RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 USP6P35125 1406 aa13.15□□□□□ -0.3
TRBV11-1-201ENST00000390367 PSME1Q06323 249 aa13.15□□□□□ -0.3
TRBV11-1-201ENST00000390367 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
TRBV11-1-201ENST00000390367 MTHFSP49914 203 aa13.14□□□□□ -0.31
TRBV11-1-201ENST00000390367 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
TRBV11-1-201ENST00000390367 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
TRBV11-1-201ENST00000390367 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
TRBV11-1-201ENST00000390367 NME9Q86XW9 330 aa13.12□□□□□ -0.31
TRBV11-1-201ENST00000390367 AKAP12Q02952 1782 aa13.12□□□□□ -0.31
TRBV11-1-201ENST00000390367 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
TRBV11-1-201ENST00000390367 MON2Q7Z3U7 1717 aa13.11□□□□□ -0.31
TRBV11-1-201ENST00000390367 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
TRBV11-1-201ENST00000390367 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
TRBV11-1-201ENST00000390367 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
TRBV11-1-201ENST00000390367 ILDR1Q86SU0 546 aaPredicted RBP13.1□□□□□ -0.31
TRBV11-1-201ENST00000390367 NGEFQ8N5V2 710 aa13.1□□□□□ -0.31
TRBV11-1-201ENST00000390367 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
TRBV11-1-201ENST00000390367 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
TRBV11-1-201ENST00000390367 NEFMP07197 916 aa13.09□□□□□ -0.31
TRBV11-1-201ENST00000390367 NLRP6P59044 892 aa13.09□□□□□ -0.31
TRBV11-1-201ENST00000390367 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
TRBV11-1-201ENST00000390367 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
TRBV11-1-201ENST00000390367 USP31Q70CQ4 1352 aa13.08□□□□□ -0.31
TRBV11-1-201ENST00000390367 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
TRBV11-1-201ENST00000390367 ADAMTS8Q9UP79 889 aa13.08□□□□□ -0.32
TRBV11-1-201ENST00000390367 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
TRBV11-1-201ENST00000390367 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
TRBV11-1-201ENST00000390367 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
TRBV11-1-201ENST00000390367 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
TRBV11-1-201ENST00000390367 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
TRBV11-1-201ENST00000390367 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
TRBV11-1-201ENST00000390367 FOXO3O43524 673 aa13.06□□□□□ -0.32
TRBV11-1-201ENST00000390367 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
TRBV11-1-201ENST00000390367 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
TRBV11-1-201ENST00000390367 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
TRBV11-1-201ENST00000390367 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
TRBV11-1-201ENST00000390367 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
TRBV11-1-201ENST00000390367 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
TRBV11-1-201ENST00000390367 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRBV11-1-201ENST00000390367 MST1RQ04912 1400 aa13.05□□□□□ -0.32
TRBV11-1-201ENST00000390367 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
TRBV11-1-201ENST00000390367 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
TRBV11-1-201ENST00000390367 SLAIN2Q9P270 581 aa13.04□□□□□ -0.32
TRBV11-1-201ENST00000390367 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
TRBV11-1-201ENST00000390367 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
TRBV11-1-201ENST00000390367 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 AMPHP49418 695 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
TRBV11-1-201ENST00000390367 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
TRBV11-1-201ENST00000390367 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
TRBV11-1-201ENST00000390367 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
TRBV11-1-201ENST00000390367 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
TRBV11-1-201ENST00000390367 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
TRBV11-1-201ENST00000390367 SBNO1A3KN83 1393 aa13□□□□□ -0.33
TRBV11-1-201ENST00000390367 FCHSD2O94868 740 aa13□□□□□ -0.33
TRBV11-1-201ENST00000390367 RRS1Q15050 365 aaKnown RBP13□□□□□ -0.33
TRBV11-1-201ENST00000390367 SOX12O15370 315 aa12.99□□□□□ -0.33
TRBV11-1-201ENST00000390367 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
TRBV11-1-201ENST00000390367 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
TRBV11-1-201ENST00000390367 FLT4P35916 1363 aa12.98□□□□□ -0.33
TRBV11-1-201ENST00000390367 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
TRBV11-1-201ENST00000390367 APAF1O14727 1248 aa12.97□□□□□ -0.33
TRBV11-1-201ENST00000390367 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
TRBV11-1-201ENST00000390367 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
TRBV11-1-201ENST00000390367 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
TRBV11-1-201ENST00000390367 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
TRBV11-1-201ENST00000390367 RTL1A6NKG5 1358 aa12.96□□□□□ -0.33
TRBV11-1-201ENST00000390367 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
TRBV11-1-201ENST00000390367 NEFLP07196 543 aa12.96□□□□□ -0.33
TRBV11-1-201ENST00000390367 FBLN1P23142 703 aa12.96□□□□□ -0.33
TRBV11-1-201ENST00000390367 IL13P35225 146 aa12.96□□□□□ -0.33
TRBV11-1-201ENST00000390367 TOM1O60784 492 aa12.95□□□□□ -0.34
TRBV11-1-201ENST00000390367 GCP02774 474 aa12.95□□□□□ -0.34
TRBV11-1-201ENST00000390367 PIK3C2AO00443 1686 aa12.95□□□□□ -0.34
TRBV11-1-201ENST00000390367 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 CCDC27Q2M243 656 aa12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 IP6K1Q92551 441 aa12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
TRBV11-1-201ENST00000390367 SPATA31A3Q5VYP0 1347 aa12.93□□□□□ -0.34
TRBV11-1-201ENST00000390367 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
TRBV11-1-201ENST00000390367 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
TRBV11-1-201ENST00000390367 EIF4A2Q14240 407 aaKnown RBP12.93□□□□□ -0.34
TRBV11-1-201ENST00000390367 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
TRBV11-1-201ENST00000390367 XIRP1Q702N8 1843 aaKnown RBP12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 USP19O94966 1318 aa12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 HOXC9P31274 260 aa12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
TRBV11-1-201ENST00000390367 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms