RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 ACEP12821 1306 aa22.59■■□□□ 1.21
IGHV3-23-201ENST00000390609 PLEKHG3A1L390 1219 aa22.59■■□□□ 1.21
IGHV3-23-201ENST00000390609 LMOD2Q6P5Q4 547 aa22.59■■□□□ 1.21
IGHV3-23-201ENST00000390609 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
IGHV3-23-201ENST00000390609 PAK3O75914 559 aaPredicted RBP22.57■■□□□ 1.2
IGHV3-23-201ENST00000390609 TOPAZ1Q8N9V7 1692 aa22.55■■□□□ 1.2
IGHV3-23-201ENST00000390609 PLEKHG5O94827 1062 aa22.55■■□□□ 1.2
IGHV3-23-201ENST00000390609 ATRNO75882 1429 aa22.55■■□□□ 1.2
IGHV3-23-201ENST00000390609 SPATA31A3Q5VYP0 1347 aa22.55■■□□□ 1.2
IGHV3-23-201ENST00000390609 CCDC125Q86Z20 511 aa22.54■■□□□ 1.2
IGHV3-23-201ENST00000390609 POLR3AO14802 1390 aaPredicted RBP22.53■■□□□ 1.2
IGHV3-23-201ENST00000390609 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
IGHV3-23-201ENST00000390609 PUS7Q96PZ0 661 aaKnown RBP22.53■■□□□ 1.2
IGHV3-23-201ENST00000390609 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
IGHV3-23-201ENST00000390609 SBNO1A3KN83 1393 aa22.52■■□□□ 1.2
IGHV3-23-201ENST00000390609 TNS3Q68CZ2 1445 aa22.51■■□□□ 1.19
IGHV3-23-201ENST00000390609 SLC12A5Q9H2X9 1139 aa22.51■■□□□ 1.19
IGHV3-23-201ENST00000390609 HAP1P54257 671 aaPredicted RBP22.48■■□□□ 1.19
IGHV3-23-201ENST00000390609 COL22A1Q8NFW1 1626 aaPredicted RBP22.47■■□□□ 1.19
IGHV3-23-201ENST00000390609 HDGFL2Q7Z4V5 671 aaPredicted RBP22.47■■□□□ 1.19
IGHV3-23-201ENST00000390609 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
IGHV3-23-201ENST00000390609 ZNF692Q9BU19 519 aaPredicted RBP22.47■■□□□ 1.19
IGHV3-23-201ENST00000390609 ARHGEF10O15013 1369 aa22.47■■□□□ 1.19
IGHV3-23-201ENST00000390609 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
IGHV3-23-201ENST00000390609 TERF2IPQ9NYB0 399 aa22.46■■□□□ 1.19
IGHV3-23-201ENST00000390609 SRCAPQ6ZRS2 3230 aa22.46■■□□□ 1.19
IGHV3-23-201ENST00000390609 NUTM2GQ5VZR2 741 aa22.45■■□□□ 1.18
IGHV3-23-201ENST00000390609 CABLES1Q8TDN4 633 aa22.45■■□□□ 1.18
IGHV3-23-201ENST00000390609 KTN1Q86UP2 1357 aaKnown RBP22.45■■□□□ 1.18
IGHV3-23-201ENST00000390609 USP6P35125 1406 aa22.45■■□□□ 1.18
IGHV3-23-201ENST00000390609 ABTB2Q8N961 1025 aa22.44■■□□□ 1.18
IGHV3-23-201ENST00000390609 TRPM3Q9HCF6 1732 aaPredicted RBP22.44■■□□□ 1.18
IGHV3-23-201ENST00000390609 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
IGHV3-23-201ENST00000390609 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
IGHV3-23-201ENST00000390609 CPSF1Q10570 1443 aaKnown RBP22.41■■□□□ 1.18
IGHV3-23-201ENST00000390609 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
IGHV3-23-201ENST00000390609 A0A1W2PP64 1363 aa22.39■■□□□ 1.18
IGHV3-23-201ENST00000390609 TTC21BQ7Z4L5 1316 aa22.39■■□□□ 1.18
IGHV3-23-201ENST00000390609 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.17
IGHV3-23-201ENST00000390609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.39■■□□□ 1.17
IGHV3-23-201ENST00000390609 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
IGHV3-23-201ENST00000390609 C11orf95C9JLR9 678 aaPredicted RBP22.38■■□□□ 1.17
IGHV3-23-201ENST00000390609 ALS2Q96Q42 1657 aa22.38■■□□□ 1.17
IGHV3-23-201ENST00000390609 MARF1Q9Y4F3 1742 aaKnown RBP22.37■■□□□ 1.17
IGHV3-23-201ENST00000390609 NLRP6P59044 892 aa22.37■■□□□ 1.17
IGHV3-23-201ENST00000390609 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
IGHV3-23-201ENST00000390609 AKAP12Q02952 1782 aa22.36■■□□□ 1.17
IGHV3-23-201ENST00000390609 BLMP54132 1417 aaPredicted RBP22.36■■□□□ 1.17
IGHV3-23-201ENST00000390609 SSH2Q76I76 1423 aa22.36■■□□□ 1.17
IGHV3-23-201ENST00000390609 TTC21AQ8NDW8 1320 aa22.35■■□□□ 1.17
IGHV3-23-201ENST00000390609 SF3B2Q13435 895 aaKnown RBP22.35■■□□□ 1.17
IGHV3-23-201ENST00000390609 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
IGHV3-23-201ENST00000390609 DEFB132Q7Z7B7 95 aa22.34■■□□□ 1.17
IGHV3-23-201ENST00000390609 EDC4Q6P2E9 1401 aaKnown RBP22.33■■□□□ 1.17
IGHV3-23-201ENST00000390609 MON2Q7Z3U7 1717 aa22.32■■□□□ 1.16
IGHV3-23-201ENST00000390609 NME9Q86XW9 330 aa22.32■■□□□ 1.16
IGHV3-23-201ENST00000390609 EP400Q96L91 3159 aa22.32■■□□□ 1.16
IGHV3-23-201ENST00000390609 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
IGHV3-23-201ENST00000390609 SLIT2O94813 1529 aa22.31■■□□□ 1.16
IGHV3-23-201ENST00000390609 GLI3P10071 1580 aa22.3■■□□□ 1.16
IGHV3-23-201ENST00000390609 SEPT12Q8IYM1 358 aa22.3■■□□□ 1.16
IGHV3-23-201ENST00000390609 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.3■■□□□ 1.16
IGHV3-23-201ENST00000390609 NRKQ7Z2Y5 1582 aa22.29■■□□□ 1.16
IGHV3-23-201ENST00000390609 SOX12O15370 315 aa22.29■■□□□ 1.16
IGHV3-23-201ENST00000390609 ZC3H6P61129 1189 aaKnown RBP22.29■■□□□ 1.16
IGHV3-23-201ENST00000390609 USP19O94966 1318 aa22.28■■□□□ 1.16
IGHV3-23-201ENST00000390609 PIK3C2AO00443 1686 aa22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 MYOM1P52179 1685 aa22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 ZBTB7CA1YPR0 619 aa22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 GCP02774 474 aa22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 PANK3Q9H999 370 aa22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 PRDM11Q9NQV5 511 aa22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.16
IGHV3-23-201ENST00000390609 ABCA3Q99758 1704 aa22.26■■□□□ 1.15
IGHV3-23-201ENST00000390609 VPS72Q15906 364 aa22.26■■□□□ 1.15
IGHV3-23-201ENST00000390609 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
IGHV3-23-201ENST00000390609 FAM83GA6ND36 823 aa22.25■■□□□ 1.15
IGHV3-23-201ENST00000390609 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
IGHV3-23-201ENST00000390609 NSD3Q9BZ95 1437 aa22.24■■□□□ 1.15
IGHV3-23-201ENST00000390609 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
IGHV3-23-201ENST00000390609 BRWD3Q6RI45 1802 aa22.24■■□□□ 1.15
IGHV3-23-201ENST00000390609 KIAA0232Q92628 1395 aa22.24■■□□□ 1.15
IGHV3-23-201ENST00000390609 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 CHRNA2Q15822 529 aa22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 KCNH5Q8NCM2 988 aa22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 COG3Q96JB2 828 aa22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 PHRF1Q9P1Y6 1649 aaKnown RBP22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 USP31Q70CQ4 1352 aa22.23■■□□□ 1.15
IGHV3-23-201ENST00000390609 GGNBP2Q9H3C7 697 aa22.22■■□□□ 1.15
IGHV3-23-201ENST00000390609 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
IGHV3-23-201ENST00000390609 FYB1O15117 783 aa22.2■■□□□ 1.14
IGHV3-23-201ENST00000390609 BTG4Q9NY30 223 aa22.2■■□□□ 1.14
IGHV3-23-201ENST00000390609 SLIT3O75094 1523 aa22.2■■□□□ 1.14
IGHV3-23-201ENST00000390609 A0A0G2JS52 829 aa22.19■■□□□ 1.14
IGHV3-23-201ENST00000390609 BAG6P46379 1132 aa22.19■■□□□ 1.14
IGHV3-23-201ENST00000390609 MYT1Q01538 1121 aa22.19■■□□□ 1.14
IGHV3-23-201ENST00000390609 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
IGHV3-23-201ENST00000390609 PSDA5PKW4 1024 aaPredicted RBP22.18■■□□□ 1.14
IGHV3-23-201ENST00000390609 OVOS2A0A0J9YW53 1432 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms