH1Q4KWH8 1693 aa20.3■□□□□ 0.84
SUMO1-203ENST00000392246 NWD2Q9ULI1 1742 aa20.29■□□□□ 0.84
SUMO1-203ENST00000392246 RRS1Q15050 365 aaKnown RBP20.29■□□□□ 0.84
SUMO1-203ENST00000392246 BTG4Q9NY30 223 aa20.29■□□□□ 0.84
SUMO1-203ENST00000392246 USP21Q9UK80 565 aa20.28■□□□□ 0.84
SUMO1-203ENST00000392246 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
SUMO1-203ENST00000392246 COL18A1P39060 1754 aa20.28■□□□□ 0.84
SUMO1-203ENST00000392246 AMPHP49418 695 aa20.27■□□□□ 0.84
SUMO1-203ENST00000392246 LMO7Q8WWI1 1683 aa20.27■□□□□ 0.84
SUMO1-203ENST00000392246 ZNF772Q68DY9 489 aaPredicted RBP20.27■□□□□ 0.83
SUMO1-203ENST00000392246 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.83
SUMO1-203ENST00000392246 ABCC6O95255 1503 aa20.26■□□□□ 0.83
SUMO1-203ENST00000392246 IP6K1Q92551 441 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms